Pogoniulus pusillus (red-fronted tinkerbird): 135184411
Help
Entry
135184411 CDS
T10504
Symbol
FANCA
Name
(RefSeq) Fanconi anemia group A protein isoform X1
KO
K10888
fanconi anemia group A protein
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
135184411 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135184411 (FANCA)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
135184411 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_CTD
FANCA_helical
Motif
Other DBs
NCBI-GeneID:
135184411
NCBI-ProteinID:
XP_064016212
LinkDB
All DBs
Position
20:complement(10640395..10684732)
Genome browser
AA seq
1432 aa
AA seq
DB search
MAGRGRRTWRDLLAGRARKRKTTFGSEAELRGAVLRLLDHHQSLNDLLLEVEGSVKPAGE
APSESLIASVLQEQASRLGVPPAILAAKIATTNVEQICQASASHSQGPLLSLDQRKRLLC
LLQTVEDLLANNVFCRSRFCQELWRMKDPPVLEAVWHLHRGNILGLGELLESSPAVPAVV
EWLCSSLRGLCELAEDVELTGDVELAGHLLSDLAIVFLQNGFQQNWEPGRRLESKKISSI
CHAVLQRMLTWVLDAVGKEKQEDISVLQAMKFWLNIFRVPVYQSAVHPDAVQQFFRHTLT
EVLTYNPLLKVSDAIHMQKEWSFTRTSSLLTTLYRRLFVVLGVKEAVCQLQQVLETHEVN
WQHVLSCVSTLVVCQAEAEQLFKDLLSQLLLKAFESYDMENLITAFLIARQAALEGPAVF
MPYSEWFKTSFGNAGGQHGSSKKALVFLFEFLSQLVPFEAAPYLKVHIMYPPFVPTKHRS
LLLEYITLAKTRLADLKVAIENMGLYEDLSSTDEPVQPQGQALRDVEKALQIFESTRKIP
TSVIEASIFRRPYYTSWFLPALLQPRVLPRTPDARMAFIEALKRADKIPSNLFSTYTQAC
RALREKTQDESKAESDHSKEPVEQLKAELAELKTLFVDQAKHKDVPAQIAVISDRLTSIL
GHSSDENEAATSNSPIQIDISAPRLEPSHQPVVDLLLTSFCQNLIAASHLNPPDRQGPCL
SLLVKMMCGHRNLLPALLGRLCQLIYHQALSLNDAHILGLAAFVIHLSESRALIPAVEAN
FGISQPVPGQALSILEYWNCLLVCRTQESFVFCMRFCTAAASYLMCKYSSSSREDLSALL
PPGLVKKLQYLVPHLCLEARGILCQEAQTDPIWSCLSCPSLSSRRASLSLWRQARFQELL
KEKAFQLSFREWLLWELEVFPEKDVLSASERHDFHYWAIYQCYLPAPSASGGCDGDLEKA
CGIIINTTLDSLQRSDLGCCGQSKMWINPDILCRLQELVLELGCRQKFFAGCRDSQRHFL
FKILQERLKDRKAGSALGKELWRQQELLLHRRLLVGLPASSLIMTCQKGRRTVLDCEDFF
HFVNSELKNSCSRGYALPYDITAHFFRGLLNASLDCEEPAVVVNHVLAACQSQCPILLPS
AALWWPRLEPVICSQWKRLFGAPLAEELERLREQHSSATSFLSSGAVFSPSGPPWISAAF
LHCTIHQEAPRRREKATLERLGSGTEQARLAKLLVSLLFLSLMDLVSAKIAPKEGVHFQT
ALEWSLEILQCLEDRSVSWPPLFHPAERDPGKSHILRRAASERHSRLLPLAFYSLTPGFH
HELLTREQSFLYMALDLYIQLLQLFVEGKDLPQPDQTAQSPEPTEHGDPLEVISTARRFL
LGAIPRCHAQSFTSIQPLLATCEKLDAELAATLVHFSRPSTAMELDEELILF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaggggccgcaggacgtggcgggatctgctcgcagggagagccaggaagcga
aaaaccacctttgggagcgaagcagagctccggggagcagttctgcgcctcctggatcac
catcagagcctgaatgacctcctcctggaggtggaaggttcagtcaagccagctggggaa
gcaccgtcagaatcacttatagcctctgttctgcaggagcaagcctcgaggttgggtgtc
cccccagccatcctggcagccaaaattgccactaccaacgttgagcagatctgccaggct
tctgcgagtcattctcaaggcccactgctgagcttggaccagaggaagagattgttgtgc
ttgcttcagaccgtcgaggatctgctggcaaacaatgtgttctgtcgctcccgcttctgc
caggagctgtggagaatgaaggaccctccagtgctggaagctgtgtggcacctgcacaga
ggcaatatccttggcctgggagagctgctggagagcagcccagcggtccctgccgtggtg
gagtggctgtgcagcagcctccgggggctctgcgagctggcggaggatgtggagctcacc
ggggatgtggagcttgccgggcaccttctctcagacttggcaattgtgtttctccagaat
ggctttcagcagaattgggagccggggaggaggttggaatccaaaaagatctcctctatt
tgccatgctgtcctgcagaggatgttgacatgggtgcttgatgctgttggtaaggagaag
caagaagacatttctgtgctgcaagctatgaagttctggttgaacatcttcagggtgcct
gtttaccagagtgctgtgcatcccgatgccgttcagcagttcttcaggcacaccctgact
gaggttcttacctacaaccctttgttgaaagtgtctgatgccatccatatgcagaaggag
tggagcttcacacgaactagctcgctgctgacgaccctgtatcgcagactgttcgtggtg
ttgggtgtgaaggaggcagtctgccagctgcagcaagtgctggagacccacgaggtgaac
tggcagcacgtcctgtcctgtgtttccacgctggtggtctgtcaggctgaggctgagcag
