Pogoniulus pusillus (red-fronted tinkerbird): 135187702
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Entry
135187702 CDS
T10504
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135187702 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppus03041
]
135187702 (PRPF8)
Spliceosome [BR:
ppus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135187702 (PRPF8)
Complex C
U5 SnRNP specific factors
135187702 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
135187702
NCBI-ProteinID:
XP_064022734
LinkDB
All DBs
Position
27:9013554..9033272
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPNPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgtcttcccgtatcgcggcggctgcgccccggtgcccaatccgctggcgccg
ctacccgactacatgtctgaggagaagctacaggaaaaagcccgcaagtggcagcagctg
caggccaagcgctatgcagagaagaggaaatttggctttgtggacgcgcagaaggaggac
atgccccccgagcacgtccgcaagatcatccgcgaccacggtgacatgaccaacaggaag
ttccgtcacgacaagcgtgtctacttgggtgctctgaagtacatgcctcatgctgttctg
aagctcttggagaacatgcccatgccttgggagcaaatcagagatgttccagttttgtac
catatcacaggcgccatctccttcgtgaatgagatcccctgggtcatagagccggtgtac
attgctcagtgggggtcaatgtggattatgatgaggcgagagaagagggatcggcgtcac
ttcaagaggatgaggttccctccatttgacgatgaagaacctcctctggattatgctgat
aacatcctggatgtggagcccctggaagccattcagcttgagctggatcctgaggaggat
gctcctgtactggactggttctatgaccaccagccactgaaggacaacaggaagtatgtg
aatggttcaacctaccagcgctggcagttcaccctgccgatgatgtccacgctgtaccga
ctggccaaccagctgctcactgaccttgtggatgacaactatttctacttgtttgacctg
aaggccttctttacttccaaggcactgaatatggctattcctggaggtcccaagtttgag
cctcttgttagggacatcaaccttcaggatgaagactggaatgagtttaatgacatcaac
aagattatcatcaggcagcccatcaggacagagtacaagattgctttcccatacctgtac
aataacctgccacaccacgttcacctgacctggtatcatactccaaacgttgttttcatt
aagacagaggatcctgacctcccagctttctactttgatcctctgatcaaccctatttca
cacagacattctgtcaagagccaggaaccgttgcctgatgatgatgaagagtttgagttg
ccggagttcgtggaacctttcctgaaggataccccactctacacagataacacagccaat
ggcattgcactgctgtgggccccacgacccttcaacttgaggtctgggaggactcggaga
gctcttgatatcccactggttaagaactggtatcgtgagcactgcccagcaggccagcca
gtgaaagtgagagtctcctaccagaagctgctgaagtactatgttctaaatgcactcaag
cacaggccccccaaagcgcagaagaagaggtacctattccgctccttcaaagctacaaag
tttttccagtcgacaaagctggactgggtggaagttggcctgcaggtttgtcgccagggc
tacaatatgctgaacctgctgatccacagaaagaacctgaactaccttcacttggattac
aacttcaacctgaagcctgtgaagactctcaccactaaggaaaggaaaaagtctcgtttt
ggtaatgctttccatctgtgccgtgaggttctgcggctgacaaagctggtggtggacagc
cacgtccaatacagacttggaaatgtggatgccttccagttggcagatggcttgcagtac
atctttgcccatgtgggtcagctgacaggaatgtaccgatacaagtacaaactgatgagg
cagattcgtatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcct
gtgggcaaaggtcctggctgtggcttctgggctccgggctggagggtatggctgttcttc
atgaggggcatcacaccgctgctggaacgctggctggggaatctgctggccaggcagttt
gaaggtcgtcactcaaagggtgtagcaaagactgtcacaaagcagcgtgtggagtctcac
tttgacctggagctgagggcagctgttatgcatgacattctggacatgatgccagaagga
atcaagcagaacaaagccagaaccatcctgcagcatctgagtgaggcttggcggtgctgg
aaagccaatatcccctggaaggtgccagggctgccaactcctattgagaacatgatcctg
agatacgtgaaggcaaaagctgactggtggacaaacacagctcactacaacagggagcgg
atccgccggggtgccactgtagacaaaactgtctgcaagaagaacctgggccggctgacc
aggctctacttgaaagctgagcaggagcggcaacataattacctgaaggatggaccttac
atcactgcagaagaagctgttgctgtgtacaccaccacagtgcactggctggaaagcagg
aggttctcacccattcctttccccccgctgtcctacaagcatgacaccaagttgctcata
ttagccctggagaggctgaaggaagcttacagtgtgaaatctcgcctaaatcagtcacag
agagaggagctgggcttgattgaacaagcttatgataacccccatgaagctctgtccaga
atcaaacgacacctcctaactcagagagccttcaaggaggtgggtattgagttcatggat
ctctacagccacttagttcctgtttatgatgttgagcccctggagaaaatcacagatgct
tacctggatcagtacttgtggtatgaagctgataagcgaagactcttccctccgtggatc
aaacctgctgacactgaacctcctccactgctggtgtacaagtggtgccaaggcattaac
aatctgcaagatgtttgggaaacaagtgaaggtgaatgcaatgtgatgctggagtcccgg
tttgagaagatgtatgagaagattgacctgaccttgctcaacaggctgctgcgtcttatt
gttgatcacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctatgggattattcgtgggctgcagtttgcttccttcatt
gtccagtactatgggcttgtgatggacttgctggtgctgggcctgcaccgtgccagtgag
atggctgggcctccccagatgccaaatgacttcctcagcttccaagacattgccactgag
