Pogoniulus pusillus (red-fronted tinkerbird): 135187588
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Entry
135187588 CDS
T10504
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04142
Lysosome
ppus04144
Endocytosis
ppus05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135187588 (CLTC)
04142 Lysosome
135187588 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135187588 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135187588 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppus04147
]
135187588 (CLTC)
Membrane trafficking [BR:
ppus04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
135187588 (CLTC)
Exosome [BR:
ppus04147
]
Exosomal proteins
Proteins found in most exosomes
135187588 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
135187588
NCBI-ProteinID:
XP_064022490
LinkDB
All DBs
Position
27:10999860..11039286
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQAVPAQAGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatattgccgattcgtttccaggagcatctccagctccaaaatctgggcatc
aacccagcaaacattggcttcagcactctgacaatggagtctgacaaattcatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaattcgaaggccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattaaaagctgggaaaacgcttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcacaccatgacagatgatgtcaccttctggaagtggatctctctgaatactgttgcc
cttgtaacggataacgcagtctaccactggagcatggagggggagtcccagccggtgaag
atgtttgatcgccattccagcctcgctggctgccagatcatcaactaccgcaccgatgct
aagcagaaatggctcctgctgactggcatatccgcacagcaaaatcgtgtggtgggagcc
atgcagctatattctgtagatagaaaagtatcacaaccaattgagggacatgcagccagc
ttcgcacagttcaagatggaaggaaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaggttggcacaccaccttctggaaat
cagccctttccaaagaaagcagtggatgtcttcttccctcctgaggcacaaaatgacttt
cctgttgccatgcagattagtgacaagcatgatgtggtgtttctcataacaaagtatggc
tatatccacttgtatgatctggaaactggcacctgcatctacatgaacagaatcagtgga
gagaccatatttgttactgcacagcatgaagcaacagctggaattattggagtaaacaga
aagggacaagtgctctcagtgtgcgtggaagaagagaatattattccctatatcacaaat
gtgctgcagaatcctgacctagctttacgaatggctgtccgcaacaacctggcaggtgct
gaggaactctttgccagaaaattcaatgcactctttgcacaagggaattattctgaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccgg
ttccaggctgttccagctcaggcaggacagacttcccctttactccagtacttcggcatt
ctgcttgaccaaggacagctgaataagtacgagtccctggagctctgcagaccagtcctt
cagcaggggcgcaaacagctcttggaaaaatggttaaaagaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagatcctacgctggcacttagtgtctatctg
agagccaatgttccaaacaaagtcatccagtgtttcgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggattttcttgctgaggaat
gtcatgagaatcagccctgatcaaggacagcaatttgcacaaatgcttgttcaagatgaa
gagcctcttgcagacataacacagattgtagatgtctttatggaatataatttaattcag
caatgtacagccttcttgctggacgcactgaagaataatcgtccctcagaaggtcccctg
caaacgcgtttacttgagatgaacctcatgcatgcacctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcattatgaccgggctcacatagctcagctgtgtgagaaggct
ggattgctacagagagcactcgaacacttcacggacttgtatgacatcaaacgtgcagtt
gttcacactcatctactcaatcctgagtggttagtgaattatttcggttccttatcggtc
gaagactccctggagtgtctgcgtgctatgttgtctgctaacattcgccagaacctgcag
atctgtgtccaagtagcttcaaaataccacgaacagctgtcaacacagtcacttattgag
