Pogoniulus pusillus (red-fronted tinkerbird): 135185737
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Entry
135185737 CDS
T10504
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135185737 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppus01002
]
135185737 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppus00536
]
135185737 (SHH)
Peptidases and inhibitors [BR:
ppus01002
]
Cysteine peptidases
Family C46: hedgehog family
135185737 (SHH)
Glycosaminoglycan binding proteins [BR:
ppus00536
]
Heparan sulfate / Heparin
Morphogens
135185737 (SHH)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
135185737
NCBI-ProteinID:
XP_064018885
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Position
23:19110948..19122269
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AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGTAIVHLERGGTKLVKDLSPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKIFYVIETRQPRAQLLLTAAHLLFVAPQHNQSQPGTPSSRALFASHVR
PGQRVYVLGEGGQQLLLAAVHSVSLREEASGAYAPLTAQGTILINRVLASCYAVIEEHSW
AHWAFAPFRLLQGLLATLCPSSGGALVDAPTTHGIHWYSRLLYRIGSWVLDSDSLHPLGM
VGPSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagactctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaagataagctgaacgctctggcgatctcggtgatgaatcagtgg
cccggggtgaaactgcgggtgacagagggctgggacgaggacggccaccactccgaggag
tctctgcactacgagggccgcgccgtggacatcaccacttcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtggaggcaggcttcgactgggtctactacgagtct
aaggcgcacattcactgctccgtcaaagcagaaaactcagtggcagccaaatcagggggc
tgcttccctggcacggccatagtgcacctggagcgaggcggcaccaagctggtgaaggac
ttgagccctggggaccgggtgttggtggctgacacagagggcaggctgctctacagtgac
ttcctcaccttcctcgaccgggaggatggctcccacaagatcttctacgtcattgagaca
cggcaacctcgggcccagctgctgctgacagctgctcatctcctctttgtggctccccag
cacaaccagtcccagccagggacccccagcagccgggcgctctttgccagccacgtacgg
ccaggccagcgagtctacgtgttgggcgagggtgggcagcagctcttgctggcagctgtg
cacagcgtctcactgcgggaggaggcttcgggggcgtatgccccactcaccgcccagggc
accatcctcatcaaccgggtgctggcctcctgctacgccgtcatcgaggagcacagctgg
gcacactgggcgtttgctcccttccgcctgctccaggggttgctggccaccctctgccct
tccagtgggggggccctggtggatgcccccaccacccacggcatccactggtactctcgc
ctcctctaccgcatcggcagctgggtgctggatagtgactctttgcacccactgggcatg
gtggggccatccagctga
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