Pogoniulus pusillus (red-fronted tinkerbird): 135187388
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Entry
135187388 CDS
T10504
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppus04147
]
135187388 (COL18A1)
00535 Proteoglycans [BR:
ppus00535
]
135187388 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
ppus00536
]
135187388 (COL18A1)
Exosome [BR:
ppus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135187388 (COL18A1)
Proteoglycans [BR:
ppus00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
135187388 (COL18A1)
Glycosaminoglycan binding proteins [BR:
ppus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135187388 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
135187388
NCBI-ProteinID:
XP_064022117
LinkDB
All DBs
Position
2:34100412..34142658
Genome browser
AA seq
2035 aa
AA seq
DB search
MGTPDPPALEFTEVPVYQYAVGGAPRTPVSRGHRYREDLGTARTPGAASAPKAPVPPRLG
SVGMPCPPRRLLLGLFVLLVPVASQEPGKTKRKSPNDVSSMARPQYGSPPAPSMARPAFP
GRPPFEPSVLPESDWGKTPASSLLSFVWPLHCALRSNGARFPFLMAPPRFGFLLLLACCF
SSSETQLLDWIWGSTKTTESPAAPGERTTVMESLTSAAAPTHSVPPGMVGGQMVREVTTP
QYQEPDTGTAAPASKETTTENAKQLDGNAMGLVESMSWPSITPPHSMSPAAGQDAASSST
KNPHLLGTVTTKDPQLLGSRTTEDSQLLESRTTEDLQLLGSGTAEDLQLLGTGATKDPQL
LRSGTTEDLQLLGSGTAEDLQLLGTGATKDPQLLRSGTTEDLQLLGTEATKDPQFLRSRT
TEDPQLLGTGVTENLQLLGTGATKDPPFLGMKNTEDLQLLGTGTPVAMGTQVSLQRPTGP
RPGSAPFLFSPGGSSREQAVPPWDPTAQLPQHGRGAFPTLPKLWHGTSHPGLVVAGTNGS
RSPPLPNRRADNGVDPPLADNSSPLKFDLLTAAARLYGSGGTGLPSYPGLLPAAGRCLPI
LTRLPFCSVLGTNHFRLPNYLHHSSEVEIQAALHEWEGLLESRCHRFVEWFLCLLLLPGC
SASIPITPPPCQGFCEAVRDLCWMHLAGGQLPLPCDALPKEDDGYSCVFINASAENLSTE
VSLLELIGDPPPEEILKIYGPDNNPGYVFGPNANTGQVARYHLPSPFFRDFSILFHIQPT
TPRAGVLFAITDSSQSTIYVGIKLSELRAGKQQIIFYYTEPGSPTSNVAATFTVPTLLNQ
WTRFAISVEEDEVILYLDCEEHERVRFERSPDEMELEEGSGLFVAQAGGADPDKYQGVIA
DLKLLGDPRAAERQCEEEDDDAEEVSGDFGSGAEGGHRPLGKVGGVPGLVDAVPVTSPPV
VVGSGGSPQQAERTRAEETLRGSTGGTGPKGEKGEKGERGLKGDMGTGGIVRTGSVKGEK
GEKGELGVKGSAGFGYPGSKGQKGEPGDPGPPGTLSQHTDGSVEQVTGPPGPPGRDGAPG
RDGEPGDPGEDGKPGDMGPQGFPGMPGEPGLKGEKGDPGMGPRGPPGPPGPPGPPGPSFK
HDKLTFIDMEGSGFTGELETLRGPRGPPGPPGPPGVPGLPGEPGRFGMNHTGLPGPPGLP
GRDGIPGPPGPVGLQGPPGRDGTPGQPGPKGERGDMGDLGLPGAPGPKGSKGETGPPGAP
GETGLAGLPGPIGPRGQPGPPGPPGPPGPGYEAGFSDMEGSGLPFATGSPGPRGPEGPQG
VPGLPGVKGEVGSPGQPGLPGMKGDAGVPGVDGRPGLEGFPGPQGPKGDRGSPGEKGEPG
QDGVGLPGPPGPPGPPGQVITVSGEEKSLVALPSLEGRPGHAGFLGPVGPKGDRGSSGPQ
