Pogoniulus pusillus (red-fronted tinkerbird): 135187093
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Entry
135187093 CDS
T10504
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03030
DNA replication
ppus03410
Base excision repair
ppus03420
Nucleotide excision repair
ppus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135187093 (RFC4)
03410 Base excision repair
135187093 (RFC4)
03420 Nucleotide excision repair
135187093 (RFC4)
03430 Mismatch repair
135187093 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppus03032
]
135187093 (RFC4)
03036 Chromosome and associated proteins [BR:
ppus03036
]
135187093 (RFC4)
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135187093 (RFC4)
DNA replication proteins [BR:
ppus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135187093 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
135187093 (RFC4)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135187093 (RFC4)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135187093 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
135187093 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_assoc_2
Rad17
AAA_30
AAA_16
AAA_22
AAA_11
DUF815
SLFN-g3_helicase
Mg_chelatase
AAA_14
AAA_19
AAA_28
RuvB_N
AAA_24
AAA_5
TIP49_C
DNAX_ATPase_lid
AAA_7
bpMoxR
ResIII
Motif
Other DBs
NCBI-GeneID:
135187093
NCBI-ProteinID:
XP_064021561
LinkDB
All DBs
Position
26:complement(6683447..6696426)
Genome browser
AA seq
365 aa
AA seq
DB search
MQAFLKGPSSISTKPPAAKEKGPAGAAGSSGESKRLKPIPWVEKYRPKNVDEVAFQDEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKAFAQLTASGSRSDGKMCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQRQRLLDVAEKEHVKINSEAVSYLVKVSEGDLR
KAITFLQSATRLMGGKEITEKIVTEIAGVIPKETTDELLAGCGSGSFEKLETLAKNLINE
GYAVAQLVNQLHDVVVESEDYSDKQKSAIVEKLAEVDKCLADGADEYLQLVSLCGLVMQQ
LTQNT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctcaaaggcccgtcttccatcagcaccaagccccctgctgccaaggag
aagggcccagcaggcgcagctgggagcagcggggagagcaagaggctcaaacccatcccc
tgggtggagaaatatcgccccaaaaacgtggatgaagtcgcctttcaggatgaagttgtt
gctgtgctgaaaaagtccttggaaggtgctgatcttcccaatctgctgttctatggccca
cctggaactggaaagacttccactattttagcagctgctagagaactctatggacctgaa
ttattccggcaaagagtccttgagttaaatgcttctgatgagcgtggaatacaagtgatt
agggaaaaagtgaaggcttttgctcagctgactgcatctggaagccgttcagatggtaaa
atgtgccccccttttaaaatcgtgatactggatgaagcagactcaatgacttcagcagca
caggcagcattaagacgcacaatggaaaaagaatctaaaacaacacgtttctgccttatt
tgtaactacatcagcagaataattgaacctttaacatctcgatgctccaaattccgcttc
aagcctttgtcagacaaaatccaacggcagaggctattggatgttgccgagaaggaacat
gtgaagattaatagtgaggcagtgtcataccttgttaaagtgtcagaaggggacttaagg
aaagcaattacttttcttcaaagtgccactcgcctgatgggtgggaaagagatcacagag
aaaatagtcactgaaattgctggggtcatccctaaagaaacaactgatgaactgctggct
ggctgtgggagtggttcatttgagaagctggaaacgctggcaaagaatctcataaatgaa
gggtatgctgttgctcagcttgtgaaccagctgcatgatgttgttgttgagagcgaagat
tacagtgacaagcagaaatctgccatagtcgagaaacttgcagaagtagataaatgcttg
gcagatggtgctgatgagtacttgcagttggtgagtctctgtggccttgtgatgcagcag
ctgacacagaacacttaa
DBGET
integrated database retrieval system