ctcttcaaagatctgctgagccagctcctgctaaaggcctttgagagctacgacatggag
aacctgatcacagccttcctgatagctcgtcaggctgctctggagggccctgctgtcttc
atgccctactctgagtggtttaagacttcctttgggaatgctggtggtcagcatgggagc
agcaagaaagctctggtcttcctctttgagttcttgtcacagcttgtgccctttgaggca
gctccatacttgaaggtccatatcatgtatcccccgtttgtgccgaccaagcatcgctcc
ctcctcttggagtacatcaccctggctaagactaggctggctgacctcaaagttgcaata
gaaaacatggggctctatgaagacttgtcttccacagatgaacctgtgcagccccagggc
caggccctccgtgatgttgagaaggcacttcagatctttgagagcacgaggaagatccca
acgtctgtgatagaagccagtattttcaggagaccttattacacttcttggtttcttcct
gctttgctccagccccgtgtgctgccaagaaccccagacgctcgcatggctttcatagag
gctttgaagagggctgataaaatcccctccaacttgttctctacgtacacacaagcctgt
cgtgctctgagagagaaaacacaagatgaatcaaaagcagagagtgaccattccaaagag
cctgtggagcagctgaaggctgaactggctgagctgaaaacactgtttgtggaccaggct
aaacataaagatgtgccagcacagattgctgtgatttctgacagactcacaagcattttg
ggccacagcagtgatgagaatgaagctgctacttcaaattctccaatccaaatagacatt
tctgcccccaggctggagcccagccatcagcctgtggttgatcttctgctgacatcattc
tgccaaaacctaattgctgcttcccatttgaaccctcctgacaggcagggaccatgcctc
tccttgttggtgaagatgatgtgtggacacaggaatctcttacctgcactcctgggcagg
ctctgccagcttatttaccaccaggctctttccctgaatgatgctcacattctaggacta
gcagcttttgtgatccacttgagtgagtccagagctctaatccctgcagtggaagccaat
tttgggatttctcagcctgttcctgggcaggccctttccattttggagtattggaactgt
ttgctggtgtgcaggacccaggagtcgtttgtcttctgcatgaggttctgcactgctgca
gcatcttatctcatgtgcaagtattcctcctcttctcgtgaagacctgagtgctttgctt
cctcctggcctcgttaagaagctccagtacctcgtgccccacctgtgcttggaggctcga
gggatcctgtgccaggaggctcagactgaccccatctggagttgcctgtcctgtccctcg
ctcagctccagaagagccagcctctctttatggaggcaagcacgcttccaagagctcctg
aaggaaaaagcattccagttgtctttcagggagtggctgctgtgggagctggaagtgttc
cctgagaaggatgttctctctgcttcagagagacatgatttccattactgggctatctac
cagtgctatcttcctgcaccttctgcttctgggggctgcgatggagacctggagaaggca
tgtggcattattatcaataccactctggattccttacaaaggtcggacctggggtgctgt
ggccagtcgaagatgtggatcaaccctgacattctctgcaggctgcaggagttggtgctg
gagctgggctgcaggcaaaagttctttgctggctgcagggatagccagagacacttccta
ttcaagattcttcaggagaggctgaaggacagaaaagctggttctgctctgggtaaggag
ctgtggaggcagcaggagctgctgctgcacagaaggcttctggtagggctccctgcatcc
tctctgatcatgacgtgtcaaaaaggaaggagaactgtgttggactgtgaagacttcttt
cattttgtaaactcagagctgaagaacagctgctccagagggtatgcactcccctacgac
atcactgctcacttcttcaggggcctgcttaatgccagcttggactgcgaggaaccagca
gtggtggtcaaccacgtcctagcagcctgtcagagccagtgtcccatcctgcttccctcc
gcagcgctgtggtggccaaggctggagccagtgatctgctcacagtggaagaggctcttt
ggggctccacttgcagaagagctggaaaggctgagggaacagcactcctcagccaccagc
ttcctttcctcaggagcagttttttctccctctggccctccttggatttcagctgccttc
ctccactgcactattcaccaggaggcaccacgaagaagggagaaagcaacactggagagg
ctggggagtggcacagagcaggcaagactggccaagcttcttgtgtccctgctcttcttg
tccctcatggatctcgtctcggcaaaaatagcaccgaaggagggagtgcactttcagaca
gctctggaatggtccctggagatcttgcagtgcctggaagacagaagtgtgtcctggcca
cctctcttccacccagcagagcgagaccctgggaaatctcacatcctgcgcagggcagcc
tcggaacgtcacagccggctcctgcctcttgccttctacagcctcacccctggctttcac
catgagctgctcaccagagaacagagcttcctctacatggcacttgatctgtacatccag
ctgctgcagctcttcgtggaggggaaagacctgccccagcctgaccaaacagcacaaagc
ccagagcccacggagcatggggatcccttggaagtgatctccacggcccggcggttcctg
cttggtgcgatcccgcggtgccatgcccagagcttcacaagcatccaaccgctcctggcc
acatgtgaaaaacttgatgcagagctggcagccactcttgtgcacttctcaagaccttcc
acagccatggagctggacgaagagctgatcctcttctga
DBGET
integrated database retrieval system
