Pogoniulus pusillus (red-fronted tinkerbird): 135185098
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Entry
135185098 CDS
T10504
Symbol
PCDH12
Name
(RefSeq) protocadherin-12 isoform X1
KO
K16499
protocadherin delta 2
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppus04515
]
135185098 (PCDH12)
Cell adhesion molecules [BR:
ppus04515
]
Cadherins
Protocadherins
135185098 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
135185098
NCBI-ProteinID:
XP_064017541
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All DBs
Position
22:complement(3282340..3298329)
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AA seq
1139 aa
AA seq
DB search
MLLLSRSALQLPAFWWYLFLSADAQEVATFTVQYRVFEEVPPGTVIGTLAEHFEGGESGD
TSDTFQLMETPGRFPLRVDSGDGALSTAGRVDREQLCRHSDACWVSFDVLAARNLALIHV
EVQVLDVNDNAPRFPTPELELEISESASLRTRIPLDRALDADAGPNARCSYALTPSEHFA
LEVVPSSDGTWHAELVVVKEVDRELHSSFDLVLTATDHGEPPRSGTALIKVTVLDSNDNS
PVFAESSLTVEVREDAPPGTLLVTVTATDPDQGPNGEIEYSLSRHAPPEVLSAFGIDART
GSVVLRRPLDYEETHAYELDVQARDLGANPIPAHCKILVKVLDVNDNAPQVHVTWAGRVP
VLSEALPKDSFVALVTASDPDSGSNGQVHCSLSQGGEHFRLKRTNSHSYVLMTNATLDRE
LRAEYNLTLVVRDQGDLSLAVLKHLTICISDVNDNAPSFERASYEAAVAENSEAPALLLT
VRATDPDLGFNGKITYSILDASASGLVSIDPATGELFALQAFDYEQVRQLEFLVAAEDAG
HPKLASNVSIRLAVLDRNDNAPVITTPALVGGVAALSVLVNAETGCFWVVPGNGSAQGTV
AVPNATLVSCAGTPLLFTIVASDVDSGINGALRYDLVGGDDVGLFILDPLLGQVFLNASN
ASSLAGSERELVVRVSDGGDVPLHTLARLRLVFRRHGSFSKISAQDPGWMSSSVLVIICL
AALLGGCLLLLALTLSLRKKEQKDGMAYNCREAEDARRQQQLKKPHRQIQKADIHLVPLL
RGRPREDEPPRSCQEDLPYTTAPAPGSSPQAPLHLTPTLYRTLRNQRTQKDSEEEQETFN
LPILQRRPCQPHRPKTSAKEAVSPPGTPLHCKSLVKPPQGPMGEPLLPPSQPVGAGEPGH
PQPHQQILRSLVRLSLVALAEQSPSGEFAMESPPVQQISQLLSLLHQGQFQPRTNHRGNK
YTAKNGSRAAGLDADCLSTKDSGHGESEAEDRDSESGFELSVQQLVGEELETLLEPQAEL
ALKRLTAADPAWVARLSLPLTSSYKDNIFCPDSPRSPQDEEAARQEQPRTFETFGKGAGA
DSNAAGTRLASTFLSEMSTLFEMILSQKVQAHNETGSGLLRQLSAHGKSLGLEDSTPVV
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgagccgctccgctctccagctgccagccttctggtggtacctcttcctc
tctgccgatgcccaggaggtggccaccttcacggtgcagtaccgggtgttcgaagaagtg
ccgcctggaacggtgatagggacgctggccgagcacttcgaggggggcgagagcggcgac
acgtcggacaccttccagctgatggagacccccggcaggttcccgctgcgggtggacagc
ggggacggggcgctcagcacggccggtagggtggacagggagcagctgtgccggcacagc
gatgcctgctgggtctctttcgacgtgctggccgcccgcaacctggccctgattcacgtg
gaggttcaggtgctggacgtgaacgacaacgcgccgcggttccccacgcccgagctggag
ctggagatctcggagagcgcatccctgcggacacggatcccgctggacagagccctggac
gccgacgccggccccaacgcccgctgctcctacgccctcacccccagcgagcacttcgcg
ctggaggtcgtccccagctctgacgggacgtggcacgcggagctggtggtggttaaggaa
gtggaccgggagctgcactcctccttcgacctggtgctgacggccaccgaccacggggag
ccccccagatcggggactgctctgattaaagtcaccgtcctcgactccaacgataacagc
cccgtcttcgcagagagctccttgacggtcgaggtgcgggaggatgctcctcccgggacc
ctcctcgtgacggtgacggccaccgaccccgaccagggccccaacggggagatcgagtac
