Pogoniulus pusillus (red-fronted tinkerbird): 135184426
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Entry
135184426 CDS
T10504
Name
(RefSeq) B-cadherin isoform X1
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135184426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppus04515
]
135184426
Cell adhesion molecules [BR:
ppus04515
]
Cadherins
Major cadherins
135184426
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
135184426
NCBI-ProteinID:
XP_064016246
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Position
20:10751891..10757879
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AA seq
883 aa
AA seq
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MRRLRSGLCPLFILLSIVLSSLPPAAASPPTRPCVPSGLRRRPLPAPASSGACAGPYGTE
EGNVGVQKDGERRQLPGVGSGLAVSPLDIAPLRDVTLRPGFAPVALRSRRSPQELPEARA
APRRRKRDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTI
EKESGWMKVTQPLDRERIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVF
RGSVPEGALPGTSVMQVTATDADDAVETYNGVIAYSILSQEPREPHPHMFTVNRATGTLS
VIASGLDREVGARQYHRGGQPWYQAMGLTKCPFVCLPQRVRQYTLTVQAADLDGEGLTTT
ALAVIEIADVNDNAPEFDPKTYKAAVPENEAGQEVARLVVTDLDEPNTPAWRAVYSILRG
NEGGAFTIATDPASNEGVLRTTKGLDYEAKKQFVLHVAVTNEAPFAVKLPTATATVTVNV
EDVNEAPIFDPPVRFAQVPEDVPPGQTLTSCTAQDPDKAQGQRIKYLVGHDPAGWLAVHP
ENGLVTARDHLDRESPFAKNSTYTAMLLAVDDGSPPATGTGTLLLTLLDVNDHGPEAEPR
DITICNRSPQPQILTVTDRDLPPNTGPFRAELTHGSGDSWAVEVGDEDDTVTLRLVAPLE
PDLYSVYLRLLDRPGKAQLTIITARVCDCEGPAQGCPQRRQPATALPFILAGLGALLALL
LILLLLLLFVRRRKVTKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDLRQLHRGLDARPE
VLLRNDVAPTLLPAPQYRPRPANPDDIGTFIEENLKAADTDPTAPPYDSLLVFDYEGSGS
EATSLSSLNSSDSDRDQDYDYLNDWGSRFKKLADLYGGGEDDD
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggctgcgctccgggctctgcccgctcttcatcctcctcagcatcgtcctctct
tcgctcccgccggcggccgcatcccccccgacccgaccgtgcgtcccctcggggctgcgc
cggaggccgctcccggcaccagccagctctggagcctgcgcggggccgtatgggactgag
gagggaaatgtcggggtgcaaaaggatggagaacgcaggcagctgccgggggtgggcagc
gggctcgctgtgtcccccctggatattgcccctctccgggatgtcactcttcggccaggc
tttgctccagttgctttgcggagcagacgctccccccaggagcttcccgaggctcgtgct
gctcccaggagacggaagagggactgggtgattccccccatcaaggttcctgaaaatgag
aggggtcccttccccaaaaagctggttcagatcaaatccaaccgggacagagacactaaa
atcttctacagcatcacggggcagggagcagatgctcccccggagggcatcttcaccatt
gagaaggagtcgggctggatgaaggtgacgcagccgctggaccgggagcgcatcgacaag
taccatcttttctcccacgccgtgtcagagaatggcaaaccagtggaggagccgatggag
atcatagtcacagtcacagaccagaacgacaacaagcctcagttcacacaggaggtcttc
aggggctccgtgcccgaaggcgctttgccgggcacctccgtgatgcaggtgacagccacg
gacgcagacgatgcagtggagacctacaacggtgtcatcgcctactccatcctcagccag
gagccgcgcgagccccatccccacatgttcaccgtcaaccgggccaccggcaccctcagc
gtcatcgccagcggccttgaccgagaggtgggggctaggcagtaccataggggtgggcag
ccctggtaccaggccatgggactgacaaagtgtccatttgtctgtctgccgcagcgcgtg
cggcagtacacactgacagtgcaggcagccgacctggacggcgaggggctgaccacaaca
gcgctggccgtgatcgagattgcagatgtcaatgacaacgcccctgagtttgaccccaaa
acgtacaaggcagcggtaccagagaatgaggccgggcaggaggtggcacggctggtcgtc
actgacctggatgagccaaacacgccggcctggcgagctgtctactccatcctgcgtggc
aatgagggaggtgccttcaccattgccactgatcctgccagcaacgagggtgtcctccgc
accaccaagggtctggactacgaggccaagaagcagttcgtgctccatgtagctgtcacc
aatgaggccccttttgctgtcaagctgccgacagccactgcaacggtgactgtcaatgta
gaggacgttaatgaggcacccatctttgacccaccagtgcggtttgcccaggtgccagag
gatgtgccaccagggcagaccctcacctcctgcactgcccaggaccccgacaaagcccag
ggacagaggatcaagtacctggtgggacatgaccctgcaggctggctggctgtgcaccct
gagaatggcttagtgacagcacgggaccacctggaccgtgagtcccccttcgccaagaac
agcacctacaccgccatgctgctggctgtggacgatggctcaccacccgccacgggcact
ggcaccctgctcctcaccctgcttgatgtgaacgaccatggccctgaggccgagccacgg
gacatcaccatctgcaaccgcagtccccagccccagatcctcactgtcactgacagggac
ttgccacccaacactggccccttccgcgccgaactcacccatggttcaggggacagctgg
gccgtggaggtcggcgatgaagacgacacagtcacgctgcgcctggtggcaccactggag
ccagacctctacagcgtctacctgcggctcctcgaccgcccgggcaaagcccagctcacc
atcatcactgcgcgggtctgcgactgtgaggggccagcgcagggctgtccccagaggcgc
cagcctgccactgccctgcccttcatccttgctggccttggtgctctcctggctttgctg
ctcatcctgctgctgctgctgctctttgtgaggaggaggaaggtgaccaaggagccactg
ctgctgcctgaggatgacacacgggacaacgtcttctattatggggaggaaggtggtggt
gaggaggaccaggactatgacctgcggcagctgcaccggggtctagatgctcgtcctgag
gtgctgctgcgcaacgatgtggcccccaccctcctgccagccccccagtaccggcctcgg
cctgccaaccctgacgacattggtaccttcattgaggagaacttgaaggcggccgacaca
gaccccacagcgcccccctatgactccctgctggtgtttgactacgagggcagcggctca
gaggccacctcgctcagctccctcaactcttccgactccgaccgcgaccaggactacgac
tacctcaacgactggggcagccgcttcaagaagctggctgacctctatggtgggggggag
gatgacgattag
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