ctgtttgaatctttcaagagctttgaaggtttgttttatttcctgggctccattgtaaac
ttcagccaggatccagatgtgcacttcaagtatattcaagctgcatgcaagacaggacaa
attaaagaagtggaaaggatctgcagagaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagttgccactcatcattgtatgtgatcgc
tttgactttgtccacgacttggtgctgtatttgtatagaaataatctccaaaaatacatt
gagatttatgtacagaaggtgaatccaagccgtctgcctgtggttattgggggactgctt
gatgtggactgctctgaagatgtgataaagaaccttatccttgtagtgagaggtcaattt
tcaactgatgagcttgttgcagaggttgagaaaagaaacagactgaagctgcttctgccc
tggctggaagcaagaattcatgagggttgtgaggagcctgcaactcacaatgccctggcc
aaaatatacattgatagcaacaacaacccagagagattcctgcgtgagaacccctactat
gacagccgtgttgttggcaagtactgtgagaagagggaccctcacctggcctgtgtggct
tatgagcgtggacagtgcgatttggaactgattaatgtgtgcaatgagaattccctcttc
aaaagtctctcccgctacttagttcgtcgtaaagaccctgagctgtgggccagtgtatta
ctggaaagcaacccctacagaagacccctcattgaccaggttgtacagactgcactgtca
gaaacacaggaccctgaggaagtctctgtcactgtcaaggccttcatgactgcagatctt
cctaatgagctgattgaactgttggagaaaatagttctggataactcggtgttcagtgag
cacaggaacctgcagaaccttctcattctgacagctattaaggctgatcgcacccgtgtg
atggaatacatcaaccgcctggataactatgatgctcctgacatagccaacatagctatc
agcaatgagcttttcgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtacaggtgttaatagagcacattggaaacctggaccgtgcatatgaatttgctgaa
cgttgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaggggatg
gtaaaggaagcaattgactcatacattaaagcagatgatccttcctcatacatggaagtt
gttcaagctgccaatgccagtggaaactgggaggaactggtgaagtatctccagatggca
cgcaagaaggcccgggagtcatatgtggaaacggaattaatctttgctcttgctaaaaca
aaccgtctggcagagctagaggagtttatcaatggaccaaacaatgcacatatccagcag
gttggtgatcgttgctatgatgagaagatgtatgaagcagctaagctgttgtataacaat
gtgtccaactttggccgtttggcctcaactttagttcacctaggtgaataccaggcagct
gtggatggcgctcggaaagcgaacagtactcgcacgtggaaggaggtctgctttgcttgc
gtcgatgggaaggagttccgcctggctcagatgtgtggactccatattgtggtgcatgca
gatgagttggaagagctaatcaactattaccaggatcgtggctactttgaagagctgata
actatgttggaagcagccctgggacttgagcgagcacacatggggatgtttacagagtta
gccattctctactccaaatttaagccacagaagatgagggagcacttagagctgttctgg
tccagagtcaacattccgaaggttctgagagctgcagagcaggcacatctctgggctgaa
ctggtgttcttgtatgataagtatgaagaatatgataacgccataatcacaatgatgaat
cacccaacggatgcttggaaggaaggccagttcaaagatatcatcacaaaggtggccaac
gtggagctgtattacaaggcaattcaattctatttggaatttaagcctctcttgctcaat
gatctgctgatggtgttgtcccctcggcttgaccacactcgtgcagtcaccttcttcaca
aaggttaaacagttaccgctggttaagccttacctgcgttctgttcagaatcacaacaac
aaatcagtgaatgagtccctgaacaaccttttcattattgaagaagactaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttctctggcccaacgtttggag
aaacatgaacttatagagttccgaagaattgctgcgtacctcttcaaaggaaacaatcgc
tggaaacagagcgtggagctctgtaagaaggacagactgtataaggatgcaatgcagtat
gcttcagaatccaaagacacggagttggcagaagagttgttgcagtggttcttgcaggag
aacaagagagaatgctttggtgcttgtctcttcacctgctatgatctcctaaggccagat
gttgtcctggaaacagcgtggaggcacaacatcatggactttgccatgccatactttatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtctttgagaaaggaagaggagcaggctacagaaacacaacctatcgtt
tatggtcagccacagctgatgttgacagcaggacccagcgtggcagttcctccccaagca
ccttttggctatggctacaccgcacctccctacgggcagccgcagcctggctttgggtac
agcatgtga
DBGET
integrated database retrieval system
