Pogoniulus pusillus (red-fronted tinkerbird): 135184025
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Entry
135184025 CDS
T10504
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03013
Nucleocytoplasmic transport
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135184025 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
135184025 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135184025 (THOC2)
03041 Spliceosome [BR:
ppus03041
]
135184025 (THOC2)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135184025 (THOC2)
Spliceosome [BR:
ppus03041
]
Complex C
Other components
EJC/TREX
135184025 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135184025 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
135184025
NCBI-ProteinID:
XP_064015560
LinkDB
All DBs
Position
19:17105465..17155327
Genome browser
AA seq
1594 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKNEFVQLCRVLSENKSHDSMVFRDIQQALYELAYHVVRGNLKH
DQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNTIIEEHKREI
MEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKSIAVALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKDKMELLFSCL
LSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKA
QTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKY
LTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQY
VANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTK
KSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGF
LASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQ
HKVHKYITACELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREV
NKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNW
LLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSD
IIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGN
KADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQA
LERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQN
GPGGAGMPASLTVNTVRLEEGATEETDKLKEKSQGVVKVINKAVNAAPKVTTSNGNSASN
SKIIKEKDEKEKSGKEKDKEKKDKTPTATPEAKALGKDGKEKPKEERANKDDKAREIKEK
TPKSDKEKEKVKKEEKASKEEKSKTVVTIVESKSTAEKEREKEPSRERDVAKEMKSKENV
KGGEKVPVAGSLKSPVPRSEASESEREQKRRKIDTHSSPSHSSTVKDNLNELKDSSAKHY
INHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNNEREVPQDSTKR
RKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKSDSIKAEKMEKSSSGSKK
ESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctccccgccgagtggataaagaactgggagaaagggggcaagaacgag
tttgtgcagctatgtcgtgtgcttagtgaaaacaaaagccatgatagtatggttttcaga
gacatccagcaggctttgtatgagcttgcataccatgtcgtcagaggaaacttaaagcat
gaccaagcttctaatgttcttggtgatgtcatagaatttcgggaagacatgccttccatc
ctagctgatgtattctgcatattagatattgaaacaagttgtttagaagagaaaagtaag
agggatcactttacccaactggtattagcttgtttgtatcttgtatctgacactgtccta
aaggagcgtttagatccagagacactagagtcattgggacttatcaagcagtctcaacag
ttcaaccagaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaat
ttgttaagagaggagaatgaaggttatgcaaagctcattgcagaactggggcaagaccta
tctggaaatatcactagtgatttaatccttgaaaatattaagtctttaataggttgtttt
aaccttgatcctaacagagttttggacattatcttagaagtctatgagtgcaggcctgag
tatgatgacttctttgtaccgctgatagagtcttacatgtacatgtgtgaacctcaaact
ctatgccacatccttgggttcaaattcaaattctatcaggatccaagtggtgagacacct
tcctccttatacagagttgctgctgtccttctgcaacataatctcatagatttggaagat
ctttacgttcaccttcttccgggggataataccatcattgaggagcataagcgagagatc
atggaagccaagcaaattgttagaaaacttacgatggtcgtcttatcctcggaaaagact
gaggaaaaggaaaaggaaaaagagaaagaggaggagaaaactgaaaagcctcctgacaat
cagaagcttggtttattggaagctttattaaaaattggtgattggcagcatgcacaaagt
attatggatcagatgcctccattttatgctacttcacacaagtcgattgcagttgccctt
tgccagcttgtacatgtgacaattgaacctctgtaccgcagggttggtgtacctaaagga
gctaaaggctcaccaatttcttctttgccaaacaagagagcaccaaaacaagcagacagc