agcctgagcaggcacgcaccgccggaggtgctgagcgccttcggcatcgacgcccgcacg
ggcagcgtggtcctgaggcgcccgctggactacgaggagacccacgcctacgagctggac
gtgcaagcccgggacctgggcgccaaccccatcccggcgcactgcaagatcctggtcaag
gtcctggatgtcaacgacaacgctccccaggtccacgtcacctgggccgggagggtgccg
gtgctgtccgaagccctccccaaggacagcttcgtggctctggtgacggccagcgacccc
gactcgggaagcaacgggcaggtgcactgctccctcagccaagggggtgagcacttcagg
ctgaagaggaccaacagccacagctacgtgctgatgaccaacgccacgctggaccgggag
ctgcgcgccgagtacaacctgacgctggtggtgcgggaccagggggacctctccttggct
gtgctgaagcacctcaccatttgcatcagcgatgtcaacgacaacgccccctccttcgag
agggccagctacgaggctgccgtggctgagaacagcgaagcacctgcccttttgctcacc
gtccgtgccaccgaccctgacctgggcttcaacggcaaaatcacctacagcatcctggac
gcctctgcttcgggtctcgtctccatcgaccctgccactggggagctttttgccctccaa
gcttttgattacgagcaggtgaggcagctggagttcctggtggctgcggaggacgctggt
caccctaagctggcatccaacgtctccatcaggctggcagtgctggaccgcaacgacaac
gctcctgtcatcaccacgccggcgctggtgggaggtgtggctgcgctctccgtcctggtg
aacgcagagactgggtgcttctgggtggtgcctgggaatgggagcgcccaggggaccgtg
gcagtgcccaatgcaacactggtgtcgtgtgctggcactcctctcctcttcaccatcgtg
gccagcgatgtggactcgggcatcaacggagctctgcgctatgatctggtgggtggggat
gatgttggcctcttcatcctggaccctctcttggggcaggtcttcctcaatgccagcaat
gccagcagcctggcgggcagcgagcgggagctggtggtgcgggtgagcgatgggggggac
gtgcccctgcacaccctggcacggctccgcttggttttccggcgccacggctccttctcc
aagatctcagcccaggatcccggctggatgagctcctctgtgctggtcattatctgcctg
gctgctctcctgggcgggtgccttctccttttggctttaaccctgtccttgaggaagaag
gagcagaaggatggcatggcctacaactgcagggaggctgaggatgcccgcaggcagcag
cagctcaagaagccacacaggcagatccagaaggcagacatccacctcgtcccgctgctc
cggggccggccccgggaggatgagcctccccgttcctgccaggaggatctgccctacaca
actgccccagcaccaggaagctccccacaagctcctctccacctcactcccactctctac
aggaccctgagaaatcagaggacccaaaaagactcagaggaggagcaagagaccttcaac
ctgcccatcctgcagcgccggccctgccagccccacagacctaaaacttcagccaaggaa
gctgtgagccccccggggacaccactgcactgcaagagcttggtgaagccaccacaggga
cccatgggagagcccctgctgccacccagccagcctgtgggtgctggggagcctgggcac
ccccagccccaccagcagatcctcaggagcctggtccggctgtcgctggtggcgctggca
gagcagagccccagtggggagtttgcaatggagtccccaccagtgcagcaaatctcccag
ctgctctccctgctgcaccagggccagttccagcccaggacaaaccacagggggaacaag
tacacggccaagaacggcagcagggctgcggggctggatgccgactgcctgagcacgaag
gacagcgggcacggcgagagcgaggcggaggatcgcgactcagagagcggctttgagctc
tccgtgcagcagctggtgggggaggagctggagaccctcctggagccacaggcagagctg
gccctcaagaggctgacagctgctgacccagcatgggtggctcggctctccctgcccctc
accagcagctacaaggacaacatcttctgccccgactctccacgttcacctcaggatgag
gaagctgcaaggcaggagcaaccgaggacctttgaaacctttggtaaaggtgctggggct
gactcaaatgctgctgggacgagactggccagcaccttcctctcagaaatgagcaccctc
tttgaaatgattttgtcccagaaggtccaagcgcacaacgagacaggctcagggctcctg
cggcagctgtcggcgcacgggaagagcctgggactggaagacagcactcctgtcgtgtag
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