GPPGLKGEKGEPGVIISPDGTVVTAKVKGEKGEPGLRGPIGPSGPQGRPGMKGEIGFPGR
PGRPGMNGLKGEKGDPADVSSILGLRGPPGPPGPPGPPGPPGSIVYDNSNAFSDSGHPAL
QAFPGFQQFSGQKGEKGDAGAPGPPGHFPYDLSHFSANLRGDKGDAGPKGEKGEPGSTSL
YNPSISGLPGPPGPQGYPGLPGPKGDSIVGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGP
PSFPGPHRQAISIPGPPGPPGPPGPPGTSEMSLGLRALPTYQVMLSAAHELPEGSLVFLT
DRQELYARLRGGFRRVLLEEHTLIPSSALDNEVYDKLPSVHYAGPQPPLQPQGPLHPLRN
HVPPPTARPWRGDEVVANQHRLPEQPLLHHQHELLNSYYIHRRPDPAPVAAHVHQDFQPA
LHLVALNAPLSGGMRGIRGADFQCFQQARQVGLAGTFRAFLSSRLQDLYSIVRRADRTAV
PIVNLRDEVLFTNWEALFTGSGAPLRAGARILSFDGRDVLRDASWPQKSVWHGSDAKGRR
LPESYCETWRTDERTATGQASSLASGKLLEQVASSCQQNFIVLCIENSFMTAAKK
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atggggaccccagacccaccggcgctggagttcaccgaggttccggtgtaccagtatgcc
gtgggaggcgccccgaggacaccggtatcccgagggcaccggtaccgcgaggatctcggt
actgcgaggacccccggagccgcctcggcaccgaaggctccagtgccgccaaggctgggg
agcgtgggtatgccgtgccccccgcggcggctgcttctcgggctctttgtcctgctggtc
cccgtcgcttcccaggagcccgggaagactaaaaggaagtccccaaatgacgtatccagt
atggctcgcccccagtatggctcgcccccagcccccagtatggctcgcccagcctttcca
ggccgccccccctttgaacccagtgtgctcccggagtctgactggggcaaaactcctgcc
tcttccctgctttccttcgtctggcctctccattgcgctctccgaagcaacggggctcgt
tttcccttcctgatggccccacctcgctttggctttctgctccttctggcttgctgcttc
tcctcttctgaaacacagctcctggactggatctggggcagcacgaagaccacggaaagc
ccagcagcacccggtgagagaaccacagtgatggaatcccttacctctgcagcagctccc
acccacagtgtgcccccaggaatggtgggtggccaaatggtgagagaagtcaccacccca
cagtaccaggagccagatactggtacagcagcacctgcaagcaaggaaaccacaactgaa
aatgccaagcagttggacgggaatgccatggggctggtggagagcatgtcatggccaagc
atcactcctccccacagcatgtcacctgctgctggccaggatgcagccagcagctccacc
aagaacccacatctcctggggacagtgaccaccaaggaccctcagctcctggggtcaagg
actactgaggactcacaactcctagagtcaaggaccactgaggacctgcagctcctgggg
tcagggaccgctgaggacctgcagctcctgggtacaggagccacaaaggacccacagctc
ttaaggtcagggaccactgaggacctgcagctcctggggtcagggaccgctgaggacctg
cagctcctggggacaggagccacaaaggacccacagctcttaaggtcagggaccactgag
gacctgcagctccttgggacagaagctaccaaggatccacagttcctgaggtcgaggacc
actgaggacccacagctcctgggaacaggggtcacagagaacctgcaactcctgggaaca
ggggccactaaggacccaccgttcctggggatgaagaacaccgaggacctgcagctgctg
gggacggggacccctgtggcaatggggacacaggtgtccttgcagagaccaacgggtccc
cggccaggtagtgccccttttcttttctcaccaggtggcagttcccgtgagcaggctgtg
ccaccctgggaccccacagcacaactgccccaacatggccgtggagcgtttcccacccta
ccaaagctgtggcatggcaccagccacccagggctggtggtggctggcacaaatggcagt