tttgaggacttgaggaaggaggtgttcaacatgctttgttatcttggtcctcacctctcg
catgatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatgaaagagttt
cagtctgatggaagcaaacaagaagataaagacaaaatggagctactctttagctgttta
ttgagtattactgatcaagtcttacttccatctctgtctttaatggactgcaatgcatgc
atgtctgaagaattatggggaatgttcaaaacatttccataccagtaccggtatcgtctt
tatgggcaatggaagaatgaaacatacaatagtcacccacttctagtgaaagttaaagct
cagactatagatcgagccaaatatatcatgaagcgtttaacaaaggaaaatgtgaaaccc
tctggaagacaaattgggaagctgagccacagcaatcctacaattttatttgattatatt
ttatcacaaatacaaaaatatgacaacttgataactccggttgttgattcactgaaatac
ctcacttcgctgaactatgatgtcttggcatactgtatcattgaagctctggcaaaccct
gagaaggagagaatgaagcatgatgacactacaatctcaagctggcttcagagtctggct
agcttttgtggtgcagttttccgaaaatacccgattgaacttgctggtctgcttcaatat
gtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaagaggtagtg
cagaaaatggcagggatagaaattacagaagaaatgacaatggaacagttggaagccatg
actggtggagagcaactaaaagctgagggtggatactttggccaaatcagaaatacaaaa
aaatcttctcagagactgaaagatgcattactggaccatgatcttgcccttccattgtgc
ctgcttatggctcaacagagaaacggtgtgatctttcaggagggtggggaaaaacatctg
aagctggtgggaaaactgtatgatcagtgccatgacaccctagtacaatttggtgggttc
ttagcatccaatctgagcacagaggattacattaagcgagtgccttctattgatgttctc
tgtaatgaattccacacacctcacgatgctgcatttttcctctcaagacccatgtatgca
catcatatttcatcaaagtatgatgaactaaagaaagctgagaagggaaataaacagcaa
cacaaagttcataaatatataacagcgtgtgagctggtgatggctcctgttcatgaagct
gtgatttctctgcaccttcccaaagtttgggatgacatcagtcctcagttttatgctaca
ttctggtctttgacaatgtacgaccttgccgttccacatagtagctacgacagagaagtc
aacaaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaa
aagaaaaaagaaaaagaacgttgcacagctcttcaggacaagctccttgaagaggagaag
aagcagttggaacatgtgcagagggttctacagaggctgaaactagagaaggataactgg
cttctggcaaagtctaccaaaaatgagactatcacaaaattcttgcagttgtgtatattt
cctcgatgcattttttctgcaatcgatgcagtgtattgtgctcacttcgtagaactggtg
catcagcagaaaacacccaacttctccacgcttctctgctatgacagagttttctctgat
attatatatacggttgcaagttgcactgaaaatgaagctagtagatatggcaggttttta
tgctgtatgttggagactgtgactagatggcacagtgacagagtcatatatgaaaaggaa
tgtggcaactatccaggcttcctgactatattacgggccactggatttgatggtggaaat
aaagctgatcaattggattatgagaattttagacatgtagtacacaaatggcactataaa
ttaactaaggcatctgtgcactgccttgaaacaggagaatatacgcatatcagaaatatc
ctgattgtgctgaccaaaatccttccatggtatccaaaagtgctgaacctgggccaagcc
ttggaaagaagagtacataagatatgtcaagaagagaaagagaagagacccgatctatat
gcattggctatgggctattctgggcagttgaaaagtaggaagcctttcatgatacctgaa
aatgaattccaccacaaagatccacctgccaggaatgctgtacctgcaacagtacaaaat
gggccaggtggtgctgggatgcctgcatctctcacagtaaatacagttagactggaagaa
ggcgctactgaggagactgataaactaaaggagaagtctcagggtgtggtgaaagttatt
aataaagctgtcaatgctgcaccgaaagtgacaacaagcaatggaaacagtgcttctaat
agcaaaattattaaggagaaagatgagaaagaaaaaagtgggaaggaaaaagacaaagaa
aagaaagacaagactccaactgccactccagaggcgaaggcacttgggaaggatgggaaa
gaaaaacccaaggaagaacgggcaaacaaagatgataaagcaagagagatcaaggagaaa
acaccaaaatctgacaaagagaaggaaaaagtcaagaaagaagaaaaagcttcaaaggaa
gagaagtccaagacagttgttaccatcgttgagtcaaagtcaactgcagaaaaggaaaga
gaaaaggagccgtccagagaaagagatgtagcaaaggaaatgaaatccaaggaaaatgtt
aaaggaggcgaaaaggtgccagtagctgggtccttgaagtcacctgttccccgatcagaa
gcatcagaatctgaaagggaacaaaaacgccgcaaaattgatacacattcttctccatca
cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaagcactac
attaaccacactactccaacactgtccaagagtaaggagagagaagtggacaagaaagat
ttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaa
gatcgaaaaagggatcattcaaacaatgaacgagaggtaccacaggattcaactaaacga
cgcaaagaggaaaatgggacaactggttcttcaaaacacagtaaaagtgagagcccttct
gattcccctcgcttaaatgaaaaggagaaggaaaagaacaaatccaaatcttcaggaaaa
gagaaaagtgattcaattaaagcagaaaagatggagaagagctcctctggtagcaaaaag
gagtcaagacatgataaagaaaaaacagaaaaaaaagagaaacgagacagcactggaggg
aaagaggaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
