KEGG   Pogoniulus pusillus (red-fronted tinkerbird): 135187955
Entry
135187955         CDS       T10504                                 
Symbol
SEM1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
ppus  Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03050  Proteasome
ppus03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    135187955 (SEM1)
  09124 Replication and repair
   03440 Homologous recombination
    135187955 (SEM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppus03019]
    135187955 (SEM1)
   04131 Membrane trafficking [BR:ppus04131]
    135187955 (SEM1)
   03051 Proteasome [BR:ppus03051]
    135187955 (SEM1)
   03400 DNA repair and recombination proteins [BR:ppus03400]
    135187955 (SEM1)
Messenger RNA biogenesis [BR:ppus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     135187955 (SEM1)
Membrane trafficking [BR:ppus04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    135187955 (SEM1)
Proteasome [BR:ppus03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     135187955 (SEM1)
DNA repair and recombination proteins [BR:ppus03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     135187955 (SEM1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 135187955
NCBI-ProteinID: XP_064023109
LinkDB
Position
28:16407585..16415089
AA seq 70 aa
MSEKKQPVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcggagaaaaagcagccggtggacctggggctcctggaggaggatgatgagtttgag
gagttcccggcagaagattggactggtttagatgaagatgaagatgcacatgtctgggaa
gacaattgggatgatgacaatgtagaagatgatttctccaatcagttaagagctgaatta
gaaaaacatggctacaagatggaaacctcctaa

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