Pogoniulus pusillus (red-fronted tinkerbird): 135186457
Help
Entry
135186457 CDS
T10504
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04622
RIG-I-like receptor signaling pathway
ppus05164
Influenza A
ppus05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
135186457 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135186457 (IFIH1)
05168 Herpes simplex virus 1 infection
135186457 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppus04054
]
135186457 (IFIH1)
Enzymes [BR:
ppus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135186457 (IFIH1)
Pattern recognition receptors [BR:
ppus04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
135186457 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
DUF3638
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135186457
NCBI-ProteinID:
XP_064020157
LinkDB
All DBs
Position
2:46863411..46899367
Genome browser
AA seq
995 aa
AA seq
DB search
MAEAARDERFLYMIACFRPRLKQCIRVQPVLDQLCSLSAEEKEKVRAVALQRGDVEGAEE
LLRAVERGPRGCGWFHEFLQALESGGCNLAACYLNPSLSQLPSPDEEADHDLCVHLVQLL
HSTLVDKMRPVELAEKCLEMGIFQEEDLDRIHTVTDNRGNRDGARELLSRIVQKKGWFSP
FLTALRETQHGSLADDLSGNTRGTENGQNGMKSSTNEEAEVTSQPGYAILEDLKPQGKVN
NSFNNESSTLETTSGDGSGSSLNENLEQSYNTSDSDEDDVENRTSPEPDLVLRDYQMEVA
KPALNGENIIICLPTGSGKTRVAVYIAKDHLDKKKRALEPGKVIVLVNKVSLVEQHLQTE
FKPFLKRWYHVTGLSGDTQLKISFPEVVRRHDVIISTAQILENSLRNASVEDEDSVRLAD
FSLIIIDECHHTQKEGVYNNIMRRYLKEKIKNKKRAKENKPLIPQPQILGLTASPGVGGA
KSHSKAEEHILKICANLDASRIMTVEEHASQLQNQVKEPYKKIVIADDKRKDPFRERITE
IMTDIQNYCQLHPKSEFGTQPYEQWVIREERRAAKEKKRKERVCAEHLKKYNDALQINDT
IRMIDAYNHLCNFYKEEKSKKMVRTSNDDDEEPGVTKQDETDEFLIGLFDAKKKELKDLA
RNPAYENQKLIQLRNTLMEEFAKTREPRGIIFTKTRQSAIALFQWIEDNPKFEEVGIKAH
YIIGAGHNSETKHMTQNAQKEVTDKFRGGNVNLLIATTVAEEGLDIKECNIVIRYGLVTN
EIAMMQARGRARAAESTYALVASIGSGAVEREVVNNFREEMMYKAIQRVQKMPQEEYLAK
IENFQLQSILENKMKAKRNQHKTYKKKSSLIKFLCKNCHKLVCSGEDIQVIENMHHVSVK
KDFQSLYHARENRTQQDKHADELTNREIICKDCGQTWGNMMVHRGLDLPCLKIKNFVVVF
EDKKTTEDIFKRWKDLPVEFPGLDYAAYCSSSDED
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcggcccgggacgagcgcttcctctacatgatcgcctgctttaggccgcgg
ctgaagcagtgcatccgggtgcagccggtgctggaccagctctgctccctcagcgccgag
gagaaggagaaggtgcgggcggtcgccctgcagcggggcgatgtggagggggcggaggag
ctgctgcgggccgtggagcggggcccccgcggctgtggctggttccacgagttcctgcag
gcgctggagagcggcggctgcaacctggccgcctgctacttaaaccccagcctcagccag
ctgccctcgcctgacgaggaggcagaccacgacctctgcgtgcacttggtgcaactactc
cacagcacactggtggataaaatgcgccccgtagaactggcggagaagtgcttggagatg
ggcatcttccaggaggaggacctggatcggatccacactgttactgacaatcgtgggaac
agagatggtgcaagggagctactgagcagaatagtgcagaagaaaggctggttctctcct
