Pogoniulus pusillus (red-fronted tinkerbird): 135185437
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Entry
135185437 CDS
T10504
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135185437 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppus03041
]
135185437 (DDX46)
Enzymes [BR:
ppus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135185437 (DDX46)
Spliceosome [BR:
ppus03041
]
Complex A
U2 snRNP components
U2 related factors
135185437 (DDX46)
Complex B
135185437 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
135185437
NCBI-ProteinID:
XP_064018268
LinkDB
All DBs
Position
22:complement(22556779..22576175)
Genome browser
AA seq
1044 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRGKREDRRSRSRERDRRRDRSRSRDKRRSR
SRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKSRKAENRSRSKE
KTDGTEVSKEKKKDKDDKEEEKEKDATTNAVATENFDQNKLEEEMRKRKERVEKWREEQR
KKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEV
KEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAMEYS
SEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRL
ELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGI
AKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR
VVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMF
DMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQ
HVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQ
YDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGN
KGYAYTFITEDQARYAGDIIKALELSGNPIPPDLEKLWADFKDQQKAEGKLIKKSSGFSG
KGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGT
SNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQ
APTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARW
KVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITR
LIKEELIRLQNSYQPTNKGRYKVL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggagtccaggcactaccggaagcgctcagcctcccgcggccgctcgggcagc
cgctcccgcagccgctcgccgtccgacaagcgagggaagcgtgaggacaggcgctccagg
agccgggagcgcgaccgccggcgcgacaggtcccgcagcagggacaagaggaggtcccgg
tcccgcgacaggaagcgccaaaggcgttcccgcagcagggagagggagcggagccgagag
aggagaaggtcccgcagccgagagaggaggcgctccaggagcaggagcagaggcagaagg
tctcgatcctccagtcccagcaagagcaggaaagcagagaacagatcaagatctaaagag
aagacagacggaacagaagtttccaaagaaaagaaaaaagacaaagatgacaaagaagag
gagaaggagaaagatgctaccacaaatgctgtggccacagagaattttgatcagaacaag
ctagaggaagaaatgaggaaacggaaggaaagagtggagaagtggagggaggagcaacgc
aagaaggccatggaaaacataggagaactgaaaaaagaaattgaggagatgaaacaaggg
aagaaatggagtctggaagatgacgatgatgatgaagaggaaactgcagaaggagaaaag
gaaggcaatgaggttgaggatgaagagttagatcctttggatgcttacatggaagaagtg
aaagaagaggtcaagaagttcaatatgaggagtgtgaaaggtggaggtgggagtgaaaag
aaaaccggaccaactgtgaccaaagtagtgactgtggtgacgaccaaaaaggcagctgtg
gagtccgagaagaagaagggggagctcatggagaacgaccaagatgcaatggagtattcc
tcagaagaggaggaagttgatcttcagactgccctgactggctatcagaccaagcagaga
aagctgctggaaccagtggatcatgggaagatagaatatgaacctttcaggaaaaacttc
tatgtggaagtaccggaactggccaaaatgactcaggaagaggtgaatgtgtacaggctg
gagctggagggcattacagtcaagggaaaaggctgccccaaaccaataaagacctgggtc
cagtgtggtatttccatgaagattctcactgccctcaaaaaacatggctatgagaagccc
acccccattcagacccaggctatcccagccattatgaatggacgtgacttgattggcatt
gctaaaacaggaagtgggaaaaccattgcatttctcctgcccatgttcagacacattatg
gatcagagagcgttggaagaaggagaaggtcccatagctgtcattatgacaccgactcgc
gagctggctctgcagattaccaaggagtgcaagaagttctctaagacgcttggacttcga
gtggtctgtgtctatggggggacaggaatcagtgaacagatagctgagctcaaaagaggt
gctgaaattattgtttgcacgcctgggcgtatgattgacatgttagcagctaacaatggc
cgggtgacaaacctccgcagggtcacctacgttgtgctggacgaggcagacaggatgttt
gacatgggctttgagccacaggtgatgcgcatcgtggacaatgtgcggcccgaccgccag
actgtcatgttctctgccaccttccccagggccatggaggccttggctcgcaggatcctc
agcaagcccatcgaggtgcaggtcgggggcaggagtgttgtgtgctctgatgtggaacag
cacgtgattgtcatagaagaggagaacaagtttctgaagctgctggagctgctggggcac
tatcaggagaagggatcagttatcatctttgtggataaacaagaacacgctgatggcttg
ttgaaagatttaatgagagcctcttatccctgcttgtctctgcatggaggtattgatcag
tacgacagggacagcatcatcaacgacttcaagaatggaatttgcaaacttctggtggcc
acatctgtagcagccaggggcctggatgtgaagcagttgatgctggtggtcaattacagc
tgccccaaccactatgaagattatgtgcaccgagcaggccggactggacgagcaggcaat
aaaggctatgcatacacgttcattactgaggaccaggcacgctatgctggggatatcatt
aaggctttggaattgtctgggaacccaattcctcctgatctggagaagctctgggctgat
ttcaaagaccaacagaaagctgaaggaaagctgattaagaaaagcagtggattctctggg
aaaggttttaaatttgatgaaacagaacaggctttggctaatgaaagaaaaaagcttcag
aaagcagctcttggcttgcaagattctgatgatgaagatacagctgttgatattgatgaa
cagattgagagcatgttcaactcaaagaaaagagtgaaagacatggcagcaccgggcaca
tcaaatgcccccacaccgtcagctgggaacgcagagaaactggagattgctaagaggctg
gcactgagaatcaatgcccagaagaacctcggagcagaggcacaagtcttggtccccttc
cactttaaggatgtgatgcagcaggctacaaacgctatcctgagaggaggcaccatccaa
gctcctactgtgtctgccaagaccattgcagagcagctggctgaaaagatcaatgctaag
ctcaattacgtgcccatagagaagcaggaggaagagaaacaggatggaggacaaaatgaa
tccttcaagagatatgaggaagaactggagatcaatgacttcccacagactgccagatgg
aaagttacctccaaagaagcactacagaggatcagtgaatattctgaagctgccatcacc
atcagaggaacttacttccctccaggcaaagaacccaaggaaggagaacgaaagatttac
ctggctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcacacga
cttataaaagaggagctcatcagattgcaaaactcttaccagcccaccaacaaaggcaga
tacaaagttctatga
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