cggagccctcctttgcccaacaggagggcagataatggtgtggatcctcctcttgctgat
aactccagtcctctcaagtttgatttactaaccgctgctgcgcgactctacggtagtggt
ggcacagggctcccatcctatcctggactgttgccagcagccggacgttgccttcccatc
ttgacccgcctgcccttctgcagcgtgctgggcaccaaccatttcagattaccaaattac
ctccaccacagcagcgaggtggaaattcaggcagctttgcatgagtgggaggggctgctt
gaatcgcggtgccatcgcttcgtggagtggtttctctgcttgctcctgctccctgggtgt
agtgcctcgatccccataacccccccaccatgtcaaggcttctgtgaggctgtcagagac
ctgtgttggatgcacttggctggtgggcagctgcctctgccttgtgatgctctccccaag
gaggacgatgggtattcttgtgtctttattaatgcttctgcagagaacctgagcactgag
gtcagcctgctggagctgattggagacccccctccagaggaaatcctcaaaatttatggc
cctgacaacaaccctggctacgtctttggccccaatgccaacacgggtcaagtggcccgg
taccacttgccaagccctttcttccgggacttttccatcctattccacatccagcccacc
accccgcgagctggtgtgctctttgctatcacggactcctcgcaaagcaccatctacgtg
ggcatcaagctctcagagctgcgggcaggcaagcagcagatcatcttctactatacagaa
ccaggctcaccgacctccaatgtggcagccaccttcactgtgcctaccttgctcaaccag
tggacgcgtttcgccatcagcgtggaggaggatgaagtcatcctctatctggactgtgag
gagcatgaacgggtccgctttgagcgctccccagatgagatggagctggaagagggctct
gggctctttgttgctcaagctggaggagctgatccagataaataccagggggtgattgct
gatttgaagctattaggggacccaagggcagctgagcgccagtgtgaggaagaggatgac
gatgctgaagaggtctcaggtgattttggcagtggggcagaaggtggacaccgacctctg
gggaaagtcgggggtgtcccagggctggtggatgctgtccctgtcacttctccccctgtg
gtggtgggcagtgggggctccccacagcaagcagagaggaccagagcagaggagacactg
cggggctccacgggaggcactggccccaaaggtgagaaaggagaaaagggtgaacgtggc
ctgaaaggggacatggggactggtggcattgtgaggacaggcagtgtcaaaggtgaaaag
ggagagaaaggagaactgggcgttaagggcagcgctggatttggctaccccggttccaag
ggccagaaaggcgaacctggtgaccctggcccccccggaaccctctcacagcacactgat
ggctcagtggagcaggtcactggtcccccagggccaccagggagagacggagcccctggc
agggatggcgaacctggtgatcccggtgaggacggcaaacccggtgatatggggccccag
gggttccctggaatgccaggggagcctggtctgaagggagagaagggtgacccaggcatg
gggcctaggggaccccctggaccacctggacccccaggaccaccaggaccctccttcaag
catgacaagctgaccttcatcgacatggagggttctggcttcactggcgaactggagacc
ctgcggggtccacgagggccacctggccccccaggaccaccaggtgtgcctggtttgcca
ggtgagccaggacgatttgggatgaaccacacaggcctgccaggaccaccagggctgcca
ggcagggatgggatccctggaccaccagggccagtgggtcttcagggtcctcctggacga
gatgggacacctgggcagccagggcccaaaggagagcggggtgacatgggcgaccttggc
ctccctggtgcgccaggacccaagggcagcaagggagaaacaggaccaccaggagctccc
ggagaaactggcttagctggtctgcctgggcccatcggaccccgtgggcagccaggacct
ccagggcccccaggacctccagggccaggctacgaggctggatttagcgacatggaggga
