Pogoniulus pusillus (red-fronted tinkerbird): 135185560
Help
Entry
135185560 CDS
T10504
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135185560 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppus01007
]
135185560 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppus03016
]
135185560 (GARS1)
03029 Mitochondrial biogenesis [BR:
ppus03029
]
135185560 (GARS1)
Enzymes [BR:
ppus01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
135185560 (GARS1)
Amino acid related enzymes [BR:
ppus01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
135185560 (GARS1)
Transfer RNA biogenesis [BR:
ppus03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
135185560 (GARS1)
Mitochondrial biogenesis [BR:
ppus03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
135185560 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
135185560
NCBI-ProteinID:
XP_064018431
LinkDB
All DBs
Position
23:2787360..2821062
Genome browser
AA seq
723 aa
AA seq
DB search
MPLLPPRSVLPALLRRLRRLACPPAAPLRSRPAPAATPMDGPQAEALLAPLRQAVRQQGE
LVRKLKEEKAPQVDIERAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQ
AFSIYGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVD
KFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQELAD
LFVNYNVKSPITGNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQ
GKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFQNVADLNILLY
SSKAQVSGQSAHVMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPEKLRFRQHMENE
MAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPISVNIVQ
FEANKGAIGKAYKKDAKVVMEYLSVCDECYITEMEQLLNEKGEFTVETEGKTFKITKDMV
TVKRFQKTLHVEEIIPNVIEPSFGIGRIMYTVFEHTFHIREGDEQRTFFSFPAVVAPFKC
SVLPLSQNQEFMPFVKELSEALTRNGISHKVDDSSGSIGRRYARTDEIGVAFGITIDFDT
VNRTPHTATLRDRDSMRQIRAEISELPAIIRDLANGYLTWADVEAKYPQFEGQETGKKDT
IEE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgccgccccgtagcgtcctgcccgccctgctccgccgcctccgccgtctc
gcttgcccgcccgccgctccgcttcgttctcggcccgccccggccgcgacccccatggac
ggtccgcaagctgaggcgctgcttgcgcccttgcggcaggcggtgcggcagcagggagag
ctggtaaggaagctgaaggaagagaaagctccccaggtggatatcgaaagagctgtagca
gagcttaaagctcggaagagagtcctagaagcaaaggagttagccttacagcccaaagat
gacatcgtggacagagctaagatggaagacaccctaaaaaggaggtttttctatgatcaa
gccttttctatttatggaggtgtcagtggtctatatgactttgggcctgtggggtgtgct
ttgaagaacaacatcatccaagcatggaggcagcactttatacaggaagagcaaatcctg
gagatcgactgtaccatgctcacaccagagccagttctgaagacttctggtcacgtagac
aagtttgctgacttcatggtgaaggatgtgaagaatggggaatgttttcgtgctgatcac
ctcttaaaagctcacctgcaaaagctgatgtctgacaagaagtgcacagcagagaaaaag
gcagagatggaaaatgttctaacacagttggacaattatggccagcaagagcttgcagac
ctttttgtgaactacaacgtgaagtcacctatcactgggaacgacctgtcccctcctgtt
tctttcaatctgatgttcaagacctccattgggcctggaggaaacatgcctggctatctg
aggccagaaactgcccagggaatattcctcaacttcaaacgtcttctggagtttaaccaa
ggcaaactgccctttgctgctgcccagattggaaattccttcaggaatgagatctcaccc
cgctccggccttatcagagtgagggaattcaccatggcagaaattgagcactttgtggat
cccagtgagaaaaatcaccccaagtttcagaatgtggcagatctcaacatcctgctgtac
tcctccaaggcccaggtcagcgggcagtctgcccatgtaatgcggctgggagatgctgtc
caacagggtgtgatcaataactccgttctcggttacttcattggcagaatctacctcttc
ctcacaaaggtcggtgtatccccagagaagctgcgcttccgacagcatatggagaatgag
atggctcattatgcctgtgactgctgggatgcagagtccaaaacatcctatggttggatt
gagatcgttggctgtgctgatcggtcctgctatgacctctcctgccatgcccgtgccacc
aaagttcctcttgtagctgagaagcctctcaaagaacctatatcagtcaacattgttcag
tttgaggcaaataagggagccattggcaaagcttacaagaaggatgcaaaggtggtgatg
gaatacctgtctgtgtgtgatgagtgctacatcactgagatggagcagctgctcaatgag
aaaggggaattcactgttgaaactgaagggaaaacttttaaaataacaaaggacatggtc
actgtgaagagatttcagaaaacattacatgtggaagaaatcatcccaaatgtaattgag
ccctcatttggtatcgggaggatcatgtacacagtgtttgagcacacattccacatccgg
gaaggagatgagcagaggacgttcttcagtttcccagctgttgtagcaccattcaagtgc
tctgtgcttcctctgagccagaatcaggaattcatgccttttgtcaaggaactatctgaa
gcactcaccaggaacggcatctctcacaaggtggacgactcctccgggtccatcggccgg
cgctacgccaggaccgacgagatcggcgtggccttcggcatcaccatcgacttcgacacc
gtcaaccgcacccctcacaccgccaccctgagggaccgcgactccatgcgccagatccgc
gccgagatctctgagcttcctgccatcatccgtgacctggcaaacggttatctcacttgg
gctgacgttgaggcaaagtatccacagtttgagggacaagagactggcaaaaaggacaca
atagaggaataa
DBGET
integrated database retrieval system