gtggctcatcccatccgcctcttctgcagatacattgaccggatccacatcttcttcagg
tttacagcagatgaggccagagacttgattcaacgatacctgacagagcatccagatccc
aacaacgagaacattgttggctacaacaacaagaagtgctggccccgggatgctcggatg
cgcctcatgaaacatgatgtgaaccttggccgtgctgtgttctgggatatcaagaaccgc
ctgcctcgttcagtcaccaccgtgcagtgggagaacagcttcgtgtctgtgtacagcaag
gacaaccccaacctcctgttcaacatgtgcgggtttgagtgccgcatcttgcccaagtgc
cgtaccagctatgaggagttcacccacaaggatggtgtctggaacctgcagaatgaggtc
accaaggagcgcacagctcagtgcttcctacgtgtggatgatgagtctatgcagaggttt
cacaacagagttaggcagatcctcatggcttctggctccacaaccttcactaagattgtc
aataaatggaatacagctctgattggcttgatgacctacttcagggaagctgttgtgaat
actcaggagctgcttgatttgctggtgaaatgtgagaataagatccagacccgaatcaag
attggtctgaactccaaaatgcccagccgttttccacccgtggtgttttacacccctaaa
gagctaggggggctgggcatgctctccatgggccatgttctcatcccacagtctgacctg
aggtggtccaagcagacagatgttggcatcactcacttccgctcaggaatgagtcacgag
gaggaccagctcatcccaaatctgtatcgttacatccagccctgggagagtgaattcatc
gactcgcagagggtgtgggcagagtacgcgctgaagcggcaggaggccatagcccagaac
aggcgtctgacgctggaggatctggaggactcgtgggacaggggcattcctcggattaac
acccttttccagaaggacaggcacaccctggcttatgataaaggatggagagtcaggact
gacttcaaacagtatcaggtcctgaagcagaacccgttctggtggacacatcagcgccac
gatgggaagctctggaacctgaacaactaccgcacagacatgatccaggcacttggggga
gtggaaggcatcctggagcacactctgttcaagggcacttacttcccaacgtgggagggt
cttttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gctcagagatcgggtttgaaccaaattccaaacagaagattcaccctgtggtggtctcct
accattaacagagccaatgtgtatgttgggttccaggtgcagctggatttgacaggcatt
tttatgcacggcaagatccccacactgaagatttctctcattcagatattccgagctcac
ttgtggcagaagatccacgagagcattgtgatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagacagtgcagaaggagactatccatcccaggaagtcatac
aagatgaattcctcctgtgcagatatcctgctctttgcctcctacaagtggaatgtgtca
cgtccatcattgcttgcagattccaaagatgtgatggacagcaccaccactcagaagtac
tggatcgatatccagctgcgctggggagattatgactcccacgacatcgagcgctacgcc
agagccaagttcctggactacaccacggacaacatgagcatctacccatcccccactggg
gtgctcattgccatcgatctggcctacaacttgcacagtgcttatgggaactggttccca
ggtagtaaacctctgatccagcaggctatggccaaaatcatgaaggcaaatcctgcactg
tatgtgttgagagaacgaatccgcaagggcctgcagctgtactcatctgagcccacagaa
ccgtacctctcctcccagaactatggagagctcttctccaaccagatcatctggtttgtg
gatgacaccaatgtatacagagtgaccattcacaagacttttgaagggaacttgaccaca
aagcccatcaatggagccatcttcatcttcaatccccgaactggacagctcttcctgaag
atcatccatacatctgtatgggcgggacagaagcgtttaggacagctggccaagtggaag
actgctgaagaagtggctgctttgattcggtctcttcctgtggaggagcagcccaagcag
atcatagtgacgcggaagggcatgttggacccacttgaggtgcacttgctggatttccct
aatattgtgatcaaaggctcagagctgcagctgcctttccaggcctgtctgaaagtggaa
aagtttggtgatctcatcctgaaggctactgaaccccagatggttctcttcaatctgtat
gatgactggctgaaaaccatctcctcctacacggcattctctcgtctgattctgattctc
cgggcactgcacgtcaataatgatcgagccaaagttattctgaagccagacaagacaacc
ataacagagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtggag
gtgcagctgaaggatctcatccttgctgactatggcaagaagaataatgtgaacgttgca
tccctgacacagtcagagatccgagacattatcctgggcatggagatctctgctccctct
cagcagagacagcagattgcagaaattgagaagcaaaccaaggagcagtcccagctgaca
gccacgcagacccgcacggttaacaagcacggggatgaaatcatcacctctacaaccagc
aactacgaaacccagaccttctcctccaagactgagtggcgagtcagagcaatttctgcc
gccaacctgcacctgcgaacgaaccacatctacgtctcgtcggacgacatcaaggaaaca
ggctacacctacattctgcccaagaacgtcctgaagaagttcatctgcatctcagacctg
cgggcccagattgcaggttacctgtatggagtgagcccccctgataaccctcaggtgaag
gagatcaggtgcattgtgatggtgccccagtggggaacacaccagactgtgcatctacct
ggacagctgccacagcacgagtatctcaaggaaatggaacctctggggtggattcacacc
caaccaaatgagtcccctcagctctcaccacaggatgtcaccacccatgccaaggtcatg
gctgacaacccctcctgggatggggagaagaccatcattatcacctgcagtttcacacca
ggctcctgcacgctgacagcctacaagctgaccccgagcggctatgagtggggcaggcag
aacacggacaaggggaacaaccccaagggctatctaccatcccactatgagagggtgcag
atgctgctctcggatcgcttccttggcttcttcatggtcccagcacaggggtcctggaac
tacaacttcatgggtgttcgccatgaccctaacatgaagtacgagctgcagttggccaac
cccaaggagttctaccacgaggtccatcgcccttctcacttcctcaacttcgccctgctg
caggagggggaggtctactctgcagaccgggaagacctctatgcctag
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integrated database retrieval system
