Pogoniulus pusillus (red-fronted tinkerbird): 135187531
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Entry
135187531 CDS
T10504
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135187531 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135187531 (SCARF1)
Membrane trafficking [BR:
ppus04131
]
Endocytosis
Phagocytosis
Scavenger receptors
135187531 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
135187531
NCBI-ProteinID:
XP_064022385
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All DBs
Position
27:9039097..9046431
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AA seq
866 aa
AA seq
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MAAARPILCLQLWLWVQSSAQELDPNGKNVCRLPSGPACCPGWRQEGQECTAALCEGADA
CGVDEVCVRPGVCLCKPGFFGADCSSACPEQYWGPDCKRSCPCHPNGRCDPASGHCTCDP
NHWGELCQFPCQCGPHGRCDPLTGACHCEPGWWAPACKKQCQCNLASSHCDPLTGLCRCL
PGWWGRRCSFKCSCNVSPCAQETGKCECKAGFWGPACQRRCDCLHGSCSPLTGHCSCDPG
YQGRSCRDPCPAGKYGAQCVHSCGSCKRSQPCSPVDGFCLACQPGWNGTLCKEPCDPGFH
GEGCLQLCPRCRHGDVCDPETGFCPRCEPGWMGPSCNISCPAGTFGDGCQFLCPECIVGS
CDPVSGDCICQAGYWGPSCNDTCPEGYFGVNCSSPCQCSRGTCDPIQGDCVLSFKDHGTL
AAAILVPLLLVLLCVTCCCCCGSNPADAADRAAPDDDVVARMKHHVQGVLANLSAMMPCF
TLGGYKLPKVTVSHHDTEIPFNPSFIESPSAAWVSDSSFSSFDTDNEGPEYSVPPREGIP
LLGGAELQDGVSPADEVLPDPSAFNCEDVSQPFTIPRTSSIAKAKRPSVSFAEGTKFGAA
ETPSPGRKPKTPWGPSKLSPSPGDAASEPPAERPASSCYESPEPLSKGEESHRPSPRATP
GGRRRVVSGTRHVAQRVEALEAAAKSGSWEAKGKDPNVTTIYMMVGTAGQDPKTEGSGEG
PVQAVLKRLGSLQKGKWATKEEPKMRRSMEAIQKPPRRALAQNRDSVNSCKQRESVLDSP
NEPSPGKQPGKRRSFLLAFSSLKSTGPQDGGSDAVGATERGKSPESVLSLEQTAPEEEPK
YENVVSSSAESPPSPTKELSATPATT
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccaggcccatcctctgcctccagctgtggctgtgggtgcagagctctgcc
caggagcttgaccccaacggcaagaacgtctgcaggctgcccagcggcccagcgtgctgc
cccggctggaggcaggaagggcaggagtgcacagctgcgctgtgcgagggggcagacgcc
tgcggagtggacgaggtgtgtgtgagacccggggtttgcctttgtaagcctggcttcttc
ggagcagactgcagctctgcctgccctgagcagtactggggccctgactgcaagcggagc
tgcccgtgccaccctaatgggcgctgcgacccagcgagtgggcactgcacctgtgacccc
aaccactggggggagctctgccagttcccttgccagtgcggtccccacggccgctgtgat
cccctcaccggtgcctgccactgcgagccgggctggtgggcacccgcctgcaagaagcaa
tgtcagtgcaacctggccagctcccactgcgaccccctcactggcctctgccgctgcttg
ccgggctggtggggcaggaggtgcagcttcaaatgctcctgcaacgtctcaccctgtgcc
caggagacgggcaagtgtgaatgcaaggctgggttttgggggccggcgtgccagcggcgc
tgcgactgcttacacggctcctgcagccctctcaccgggcactgcagctgcgatcccggc
taccagggcaggagctgccgggacccctgcccagcagggaagtacggggcgcagtgtgtg
cacagctgtgggagctgcaagcgcagccaaccttgctcacccgtggatggcttctgcctg
gcctgccaacctggctggaatgggactctctgcaaggaaccctgtgatcctggcttccac
ggcgaaggctgcctccagctgtgtccccgctgccggcacggggacgtctgtgaccccgag
actgggttctgcccacgctgtgagcctggctggatgggacccagctgcaacatctcctgc
cctgctggcacctttggtgatggatgccagttcctctgccccgagtgcattgtggggagc
tgcgaccctgtgtcaggagattgtatctgccaggcaggatactggggacccagttgcaac
gacacctgcccggagggatattttggtgtgaactgttcctctccttgccagtgctcccgg
gggacctgcgaccccatacagggtgactgcgtgttgagttttaaggaccatgggaccctt
gcagctgccatccttgtccctctcctgctggtgctgctctgtgtcacctgctgttgctgc
tgtggatccaacccagctgatgctgcagacagggctgcgccggacgatgatgtggtggcc
aggatgaagcaccacgtgcaaggagtgctggccaacctcagtgctatgatgccttgtttc
accctcggtggctacaaacttcccaaggtcacagtttcccaccacgacacagaaatcccc
ttcaaccccagcttcattgagtcgccgtcagctgcgtgggtttccgacagctccttctcc
tcctttgacaccgacaacgagggaccagagtactctgtccctcccagagaaggcatcccg
ctgctggggggtgccgagctgcaggatggggtgtccccagctgacgaagtgctcccagac
ccatctgccttcaactgtgaggatgtgtcacaacccttcaccatccctcgcacttccagc
atcgccaaggccaagcggccctctgtgtcctttgctgaggggacaaaatttggggcagca
gagacccccagccctgggcggaagcccaagaccccatggggcccatccaagctgtctcca
tcaccaggggatgcagcatctgaacccccagctgagcgaccagccagcagttgctacgag
agccctgagccactcagcaagggggaagaaagccaccgaccatctccccgggccaccccg
gggggacgccggcgcgtggtctctggcaccaggcatgtagcacagagagtggaggcactt
gaagcggctgcaaaatctggcagctgggaggcaaaggggaaggaccccaatgtaaccacc
atctacatgatggtgggaacagctgggcaggaccccaagacagaaggaagcggtgaggga
ccagtccaggctgtgctcaagcggctgggcagcttgcagaagggcaagtgggctacaaaa
gaggagcccaagatgaggaggagtatggaggccatccagaaaccacctcgccgggctctg
gcacagaacagagactcagtgaacagctgcaagcagagggagagcgtcttggactctccc
aacgagccatcccctggcaagcagcctggcaagagacggtctttccttcttgcattttcc
tcattgaaaagcactggaccccaggatgggggcagtgatgctgtaggtgccacagagagg
ggcaaaagccctgagtcagtcctcagcctggaacagactgccccagaggaagagcccaaa
tacgagaacgtggtcagcagcagtgccgaatccccccccagccccaccaaggagctgtca
gccacccctgctaccacctga
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