Pogoniulus pusillus (red-fronted tinkerbird): 135184664
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Entry
135184664 CDS
T10504
Symbol
EDC4
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135184664 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
135184664 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135184664
NCBI-ProteinID:
XP_064016763
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Position
20:complement(23264906..23317701)
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AA seq
1395 aa
AA seq
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MASSSSIDIEDATQHLRDILKLDRPAGSVNENQRPSNSYNGDLNGLLVPDPIAAADGPSL
AKPAHRSVALGALQEKQVICLSGDDSSTCVVISAKDVEVVASSDSSITSKARGSNKVKIK
PVARYDWEQKYYYGNLIAVSNSYLAYAIRGAMVRVMSISTAERILLKGFVGGVADLAFAH
LNSTQLACLDEAGNLFVWRLAMEKDKIQEEILVNIKRPEGTPLNASRRIIWCPFIPDDSE
ESIEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLSEGALS
PDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPF
WRFLITGADQNREMKMWCTVSWTCLQTVHFSPDIFSSMSILPSLKVCLDLSAEYLILSDV
QRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDN
LCVEGAQGAEAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDVSASMPAHGSQEDFAF
PDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVLADFLSLSNDAKPKLMTPDAFMTPSA
SLQQLAVSPGSSVSSLTAVTTISSTSATDTSMPRPSEDLTVSPKMQLDTSLTLSSSSSSL
QTSPRSHSVLLPGLPDKLTPKAPVPVAQGNPSLDLELQEVEPLVVPQASPTRERSPDVIS
SASTAMSQDIPEIASETLQRSFAAPAGLTAEVLEPHADSMASAASALHLLSPRNRHGSEH
GHHTLDMAAVEVDRLNAPSLLETALTQESTAPDSVGTQPWPAAPDITRETRNSMADSPRD
EVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKD
WKAKGSPRASPKLKRKGKKDDGDVNQSPRSSNNNQVTAEFQEELMCILRSQQRELSELRQ
NQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRVLTEGQQRNGQLQEHLSQQ
LTQSLSTALYNRLERTIREELKKTIPQCISKSMDPVAGQLSNNLAAKLTAVEGTLKESIT
KLVKSKNLTDSIVRATADTLQGPIQAAYRESFQSVVLPAFEKSCQAMFQQINDTFKQGTQ
EYIQQLETHLKNKRLREQEARDPLLNQLRQLAGSLQSTTEQLASSVAASVHTELQHQLHV
IVGNMQETILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHLDFQSQQT
HILQMLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQQPCPLSQPVLLSLIQQLS
SDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMSQVRQKLFQFLQVEPHNSLSKPAR
RLMIMLQGLVTPGMT
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctccagcatcgacatcgaggacgctacccagcacctgcgggacatcctc
aagctggaccgaccagcaggctcagtgaatgagaaccagaggccatcgaactcatacaac
ggagacctgaacgggctgctggtgcctgatcccattgccgctgcggatggaccttctctg
gccaagccagcacaccgcagcgttgctctgggagccctgcaggagaagcaagtcatctgc
ctctcaggtgatgacagctccacttgtgtggtgatatcagcaaaagatgtggaggtcgtg
gccagcagtgactccagcatcaccagtaaggccagagggagtaacaaggtgaaaataaag
cctgtggccagatacgactgggagcagaaatactactatggcaatctgatagctgtctca
aactcctacctggcctatgccatcagaggtgccatggtgcgggtgatgagcatcagcacg
gccgagcggatcttgctgaagggcttcgtgggtggtgtggcagacctggcctttgctcac
ctcaactccacccagctggcctgcctggatgaggctgggaacctttttgtgtggcgcctg
gccatggagaaggacaagatccaagaggaaatcctggtgaacatcaagcgccctgagggc
acacccctgaacgcctcccgcaggatcatctggtgccccttcatccccgatgacagcgag
gagagcatcgaggagggcagccagaccttggctttgctgcacgaggacagggcagaggtg
tgggatttggatatcatccgaaccaacaacagctcctggcccgtggaagtgcctagcatc
aaggaaggcttcatcgtagtgaaaggccacagcacgtgcctgagcgagggagctctttct
ccagatgggactgtgctggccacagcaagccatgatggctttgtcaagttctggcagatc
tacatcgaggggcaggacgagccaagatgtctccatgagtggaagccccacgatggtcgc
cctctgtcctgtctgctcttctgtgacaaccacaaaaaacaggacccagaggttcccttc
