Pogoniulus pusillus (red-fronted tinkerbird): 135187277
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Entry
135187277 CDS
T10504
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppus03021
]
135187277 (SUPT6H)
03036 Chromosome and associated proteins [BR:
ppus03036
]
135187277 (SUPT6H)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135187277 (SUPT6H)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135187277 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
135187277
NCBI-ProteinID:
XP_064021930
LinkDB
All DBs
Position
27:complement(8453653..8483038)
Genome browser
AA seq
1724 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEGSDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVRNAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQSSSSFSRKGPSTIQKIKEAL
NFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAY
QYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAK
AARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFGLT
PEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLV
RQVLRQTFQERAKVNISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAEDE
GLLTIDICIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLY
VQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIRVL
GIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLN
KKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENE
FRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLSALYCEF
INRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCH
MGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAED
ANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYR
SPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDESGLWQCPFCQ
QDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGIAGFIPTKFLSDKVVKRPEERVKVGMT
VHCRIMKIDIEKFGADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQR
TTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVD
VREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKK
LEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFP
TVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNSLPQNMTSQ
MFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYS
YTTPSQPMTTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQWL
QEKEAERRKQKQRLTPRPSPSPMIESTPMSLAGDATPLLDEMDR
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtagaaagtgaagcagaggagtcagaggaggagtacaaccaggatggg
gaggttgtgcccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaggaa
gaagagctgaatcttgatgatcaagatgagcagggtaacctgaagggattcatcaatgat
gatgatgatgaggaagaggaggaagaaggcagtgactctggagactctgaggatgatgtt
ggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgattttgacctc
attgaagagaacttgggtgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaaatg
tctgatgatgaggatgatgaagaggaagactatggaaaagaagaacatgaaaaagaagcc
attgctgaagaaatctttcaggacggtgaaggcgaggagggaggggaagctgttgaggct
cctgttgctccacctgaagaggaagaggaggaggaggaagatgaatctgacattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggcggaagaagctccct
ggatacacagatgctgctttgcaggaagcccaggaaatcttcggtgtggactttgactat
gatgagtttgagaagtataatgagtatgatgaggagatggaggaggaatatgagtatgag
gatgaagaaaccgaaggggagacccgtgtacgccccaagaagaccaccaagaagcgtgtc
agtcgacgcagtatctttgagatgtacgaacccagtgagctggagagcagtcacctaacg
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagttgcgatccatc
ccagtgagaaatgctgaagatgatgagctggaggaagaagctgactggatttacaggaac
gccttcgcgacacccaccatttccttgcaggaaagttctgactacctcgaccgtggacag
tccagcagcagcttcagccgcaaggggcccagtaccatccagaagattaaagaagctctg
aatttcatgagaaatcagcattttgaggtcccatttatcgccttctacagaaaggaatat
gtggagccagagctgcacatcaatgacctgtggagggtctggcagtgggatgagaagtgg
acccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatgcaggcctat
cagtacgaacaaatctctgctgacccagacaagcccttggcagatggaataagggcctta
gatactactgacatggagaggctgaaggatgtgcagtccatggacgagctgaaggatgtc
tacaatcacttcctactctactatgggagagacatccccaagatgcagaatgctgccaag
gctgctcgaaagaagcagaagcgtatccgagaggacggtgaagaagaggaaggtgaaggg
