Pogoniulus pusillus (red-fronted tinkerbird): 135187069
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Entry
135187069 CDS
T10504
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135187069 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppus04147
]
135187069 (COPB2)
Membrane trafficking [BR:
ppus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135187069 (COPB2)
Exosome [BR:
ppus04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
135187069 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
135187069
NCBI-ProteinID:
XP_064021504
LinkDB
All DBs
Position
26:complement(19740226..19759181)
Genome browser
AA seq
912 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVTAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNADMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEFVKQNLADLRPAREYPLVTPNEERNLLEEAK
GFEPSGLMAPQKAEEPVPPPKQEVMKTGVQNSDLLPTRDQKTLLDLEDDLDNLDLEDIDT
TDINLDEEILDE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgccttgacataaaacggaaactaacagcccggtctgaccgagtgaagagt
gtagacttgcatcccacagaaccatggatgctggctagtctttacaatggcagtgtctgt
gtttggaaccatgaaacacagactctggtgaagacttttgaagtgtgtgacctgccagtg
agagctgccaaattcgtggcaaggaagaactgggttgttacaggagcggatgacatgcaa
atcagagtttttaattataacaccttggaaagagttcacatgtttgaagcacattcagat
tacattcgctgtattgctgtgcatcccacacagcctttcatactgacaagcagtgatgac
atgctcattaaactctgggactgggataaaaaatggtcttgttctcaggtgtttgaaggg
cacacccattatgtcatgcagattgtcataaacccaaaagacaataatcagttcgccagt
gcctctttggataggacaatcaaggtatggcaacttggctcctcttcacccaattttact
ttggaaggccacgagaaaggagtaaactgcattgactattacagtggaggggacaagccc
tatctcatctcgggtgcagatgaccgcttggttaagatctgggactaccagaataaaaca
tgtgtgcaaacactggaaggacatgctcaaaatgtgtcgtgtgtcagcttccaccctgag
ctgcctatcatcatcacgggatctgaagatggaactgtgcgcatttggcattcaagcact
taccgcctggaaagtaccctcaactatggcatggagagggtgtggtgtgtggccagttta
agaggatccaacaacgtggctttaggatatgatgaaggcagcattattgttaagcttggt
cgtgaagaacctgccatgtccatggatgcaaatggaaaaatcatttgggctaagcattca
gaggtccaacaggctaacttgaaagctatgggagatgccgaaatcaaagacggagagaga
ttgcccctggcagtaaaggatatggggagttgtgaaatctatcctcagacaattcagcac
aaccctaatggacggtttgtagtggtgtgcggagatggtgaatatatcatctacacagct
atggctctgagaaacaagagctttggctctgcacaggagttcgtatgggcacatgattct
tcagaatatgcaatcagggagagcaacagtgttgtaaagatatttaaaaacttcaaagag
aagaagtccttcaaacctgattttggagcagaaggtatttatggtggcttcctgttgggg
gtcagatctgtgaatggtttggcattctatgattgggaaaacacggaactgattcgcaga
attgaaattcagcccaaacacattttttggtctgactcgggtgagcttgtctgcattgct
acagaggagtctttcttcattctgaaatacctatcagaaaaagttacagcagcccaagaa
acacatgaaggtgtcactgaagatggaattgaagatgcttttgaggttctgggtgagatt
caggagattgtgaaaacaggcttgtgggtaggtgactgctttatttacaccagttctgtg
aacagactcaactactatgttggcggagaaattgtcaccattgcccatttagacaggaca
atgtatctcttgggatatattcctaaggacaaccgactttatttgggtgataaagagcta
aacattgttagctactctttgctggtctcagtgcttgaatatcaaaccgctgtgatgagg
agagattttggtatggctgacaaagttcttcccaccattccaaaagagcagagaaccaga
gttgcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatctacggat
ccagaacatcgctttgaacttgctcttcagcttggagaattaaaaatagcctatcagctt
gcagtggaagcagagtcagaacagaaatggaaacaacttgctgagcttgccattagtaaa
tgccagtttggcttagcccaagagtgtctccaccatgcacaagactatggaggactgctg
ctcctggctacagcttctggaaatgctgacatggtcaataagttagctgaaggagcagag
aaagatggcaagaacaacgttgcatttatgagctacttcctgcagggaaagctcgattcg
tgtttggagctgctgattaaaacggggcgtctcccagaagctgcttttcttgcacggacc
tatttgccaagccaagtctcaagggttgtcaaactgtggcgggagaatctctctaaagtc
aaccaaaaagctgccgagtcccttgctgatcctacggaatacgaaaatcttttccctggc
ctgaaggaagcttttgtggctgaagagtttgttaaacagaaccttgctgacctgcgacca
gccagggagtacccccttgtcactccaaatgaagaaagaaatttacttgaagaagcaaaa
ggctttgagccatctggattaatggcacctcagaaggctgaagaaccagttccacctcct
aaacaagaagtgatgaagacaggtgtgcagaactctgatctgcttccaacaagagatcag
aagacactgttggacttggaagatgacttggataatttagatctagaagatattgatacc
acagatatcaacttggatgaagagatcttagatgagtga
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