tttttgactgctctgcgtgaaacccaacatggaagccttgcagatgatttaagtggaaat
acaagaggaacagagaatggacaaaatgggatgaagagcagtacaaatgaagaagcagaa
gtaacaagccagccaggatatgccatactggaggatttgaagccacaaggaaaagtgaat
aatagtttcaacaatgagagcagtacattggaaacaacttcaggagatggaagtggcagt
agcttgaatgaaaacctggagcagtcctacaataccagtgattcagatgaagatgatgtg
gagaacagaacttcacctgagccagatttggtcctgagagattaccagatggaagttgca
aagccagccctcaatggggagaatattataatatgtcttcctacaggcagtggtaaaacc
agagtggctgtttacattgccaaagatcacttggataagaagaaaagagcattagagcct
ggaaaagtgatagtgcttgttaacaaggtgtcgttggtagaacagcacttacaaacggag
ttcaagccgttcttgaagcgttggtatcacgttactgggttaagtggggacactcagctg
aaaatctcatttcctgaagttgtcagaaggcatgatgtcatcatcagtacagcacagatc
ctagagaactcactgagaaatgcatctgtagaagatgaagacagcgtccgcttagcagat
ttttcactcatcattattgatgaatgtcatcacactcaaaaggaaggtgtctacaacaac
ataatgcggcgttacttgaaagaaaagatcaagaacaagaagcgagcaaaagaaaacaaa
ccactgatcccacagcctcagattctgggacttacagcttcacctggtgtaggaggtgca
aaatctcactcaaaagctgaagagcatattctcaaaatctgtgccaatcttgatgcctct
agaatcatgactgttgaagagcatgcctcccagctgcagaatcaggtgaaagaaccctat
aaaaaaattgtgattgcagatgataaaagaaaggatccatttagagagagaattactgag
atcatgacagacattcaaaactattgccagctccatccaaaatctgagtttggaactcaa
ccttatgaacagtgggtgataagagaagagagaagagctgctaaagaaaagaaacgcaag
gaacgggtctgtgcagaacacctgaagaaatacaatgatgctctccagataaatgacacc
atccgaatgatagatgcatacaatcacctctgtaacttttataaggaggagaaaagtaaa
aagatggtaaggaccagtaatgatgatgatgaagaaccaggagtaacaaaacaggatgaa
acagatgaatttctaataggtttatttgatgcaaaaaagaaagagctgaaagacttggct
agaaatccagcctatgaaaatcagaagctaatccagctgcgaaacactctaatggaggag
ttcgcaaagactcgggaacccagaggaattattttcacaaagactcgacaaagtgccatt
gctctgttccagtggattgaggataaccccaaatttgaagaagtgggaattaaggcccat
tacatcattggtgctggacataacagtgaaactaaacatatgactcagaatgcacaaaag
gaggttactgataaattccgaggtggaaatgtaaatttactcattgctaccactgtagct
gaggaaggcttagacatcaaagagtgtaacattgttattcgctacggcctcgtcaccaat
gagattgctatgatgcaggctcgtggtcgagctcgagctgctgagagcacctatgcgctt
gtagcttccattggctctggagctgtggaacgtgaggttgttaacaatttccgtgaggaa
atgatgtacaaggccattcaacgggtccagaagatgccacaagaagagtatttagctaag
attgagaatttccagttgcaaagtatactggaaaacaagatgaaggcaaagagaaatcag
cacaagacatacaagaaaaagtcttcattaataaaattcctgtgcaaaaattgccacaag
ctggtatgttctggagaagatattcaagttattgaaaacatgcatcatgtcagtgtgaaa
aaagatttccaaagtctttaccatgcaagagaaaacaggacacagcaagataagcatgct
gatgagctgacaaatagggagattatctgtaaagactgtggacagacttggggaaatatg
atggttcaccgaggtcttgacctaccttgtctaaagattaaaaattttgtggttgtgttt
gaagacaaaaagacaacagaagatatttttaagaggtggaaagatctgcctgttgagttc
cccgggcttgattatgcagcatattgttcttcgagtgatgaagattaa
DBGET
integrated database retrieval system