gaggatgcagaagacgatgagcagaaggggcctgagctgaagcaggcttcccggcgggat
atgtacaccatctgtcagacagctgggctggatggcctggctaaaaagtttggtctgaca
cctgagcagtttggagagaatctccgagacagttaccagcgtcacgagacggagcagttc
ccagcagagcccttggagctggccaaggattatgtctgtagtcagttcccaagccctgaa
gctgtgttggaaggagctcgatacatggtggctttgcagatagccagggagcctttggtc
aggcaggttctgagacagactttccaagaaagagccaaagtcaacatttcaccaaccaaa
aaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttgaagaac
aaacctgtgaaggagctgcgtgatgatcagttcctgaaaatgagcctggctgaggatgag
ggactgctcactatagatatctgcattgacatgaaaggagtggagggttatggcagtgat
cagacatactttgaggaaatcaaacagttctattaccgggatgagttcagccaccaggtg
caggagtggaatcggcagcgtacgatggccatcgagcgctccctcaaccagttcctctat
gtgcagatggctaaagagttgaagaacaaactactggtggaggccaaggagtatgtcctc
aaggcttgcagccggaaactgtacaactggctgaaagtagcttcctaccgtcccgatcag
caagtcgaggaagatgatgatttcatggatgaaaaccaagggaagggcattcgggtgcta
ggcattgcattttcctcagccagggaccacccagtgttttgcgccctcgttaatggagaa
ggtgaggttacagacttcctcagactgccacatttcacaaagagaaggaatgcctggcgt
gaggaggagagggaaaagaaggcccaggatattgaaaccttgaaaaaattcctcctcaac
aagaagcctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctgatggag
gatgtgaagagaattgttcatgagctggatcaagggcagcagctgtcttctattggagtg
gagctggtggacaatgaactggccatcctttacatgaacagcaagaagtctgagaacgag
ttccgggactatccgcctctgctgcgccaagctgtctccctggctcgacgcattcaggac
cccctcatcgagtttgcccaggtctgcagctccgatgaggatattctgtgcctgaaactc
caccctctgcaggagcatgtggtgaaggaggagctgctgagtgccctctactgtgaattc
ataaaccgtgtgaacgaggtgggagtggatgtgaaccgagccattgcccaccctcacagc
caggctctgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctgctgaag
atcttaaaacaaaacaacacacgtctggagaacaggacccagctggttacaatgtgtcac
atgggacccaaggtgtttatcaactgtgctggcttcatcaaaattgacacagcatcgctg
ggcgatagtactgattcctacattgaagtcctggatgggtctagggtccatcctgaaacc
tatgaatgggcaaggaaaatggcagtggatgccttggagtatgatgagtcagcagaggac
gctaaccccgcaggagctctagaggagatcttggaaaaccctgagcgtctgaaggacctg
gatctcgatgcctttgctgaggaactggaaagacagggctacggtgacaagcatatcact
ttatatgacattcgagctgagctgagctgcaggtacaaggacctgagaaccccataccgt
tctccaaacacagaggaggtcttcaatatgctgaccaaagaaactccagagactttttat
ataggtaaaatgatcatctgcaacgtgactgggatagcccacaggcggccacagggagaa
agctacgaccaggcaatacgaaatgatgagtccggtctttggcagtgtcctttctgccag
caggataacttcccagagctcagcgaggtttggaatcactttgacagtggctcctgcccg
ggtcaggccattggagtgaagacacgactggataatggcatcgctggcttcatcccaaca
aaatttcttagtgataaggtggtcaagaggccagaagaaagggtgaaggtgggaatgact
gttcactgcaggattatgaagattgacattgagaagtttggtgcagacctgacctgcagg
acctcagacctgatggataagaacaatgagtggaaactacctaaagacacctactatgac
ttcgactctgaggcagcagatcacaagcaggaagaagacatgaaaagaaagcagcagcgg
acaacgtacatcaagagagtaattgctcacccatcattccacaacattagcttcaagcaa
gcagagaagatgatggagaccatggaccaaggggacgtgattattcggccgagtagcaaa
ggggagaaccacctgactgtcacctggaaggtgaacgatggcatttaccagcacgtggat
gtccgagaagagggcaaggagaatgccttcagcctgggctccacgctttggattaacaca
gaggaatttgaagacctggatgaaattgttgctcgctatgtccagccaatggcttctttt
gccagagacctgttgaatcacaaatactatcaggactgcaatggtggagacaagaagaag
ctagaagagctgctgataaagaccaagaaagagaagccaacatttattccctactttatc
agtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcgaggcaaacca
aggatagagtacgtgacagtgacaccagaagggttccgctacaggggccaggtcttccct
actgtgaatggactcttccgatggtttaaggatcattatcaggaccctgttccaggtatt
acccccagcagtagcagtcggaccaggactccagcctccattaatgctactccagctaac
attaatctggcagacctgacccgtgcagtgaactctctaccacagaacatgacctcccag
atgttcagtgccatcgctgctgtgacaggccaggggcagaacccaaatgccacccctgca
cagtgggcatccagtcagtacggttatggaggcagtggaggtggcagcagcgcataccac
gtcttcacgactccagcacaacaaccagtggccacccctctgatgacccccagttactcc
tacactacccccagccagccgatgacaacgccccagtaccagctccaggccaacaccaca
ccccagtccacccagtcccagacacagtcacagccatcatccagctccaggcagaggcag
cagccaaagaccaacagtcacgctgccatcgactgggggaagatggccgagcagtggctg
caggagaaggaggctgagcggaggaaacagaagcagaggctgacacctcgcccgtccccc
agccccatgatcgagagcacgcccatgtccctggctggggacgccacgccgctgctggac
gagatggatcgatag
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integrated database retrieval system
