Pogoniulus pusillus (red-fronted tinkerbird): 135184872
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Entry
135184872 CDS
T10504
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppus03016
]
135184872 (CDKAL1)
Enzymes [BR:
ppus01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
135184872 (CDKAL1)
Transfer RNA biogenesis [BR:
ppus03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
135184872 (CDKAL1)
Prokaryotic type
Methylthiotransferases
135184872 (CDKAL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
135184872
NCBI-ProteinID:
XP_064017129
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All DBs
Position
21:14976902..15412573
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AA seq
581 aa
AA seq
DB search
MPAACDSVLEDIEDMVSAEDLKPQDRQFVRKNVFPKVRKRRSQNRQADEDPPSDSIIPGV
QKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNSI
KKAQEGNKKVVVAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKK
DNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVSRAK
QSFQEGVCEIWLTSEDTGAYGKDIGTDLPTLLWKLVEVIPEGAMMRLGMTNPPYILEHLE
EMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDII
CGFPGETDEDFQETVKLVEQYRFPSLFINQFYPRPGTPAAKMHQVPAAVKKQRTKDLSQL
FHSYSPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEAG
KHFMKGQLVSDARVYTASITKPLAKGEVSGLREEFRHAPQNGTNWKANSSAQTSVKTPLS
SWLTLQLPWQQEGDGLKILSVSLALLAVFVTFYYGVMKTEW
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgcgattcagtgctggaagacattgaggatatggtgtcagcagaagat
ttgaaaccgcaggatcggcagtttgtgagaaagaatgtcttcccaaaagtgcgaaaacgc
cgctcacaaaacaggcaggcagacgaggatcccccaagtgacagcattatccctggtgtt
cagaaaatctggatccgtacatggggatgttctcacaataattcagatggcgaatatatg
gctggacagctggctgcctatggatacaaaattacagacaactctgctgaagcagattta
tggttgttgaacagttgtacagtgaaaaatcccgctgaggaccacttcagaaactcaatc
aagaaagcccaagaagggaataagaaagtggttgtagcaggctgtgtgccacaggcccag
cctcgtcaggactacctgaaaggcttgagtatcataggggttcagcagatagaccgtgta
gtagaagttgtggaggaaactataaaaggtcattctgtgagattgctgggtcagaaaaag
gataatggaaaacgtttggggggagctcgactggatttgccaaagattaggaagaatccg
ctgatagaaattatttccatcaatacagggtgtctcaatgcatgtacctattgcaaaacg
aagcatgccagaggagatctagcaagctacccaattgaagagctggtgagcagagccaaa
cagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggcttat
ggcaaagacattggcacagacctccctacgcttctgtggaagctggttgaagttattcct
gagggagctatgatgaggcttggcatgacaaaccctccatatattttagagcatctggag
gaaatggcgaagattctcaatcacccaagagtctatgcctttctgcacataccagtccag
tcagcttctgacagtgtgctcatggacatgaaaagagaatattgtgtagcagacttcaaa
caagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatcatc
tgtggttttccaggagagacagatgaagattttcaagaaacagtgaaacttgtggaacag
tacagatttcccagcttgtttattaatcaattttacccacgcccaggaactccagctgca
aaaatgcatcaagttccagctgcggtgaaaaaacagagaacaaaggatctgtcccagctg
tttcattcatacagtccatatgatcataaggttggtgagaggcagagagttctggtaaca
gaagaatcctttgattccaattactatgttgctcacaatcccttctatgagcaggttctt
gtgccaaaagatcccctgctaatgggtaagatggtagaagtgaatatttatgaagctggg
aaacattttatgaaggggcagctagtgtcagatgccagagtttacactgcatccatcacc
aagccgctggcaaaaggagaagtttctggtttaagagaggagttcaggcatgcgccacag
aacggcacaaactggaaagcaaactcttctgctcagacctcagtgaaaacaccactcagc
tcatggctgactttgcagcttccatggcaacaagaaggggatggactgaagatactgtct
gtcagcctggctctgcttgccgtttttgttacgttttactacggagtaatgaaaacagag
tggtga
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