Pogoniulus pusillus (red-fronted tinkerbird): 135187800
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Entry
135187800 CDS
T10504
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135187800 (VPS50)
Membrane trafficking [BR:
ppus04131
]
Protein recycling
Others
EARP complex
135187800 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
135187800
NCBI-ProteinID:
XP_064022879
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All DBs
Position
28:complement(17577936..17621555)
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AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVHDLSPIESFRIPCKEDLRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEVYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQNGLQLAAVICTDGRRHLNIAKEGFTQTSLGLLASHRRRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDVSHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEEAAVSSA
SDGSNVTGAEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSSFKYDDFIFVLD
VTSRLMQVGEEFCGSKSEVLQESIRRQSVNYFKTYHRTRLEELRMFMENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAASTTVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSFSRETLRSRKKSDY
NLYKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPILSSSLSASNREQPSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSADSSGTLSA
AEERKEKVPSPHLSHLVVLTSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDA
LLKEFEGFNRRLAEVSRRVRIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNV
CLGSHINKKSRQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccggcagggtctgagaagtcctcaggagagtgtt
catgacctcagtcccattgaaagctttcggattccctgtaaggaggatctcagagaacta
catgaagaaccaactgatcctcaagctcagcaagaaataattaacagcattgaagaagtt
tatttctccaatgattcctttgatattgtgaagtatgagttagagaggctccctccagta
cttagtctccaagaactggaagtgtacagagacaaattaaaacaacagcaagctgctgtg
tctaagaaagttgcagatttgattcttgaaaagcagcctgcatatgttcaggagctcgaa
cgtgtcacatcgctgcagaatggccttcagctggcagctgttatctgcaccgatggcaga
agacacctgaacatagcaaaggaaggcttcacccagacgagtctggggcttcttgccagc
cacaggaggcgccagctgcttattgggctgctgaagtccctgaggacaataaagacactg
caaagaactgatgtgcgtttgagcgagatgttggaggaagaggactacccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagctgcataagt
gagttgaattcaaagctacaagacaccttggaacaaatagaggagcagctggatgtggca
ctctccaaaatatgcaagaactttgatgtcagccattacacaaaggttcagcaggcttac
aggctgcttgggaaaacacagacagcaatggaccagttgcacatgcacttcactcaagcc
atccacaacactgtctttcaagtcgtgctgggatatgtggagctgtgtgcagggaacaca
gacaccaagtttcagaagttacagtacaaagacctctgcacacatattacctcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
agaaccatgcagtggcatgagaaccatgaccaagatgaggaggcagctgtttcttctgct
tcagatggcagcaatgtgactggagctgaagagaacagttttgaccgcagctacgtaaaa
aagaagctggagcatggactgtcaagaatatggcaggatgttcagctgaaagtgaagacc
tatctcctggggacagatctgtccagcttcaaatacgacgacttcatatttgtgcttgac
gttaccagcaggctgatgcaggttggagaggaattttgtggcagcaagtctgaagttttg
caagaatccatcagaagacaaagtgttaactatttcaaaacctaccaccgaacccgcctg
gaagagttaagaatgtttatggagaatgagacctgggagctgtgtcctgttaaatcaagc
tttagcattctgcagcttcatgagtttaaattcatggagcagtcacgttccccatctgtg
tcacctagcaagcagcctgcttctgcagcttcaaccacagtcactttgtttgagcagtac
tgtaatggaggaaacccctttgaaattcaggctgacagcaaagacgatgagacagaagat
gtcctggcttccaatgggtacgaatcagatgaacaagaaaaaagtgcttatcaagagtat
gacagtgacagtgatgttcctgaagagctgaaaagagattatgtggatgagcagacagga
gatgcccctgtgaaaagtttctctcgagaaactctgaggagcagaaagaaatcagattat
aacctctacaaagtcaatgcacccatcctgaccaacactacactgaatgtcatcaggctt
gttgggaaatacatgcagatgatgaatattctgaagccaattgcatttgatgtgatccac
ttcatgtcccagctctttgattactacctgtacgcagtctataccttctttggccgcaac
gacacgcccatcctgagttcctccctctctgcttctaacagagaacagcccagtgctagg
cagtttgaatcgacgggcctgggcctgagcagcagcagattgcgcaccacactgaacaga
atccaggagagtctgattgacctggaggtctctgctgattcctcaggaactctctcagct
gctgaagagagaaaggagaaggtgccaagcccacacctcagccatttggtggtcttgacg
tctggcaactccctctacggtttggcagagagagtggtggccacggagtctctggtgttt
ctggctgagcagtttgagtttcttcagcctcatctggatgcggtgatgccagctgctaag
aagccttttcttcagcagttctactctcagacagtgtcaactgccagcgaacttcgcaag
cctgtgtactggatcgtggctgctaaagccattgactatgaacagatgctgctgctgatg
gctaatgtcaagtgggatgtgaaggaaatcatgtcacaacacaacatctatgtagatgct
cttctaaaggagtttgaaggctttaaccgaaggctggcagaggtgtcccggcgcgtgcgc
atcccgctgcctgtctccaacatcctctgggagcactgcatacgtttggccaacagaact
cttgtggaaggttatgccaacgtgaagaagtgcagcaatgaaggccgtgccctgatgcag
ctggacttccagcagttcctgatgaaactggagaagctaacagacatcaggcccattcca
gataaggagtttgtggagacctacattaaagcttactacctgacagagaacgacatggag
agctggatcaaagagcacagggagtattccactaagcagttgaccaacctggtgaatgtt
tgtctgggctcccacatcaacaaaaagtcaagacagaagctgctggctgctattgatgac
atagacagacccaaaagataa
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