Pogoniulus pusillus (red-fronted tinkerbird): 135184598
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Entry
135184598 CDS
T10504
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135184598 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppus03021
]
135184598 (SF3B3)
03041 Spliceosome [BR:
ppus03041
]
135184598 (SF3B3)
03036 Chromosome and associated proteins [BR:
ppus03036
]
135184598 (SF3B3)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
135184598 (SF3B3)
Spliceosome [BR:
ppus03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135184598 (SF3B3)
Complex B
135184598 (SF3B3)
Complex C
U2 SnRNP specific factors
135184598 (SF3B3)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
135184598 (SF3B3)
TFTC complex
135184598 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
135184598
NCBI-ProteinID:
XP_064016605
LinkDB
All DBs
Position
20:21016126..21073676
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSSTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacctgacgctgcagcgtgccactggcataagctacgccatccatggc
aacttctcaggaaccaaacaacaagaaatcgtcgtctcccggggcaagatcctggagctg
ctccgccccgatcccaacacggggaaggttcacaccttgctgacggtggaggtgtttgga
gtcatccgctccctcatggccttcaggctgacaggtggcaccaaagactacatcgtggtg
ggcagtgactcaggtcgaattgtcatcctggagtaccaaccctccaagaacgtctttgag
aagatccatcaggagacctttggcaagagcggctgccgcaggatcgttccgggccagtac
ctggctgtggaccccaagggccgtgctgttatgatcagtgccattgagaagcagaagctg
gtgtatatcctgaacagagacgctgctgctcgcctcaccatttcctcccccctggaagct
cacaaggccaatactttggtttaccacgtggtgggagttgatgtgggatttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggagaagca
gcagccaacacacagcagactttgactttttatgagctggacctgggcttgaaccacgtt
gttaggaagtacagtgagcccctagaagagcatggcaactttcttatcacagttcctggt
ggttctgatggccctagtggggtgctgatctgttctgagaactacatcacttacaagaac
tttggtgaccagcctgatatcagatgtcccattcccaggagaaggaacgacttggatgac
ccagagagaggaatgatatttgtctgctctgccacacacaaaaccaagtccatgttcttc
ttcttggcccagacagagcagggagacatcttcaaaattactctggagactgatgaggat
atggtgacagagatccgactgaagtactttgacaccgttcctgtggctgctgccatgtgt
gtgctgaaaacagggtttctttttgtggcatctgagtttggaaaccattacctgtaccag
atagctcacctgggtgatgatgatgaggagccagagttctcttctgcaatgcctcttgag
gaaggagataccttcttctttcagccacgacctctcaagaacctggtgctggtggatgag
ctggacagtttatctcctattctgtgctgtcagattgctgatctggccaatgaagacaca
ccccagctctatgtggcttgtggtcgagggcctcggtcatctctgagggttttaaggcat
ggacttgaggtttctgaaatggctgtctcagagctgcctggtaaccccaatgctgtatgg
accgtcaggagacacgttgaagatgaatttgatgcctatatcatcgtgtccttcgtcaac
gccacgctggtgctgtccattggagagactgtagaagaagtgactgactctggcttcctg
ggtacaacacccaccttgtcctgctcccttcttggggatgatgctttggtccaggtctat
ccagatgggatcaggcatatccgagcagataagagagtcaacgagtggaagaccccaggg
aagaaaaccattgtgaagtgtgctgtgaaccagagacaagtggtgatagcactgactgga
ggagagctggtgtactttgagatggacccatcaggacagctcaacgagtacacagagagg
aaggagatgtcagcagatgtggtctgcatgagcctggccaatgtgccccccggggagcag
cgctctcgcttcctggccgtggggctggtggacaacacagtcaggatcatctcccttgac
ccttcggactgcctccagcctctcagcatgcaggccctgcctgcccagcccgagtcgctc
tgcatcgtggagatgggtggcacagagaagcaggatgagctgggggagagaggctccatt
ggcttcctctacctgaacattggcctgcagaacggtgtcctgttgaggactgtcctggat
cctgtgactggagacctgtcagacaccaggaccaggtaccttggctcccggcccgtcaag
ctcttccgcgtccgcatgcaaggccaggaggcggtgctggccatgtcgagccgctcctgg
ctcagttactcctaccagtcacgcttccacctgacccccctctcttatgagacactggag
tttgcatctggctttgcttctgagcagtgcccagagggcattgtagccatctccacaaac
acactgaggattttggcactggagaagctgggggcagtcttcaaccaggttgctttcccc
ttgcagtacacaccccgaaagtttgtcattcatccagagagcaacaacctgatcatcatt
gagacagaccacaatgcttacactgaggccaccaaggcacagaggaagcagcagatggct
gaggaaatggtggaggctgcaggtgaagatgagagggagctggctgctgagatggctgca
gccttcctgaatgaaaacctgcctgaatccatctttggtgctcccaaggcagggaatggc
caatgggcttctgttatcagggtgatgaaccccatccagggaaacacattggatctggtc
cagctggagcagaacgaagctgccttcagcgtggccgtgtgccgcttctccagcaccggg
gacgagtggtacgtgctggtgggggtggccaaggacctcatcctgaaccctcgctctgtt
gctggagggtttgtctacacctacaagctggtgaacagtggtgagaaactggaattcctg
cacaagacccctgtggaggaggttcctgcagccattgctcccttccaaggcagagtcttg
attggagttggaaagctgctgcgtgtgtatgacctgggcaagaagaagctgctccgcaag
tgtgagaacaagcacattgccaactacatctgtggcatccaaaccattgggcacagggtg
attgtttcagacgttcaggagagcttcatctgggtgcgctacaagcggaacgagaaccaa
ttgatcatcttcgccgacgacacctacccgcgctgggtcaccactgccaccctcctggac
tatgacaccgtggctggagcagacaagtttggcaacatctgtgtggtgagattgccaccc
aacaccaacgatgaggtagatgaggatcccacaggcaacaaagcactctgggacagaggg
ctgcttaatggagcatcacagaaggctgaagtgatcatgaattaccacgtgggagagact
gtgctgtccttgcagaagaccacactcatcccaggaggctctgagtctcttgtctacacc
accctgtcaggaggaataggaattttggtcccatttacttcccacgaggatcatgacttc
ttccagcacgtggagatgcacctgaggtcggagcatccccctctgtgcggccgagaccac
ctcagcttccgctcctactacttcccggtgaagaatgtgatcgatggggacctgtgtgag
cagttcaactccatggaacccaacaaacagaagaatgtggctgaagaactggaccggacc
ccacctgaggtgtccaagaagctggaggacatccgcactcgctatgctttctga
DBGET
integrated database retrieval system