tctgggctaccgttcgccactggctcccctgggccacgtggacctgaaggaccacaggga
gtcccaggactaccaggagtgaagggggaggtcggcagtcctgggcagcctggcttgcct
ggaatgaagggggatgctggtgtgcctggtgtggacggccgccctggcctggagggcttc
cctggcccacagggacccaaaggtgacagaggcagccctggtgagaagggtgagccaggc
caagatggtgtggggctgcctggcccccctgggccacctggtccccctggacaggtcatc
actgtctccggcgaagagaagtctttggtggctttacccagtctagagggcagaccaggt
cacgctggcttcctgggcccagtgggaccaaaaggagaccgggggtcatctgggccccag
ggccctccagggttgaagggagagaagggggagcccggtgtcatcatcagtccggatggg
actgtggtcactgcaaaggtgaaaggagaaaagggggagccaggactgcggggaccaata
ggaccctctggtccccagggacgaccaggaatgaaaggagagattggctttccaggcaga
cctggacgtcctggcatgaacgggctgaagggtgagaagggtgaccctgccgatgtcagc
agcatcctgggcttgcggggacccccaggacctccagggcctccagggcccccagggcca
cctggcagcatagtctatgacaacagcaatgccttcagtgactctgggcatcctgcactg
caagccttccctggtttccaacagttttcaggacaaaaaggagagaaaggcgatgctgga
gccccaggacctccaggtcacttcccttatgacctgagtcacttcagtgccaatctgcgg
ggtgacaagggtgatgcaggtcccaagggtgagaagggtgagccaggcagcacttccctc
tacaatcccagcatctctggactaccagggcctccagggccccagggctaccctgggctg
ccgggtcccaagggagacagtattgttgggccaccaggacctcctggacctcagggcccc
cctggtattggatatgaggggcgacagggcccccctggccctcctggcccccctggtcca
ccctccttcccaggtccccacagacaagctatcagcatccctggaccccctggaccaccc
ggacctcctggaccaccagggaccagtgagatgtctttggggctgcgtgccctgccgacc
taccaggtgatgctgagcgccgcgcatgagctgcctgagggcagccttgtctttctgacc
gaccggcaggagctctacgctcgcctgcgtgggggcttccgacgagtgctgctggaggag
cacactctgatccccagttcagctttggacaatgaggtgtatgacaagctgcccagtgtg
cactacgccggcccccagccccccctgcagccccagggacccctgcatcctctgcgcaac
cacgtccccccacccactgcccgaccctggcgcggggatgaagtggtggccaaccagcac
cgcctgcctgagcaacccttgctccaccaccagcatgagctcctcaacagctactacatc
caccgccggccggatccggctcctgtggctgcccacgtgcaccaggacttccagcctgct
cttcacctggtggccctaaatgccccgctgagcggcggcatgcgtggcatccgaggagct
gatttccagtgcttccagcaagcccggcaggtcgggctggctggcaccttccgtgccttc
ctctcctcccgcctgcaggacctctacagcattgtgcgcagggccgaccgcactgctgtg
cccatcgtcaacctccgggatgaagtcctcttcactaactgggaagcccttttcacgggc
agcggcgccccactgagagctggtgcccgcatcctctcctttgatggcagagacgtcctg
cgagatgcaagctggccacagaagagtgtctggcatggctcagatgccaagggccggcgc
ttgcccgagagttactgtgagacgtggcggacggacgagcgcactgccactggccaggct
tcctcactggcttctggcaagctgctggagcaggtggccagtagctgccagcaaaacttc
atcgtcctctgcatcgagaacagcttcatgactgctgccaaaaaatga
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