Pogoniulus pusillus (red-fronted tinkerbird): 135186202
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Entry
135186202 CDS
T10504
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppus03021
]
135186202 (CTR9)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
135186202 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
135186202
NCBI-ProteinID:
XP_064019811
LinkDB
All DBs
Position
24:14608217..14626611
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AA seq
1166 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGRRSKKGAGEFDEFVNDDSDEDLPVSRKKKKRKGSGSEQDGEEEEGERKKKKRR
RPQKAEEGTDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSS
DEDKLKIADDGHGRNSNSDSDEGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRASVHQSEE
DSDSDRSARKRRRSESEQSDNESVQSGRSRSGGSENESHPASRSADSDRDSERGSDNEGS
GRGSGNESEPEGSNDEGSEGGSDDSD
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggggtctattgagatccctctccgcgacaccgatgaggttattgagcttgac
tttgatcagttacctgagggtgatgaagttataagtatactgaaacaggaacacactcaa
ctgcacatatggattgccttagcgctggaatactacaaacaaggaaaaacagaagacttt
gtgaagctattggaagctgcacgcatcgatggtaacttggactacagagaccatgaaaaa
gatcagatgacatgtctggatactttggcagcatactatgtacagcaggctcgaaaggag
aagaacaaagataacaagaaggagctcattactcaagctactttgttgtatactatggct
gacaaaattatcatgtatgatcagaatcacttgttgggaagagcctgcttttgtctgctt
gaaggtgataagatggatcaagctgatgcacaattccactttgtgctcaaccagtctcca
aataatattcctgctcttcttggtaaagcatgcatttctttcaacaagaaagattataga
ggagcccttgcctactacaagaaagcattacgtaccaatccaggttgcccagctgaggtt
cgattaggtatgggccactgcttcgtgaaactgaacaagctggaaaaagctcgcttagcg
ttcagcagggctctggagctaaattcaaaatgcgtaggggctttggttggacttgctgtt
ctggaactcaataataaagaggctgattccatcaagaatggtgttcagctcctctctaga
gcttacacaattgaccccagtaatcctatggtgttgaatcacttggctaatcatttcttc
ttcaaaaaggactatggtaaagtgcaacacttggctcttcatgctttccataatacagaa
gttgaagcaatgcaggcagaaagttgttatcagctggctagatcttttcatgtacaggaa
gattatgatcaggctttccagtattattaccaggccactcagtttgcctcatcttctttt
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgca
tcacaatgctttgaaaaagttttgaaagcttatcctaacaattacgagactatgaaaatc
cttggatctctttatgctgcttcagaagaccaggagaaacgggatattgcaaagggacat
ctaaagaaagtcacagaacaataccctgatgatgtagaggcatggattgagctagcccaa
attctagaacagactgatattcagggtgcactgtcagcctatggtacagccacacgcatt
ctgcaagagaaagtacaggctgacgtccccccagagattttgaataatgtgggtgctctg
cacttcaggctgggaaacctaggagaagccaagaaatattttttggcatcactggatcgt
gcgaaagcagaagctgaacacgatgagcattattacaatgctatctctgtaacaacgtcc
tataaccttgccagactatatgaggcgatgtgtgaatttcatgaagcagaaaagctgtat
aaaaacattttaagagagcatcctaattacgttgattgctacttgcgcttgggagctatg
gctagagataaaggaaatttttatgaggcttctgattggtttaaagaagcacttcaaata
aatcaggaccatccagatgcttggtctctgattggcaaccttcatttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatactgaaacagccctccacacaaaatgac
acttactccatgctggctcttggcaatgtctggttgcagactctacatcaacccacaaga
gacagggaaaaggagaagcgtcatcaagaccgtgcattagcaatctacaagcaagtactt
agaaatgatccaaagaacttgtatgctgctaatggcataggagctgtcttggcgcataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggcaacagcagatatc
agtgatgtgtggctgaatttggcacatatctacgtagaacagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcagaatactgaagtattg
ttatatctggcccgggcactcttcaagtgtggcaaattgcaggaatgcaagcaaactttg
ttaaaggccagacacgtagcaccaagtgatacagtccttatgtttaacgtagctttagtg
ctccaaagactagctacctctgtcctgaaagatgaaaaaagcaatcttaaggaggtactt
aatgctgtgaaagaactggagctagctcacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcgcttgctgctacggaagccaggcaatgctctgactta
ctgagtcaagcccagtatcatgtggctcgggcacgcaagcaggatgaagaagagagggag
ctgcgtgcgaagcaagagcaagaaaaagagttgcttcgccaaaaactacttaaagaacag
gaagagaaacgcctaagagaaaaagaagaacagaagaaacttcttgaacaaagagctcaa
tatgtggagaaaactaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggtggaggcaggcggtccaaaaaaggagcaggggaatttgatgagttt
gtcaatgatgacagtgatgaagatctgcctgtgtctagaaagaagaagaagaggaagggc
agtggcagcgaacaagatggggaagaagaggagggtgaaaggaagaagaagaagaggagg
agaccccagaaggcagaggaggggactgatgatgaagagcatgaaaatggtccaaggcct
aagaaacgacgtccacccaaagcagagaaaaagaaggctcccaaaccagaacgtctgcct
ccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattcttct
gatgaggataaactcaaaattgctgatgatggacatgggaggaacagcaacagtgattca
gatgaaggagaacagcagcacagtaaacgcattgtttctgatagtgattctgacaacaga
aacaaatctggtagcgaggctggtagcccaaggagggccagtgtccaccagtctgaggag
gattctgacagtgacaggtcagctaggaagagaaggcggtcagagtcggagcagtctgac
aatgagtctgtacagtcggggagaagtcgttctggtggttcagaaaatgaatcccaccca
gcttctcgcagtgctgactcagacagagattctgagagaggatctgacaatgagggttct
ggaagaggatctggtaatgaatctgaaccagaaggatccaacgatgaggggtctgaaggt
ggctcggatgacagtgattag
DBGET
integrated database retrieval system
