Pogoniulus pusillus (red-fronted tinkerbird): 135185537
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Entry
135185537 CDS
T10504
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppus03016
]
135185537 (TRDMT1)
Enzymes [BR:
ppus01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
135185537 (TRDMT1)
Transfer RNA biogenesis [BR:
ppus03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
135185537 (TRDMT1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
135185537
NCBI-ProteinID:
XP_064018365
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Position
23:310918..357021
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AA seq
399 aa
AA seq
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MAPLRVLELYSGIGGMHQALKASCTWAEVVAAVDVNTLANEVYKHNFPGTALWAKTIEGI
TLQEFDRLSFDMILMSPPCQPFTRTGLQGDVSDPRAKSFLHFLHVLPRLQKLPTYLLLEN
VKGFESSSARAKLLETLEACGFEHQEFLLSPTCLGIPNSRLRYFLLARRHQDPFPFRVPG
QILTRFPDQDLEDLVKDKAADQVGEASSMSSEEKSLDSDTGPERSSKSSLPKGAFLFKLE
TVEEMARKEGQDTDSSVQMLEDFLEDEDEEKSQYLLPPKSLLRYAFLLDIVKPSCRRSTC
FTKGYGHYVEGTGSVLQTAVDVQLESVFKGIEELPEEEKLMKLSTLKLRYFTPREIANLH
GFPLEFGFPDQVTAKQRYRLLGNSLNVHLVAKLISILLG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctgcgggtgctggagctttacagtggcatcgggggaatgcaccaggccctg
aaagcaagctgcacgtgggcagaagttgttgctgctgttgatgttaacactcttgccaat
gaagtttacaagcacaactttcctggcactgcactgtgggcaaagacaattgagggcata
acactgcaggaatttgacagattatcttttgacatgattttgatgagccctccctgtcag
ccatttacaaggactggcctacaaggtgatgtctctgacccacgggcaaagagctttctc
catttccttcatgttctgccaaggctccagaagcttccaacctacctactattagaaaat
gttaaaggatttgaatcctcttctgcaagagctaagctgttggaaacgctggaggcctgt
gggtttgaacaccaggaatttctcctgtctccaacttgtctcggcattcccaactccagg
ctgcgctacttcctgctagcacgacggcaccaggacccctttccctttcgagttcctggg
cagattttgacaagattcccagatcaggatctagaagacttagtcaaggacaaagctgct
gaccaagtgggtgaagctagttccatgtcttctgaggaaaagagtctggattcagacact
ggtcctgagcgaagcagcaaaagcagtttgccaaaaggagcttttcttttcaagcttgaa
actgtagaggaaatggcaaggaaggagggtcaggacactgattcttctgttcaaatgctg
gaagatttcttggaagatgaagatgaagagaagagtcagtatttgttgccaccaaagtct
ctgctgcgctatgctttcctgctggacattgttaaaccctcctgccgcagatccacctgc
ttcaccaaagggtatggacactacgtggagggcacaggctcagtcctgcagacagcagtg
gatgtacagctcgaatcagtgtttaaaggcattgaggagctgccagaagaggagaagctt
atgaagttgtcgacgctgaagctgaggtacttcaccccaagagaaatagccaatctgcac
ggattcccgctggagtttggttttcctgaccaagtgacagcaaagcagcgctaccggctg
ctggggaacagcctcaacgtgcacctggtggccaaactcatctccattcttcttggataa
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