tggagattcctcatcactggagcagatcagaacagagaaatgaagatgtggtgcacagtg
tcctggacctgcctgcagactgtccacttttctcctgacatcttcagctccatgagcatt
cttcccagcctgaaagtctgcctggacctctctgctgaatacctgatcctgagcgatgtg
cagagaaaagtcttgtatgtgatggagctgatgcagaaccaagaggagggtaaagcttac
ttcagctccatctcggagttccttctcacccacccagtcctaagctttggcatccaggcc
gtgagccgctgtcggttgaggcacaccgaggtactcccagcagaagaggaaaatgacaac
ttgtgtgtggaaggagcccagggggctgaggctgttgaatcagcagcaggcgtgctgata
aaactcttctgtgtgcacaccaaagccctgcaggatgtgcagatcagattccagcctctc
cacagccctgatgtgagtgcatctatgcctgcccatggctctcaggaagactttgccttc
ccagaccacatggctgatctcagcacagaaggactgggatctgagaagggatctgtgcat
ggctcccaaccagacctgcggcgcatcgcagacctgcctgtcctggcagacttcctgtcc
ctctcaaatgatgccaaaccaaagctgatgactccagatgcattcatgacaccaagtgca
tctcttcagcagctcgctgtgtccccgggcagcagcgtcagctccctgactgcagtcaca
accatcagcagcacctctgccactgacacctccatgccaaggccatcagaagacctgact
gtgagccccaagatgcagctggacaccagcctcacactgagtagcagcagcagcagcctc
cagaccagtcccaggagccattctgtcctgctccctggtctccctgacaagctgacacca
aaggcccccgttccagtcgcacaaggaaacccttccttggacctggaactgcaggaggtg
gagcccttggtggtgcctcaggcttctcccacccgcgagcgctcgccggacgtcatctcc
tctgcttccacagccatgtcccaggacatccccgagatcgcttctgagaccctgcagcgc
agcttcgccgctccagctgggctgaccgcagaggtgctggagccccacgcagacagcatg
gcctcggccgcctccgccctgcacctgctgtccccccgcaaccgccacggctctgagcac
ggccaccacaccctggacatggctgctgtggaggtggacaggctgaatgcaccctcgctg
ctggagactgctctgactcaggaaagcactgcccccgacagcgtgggcacacagccctgg
ccagcagcccccgacatcacccgtgagaccaggaacagcatggcagacagcccaagggat
gaggttgaagagaagcataagagctcttcctaccatcgccacagctaccacctgctgcag
catgacagccaggatgccagtgcagaacaaagtgaccatgatgacgaagttgccagcttg
gcttctacctcaggtggatttggtgccaaggcgtccacgcagaggctccctgtgaaggac
tggaaggccaagggctcccctcgggcctctcccaagctgaagcgcaagggcaagaaggac
gatggggatgtgaaccagtcaccaaggtcttccaacaacaaccaggtgacagctgagttc
caggaggagctgatgtgcatcctaaggagccagcagcgggagctctccgagctgcgtcag
aaccagatggagctgctgcagagactcacagaccaccttgatgccattcagagctctctc
atgggccatgtggagagggtgattgactcccagcaggagcaggagcagaggagactggac
cgggtgctgacagaggggcagcagcgcaacgggcagctgcaggagcacctgtcccagcag
ctcacccagtccctctccactgcgctctacaaccgcctggagaggaccatccgcgaggag
ctgaagaagaccattccacagtgcatttccaagagcatggaccctgttgctggccagctg
agtaacaacttggctgccaagctcactgctgtagagggcacactgaaggaaagcatcacc
aagctggtaaagtccaagaaccttactgatagcatcgtgagggcgacagctgacaccctg
cagggccccatccaggcagcctacagagagtccttccagagtgtggtgctgccagccttc
gagaagagctgccaggccatgttccagcagatcaatgacaccttcaagcagggcacgcag
gaatatatccagcagcttgagactcacctgaagaacaagaggctccgagagcaggaggcc
cgggacccgctgctgaaccagctgcggcagctggcgggcagcctgcagagcaccacggag
cagctggcgtcgagcgtggctgccagcgtccacactgagctgcagcaccagctgcacgtc
atcgtgggcaacatgcaggagactatcttggcccaggtgcagagagtgatcaaaggagag
gtgagtctggccatgaaggagcagcaggcagctgtcacctccagcatcgtccaggccatg
cgctctgccgctggcactcccatcccctccacccacctggatttccaatcccagcaaacc
cacatcctccagatgctccagcagggacacctcaaccaggctttccagcaggctctgacc
gcagcagatctcaacctggtgctgtacgtctgtgagactgtggacactcagcaggtgttt
gggcagcagccctgtcccctgtcccagcctgtgctgctctccctcatccagcagctctcc
tcggacctgggtacacgcacggagctgaagctgaattacttggaggaagctgtgatgcac
ctggaccacagtgaccccatcacccgggaccacatgggctcagtcatgagccaggtgcga
cagaagctcttccagttcctgcaagtggaacctcacaactccctgagcaagcctgcacgg
cgcctcatgatcatgctgcagggcctggtcacccctggcatgacctag
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