Pogoniulus pusillus (red-fronted tinkerbird): 135184428
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Entry
135184428 CDS
T10504
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135184428 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppus03009
]
135184428 (UTP4)
Ribosome biogenesis [BR:
ppus03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135184428 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR3_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
WD40_Gbeta
Frtz
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
135184428
NCBI-ProteinID:
XP_064016251
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All DBs
Position
20:10804754..10810550
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AA seq
686 aa
AA seq
DB search
MGEFEVHRVRFFGLVPAGVRCLAHQSRGGRLALARTDGAVEIYNFGANYFQEKVIPGHET
RSVEALCWAAGDRLFGAGLSGNITEYDLARLCVSHSVDGCGGPIWSMEANGSGTQLAIGC
EDGSVKLYQVVPGGIQFEQNLDRRKGRILCLSWHPSGSHIVAGSIDTFRVLDVSSGTTVQ
TVMVNYHVQKVKRECIVWSIAFLSSGTVITSDSFGRVQFWGWEQGTLQESYTVSASPALS
LAVSESEDSLIVGTSTGATYQFQLLPVKMDSQEKRWVRTKPFQYHTHDVRAVAHSSTALI
SGGLDAQLVIRPLMEKVGKKGYDVALRRFTFPHRRLVSCARKARLLLFQFSQHLELWRLG
STEETGKDGEVLPLCRMPEHLVQLKSKGPEHIYCSCVSPCGSWVAYSTASRFHLCQVQCE
GSNISVKKVPKVPKLLLPAYQLQFSSNSRRLFIGSARGSVHILQLLEPGHCAHLHTFQPP
SGSPEAVYLLASSADGLWLAAVGGDWVIHIYNLKYLKYHCTVPMYNCAVTALAIHPLINT
LVIAYSDQQLFEFSILKKKYTSWSRMVQQRGLHKAWLERDAPITHITFNPKKPSHILLHD
LYMFCVLDKSLPLPKNSTLLMNQNTLKQLPETARKQELHAFKICKKFQPLLFVDLLDENS
LVVVERPIMDFKTQLPLPIQQKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagttcgaggtgcaccgggtgcggttcttcgggctggtgccggccggggtgcgc
tgcctggcccaccagtcccgcggcggccgtctggctctggcgcgcaccgacggcgccgtc
gagatctacaacttcggggccaactacttccaggagaaggtgatccctgggcatgagacg
cggtcggtggaagcgctgtgctgggcggcaggagaccgtctgtttggtgctggccttagc
gggaacatcactgagtatgacctggcccggctgtgtgtctcccactcggttgatggctgc
gggggccctatctggagcatggaggccaatggcagtggcacccagctggcgattggctgt
gaggatggctctgttaagctctaccaagttgttcccggtggcatccagtttgagcagaac
ctggacaggcggaaaggacgcatcctgtgcctctcctggcacccgtcgggctctcacata
gtggctggctccattgacacgttccgtgtgttagacgtctcttcaggcacaacagtgcag
acggtcatggtgaattaccacgtgcagaaggtgaagcgtgagtgcattgtgtggagcatt
gccttcctctccagcggcaccgtcatcacctcagactcctttgggagggtgcagttctgg
ggctgggagcaagggacattgcaggagtcctacaccgtcagtgcctcgcctgccctctcg
ctggctgtgtcagagagtgaggacagcctgatcgtgggcacctccactggtgccacctat
cagttccagctgctgccggtgaagatggacagccaggagaagcgctgggtgcgcacaaag
cccttccagtatcacacccatgatgtgcgagctgtagctcacagctccacagctctcatc
tctggaggcctggatgcacagctggtgatccgcccgctgatggagaaggttggcaagaag
ggctacgatgtagccctccgcagattcaccttcccacaccgacgccttgtctcctgtgcc
aggaaagcccggctgcttctcttccagttctcccagcacctggagctctggagacttggc
tccactgaggagactggaaaggacggtgaggtccttcccttgtgccgcatgcctgagcac
ctcgtgcagcttaagagcaagggtccagagcacatctactgcagctgtgtctcaccctgc
ggcagctgggttgcctactccacagcctcccgcttccacctctgtcaagtgcagtgcgag
ggcagcaatatcagcgttaagaaggtccccaaagtgcccaagttgctgctcccagcctac
cagctccagttctcctccaactctcgcaggcttttcattggctccgctcgaggctccgtc
cacatcctgcagctcctggagccagggcactgtgcacatctgcacacatttcagccaccc
tcagggtcccccgaggctgtttacctgctggcatcaagtgctgatgggctttggctggct
gcagttggtggggactgggtgatccatatctacaacctgaaatacttaaagtatcactgc
acagtgcccatgtacaactgcgccgtgacagccctcgccatccaccccctcatcaacacc
ctggttattgcctactcggaccagcagctgtttgagttcagcatcctcaagaagaagtac
acgtcctggagccgcatggtgcagcagcgcgggctgcacaaggcctggctggagagagat
gcgcccatcacccacatcaccttcaaccccaagaaaccctcacacatcctgctccatgac
ctctacatgttctgtgtcctcgacaagtccctgcccttgccgaaaaatagtaccctcctg
atgaaccagaacactctgaagcagctcccagagactgcccggaagcaggagctccacgcc
ttcaagatctgcaagaagttccagcccctgctgtttgtggatctgttggatgagaactcc
ctcgtggtggtggagcgacccatcatggacttcaagacccagctgcccctgcccatccaa
caaaagaaatttggcacctga
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