Pogoniulus pusillus (red-fronted tinkerbird): 135188689
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Entry
135188689 CDS
T10504
Symbol
DEPDC5
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR1 complex protein DEPDC5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
135188689 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135188689 (DEPDC5)
Membrane trafficking [BR:
ppus04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
135188689 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
135188689
NCBI-ProteinID:
XP_064024344
LinkDB
All DBs
Position
30:complement(17604257..17648562)
Genome browser
AA seq
1593 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPEAQRA
SVRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGCNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFQVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKLQTEKAKSNRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FRAVRERESRTRKSSSSYDVSCSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRPHL
HQCEVSSSLGYTSTRDVLENMLESQQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQQDLTHSSAELLE
LAYHEATGRHTSARHLGDSATFLGFSAAEEYSNGLAGSNGAGVNLKTQNKESLEDAVSNS
PDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPEADMDRRDEE
GVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPATAVPPPLSSSPLYSRGLVSRNRPEEE
DQYWLSMGRTFHKVALKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSEFVSCWVEFS
HERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRIVEGEAHCDVY
GDRPRSEEEEWQLLDGFIRFVEALNRIRRRHRSDRMIRKGSAMKGLQIAGPIPTHSLEQP
GPPIGKKGTSALSALLQMEASQKSLGEQQAALLAGKSGGQQSESGGMAITPTYMDSPRKD
GAFFMDFVRSPRTASTFYLQVSIDQSVPATSDGSTLVTTGQLPDRGNTQPSGSSQSIAEQ
GYPTAGAAEGSSQQCSASSLTSSSTLMEILDAMKHPTTGVQLLSEQKGLAPACFISAEVV
HWLVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIVVDKEADRVGM
QQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPASYASRHSSFSR
SFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLSAAFEIKLHWMA
VTAAVLFEMVRDGLHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPXNVSCLLKE
GSEHLFDGFEPETYWDRMHLLQEAIAHRFGFVQDKYSASXFNFPAENKPQYIHVTGTVFL
QLPYSKRKFSCGQQRRRRNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRSSATGDERFAD
RLLXDFTDFCXDKDTRLLAFWTDCLDKMHASAP
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatacataagaagggttttggaggcagtgat
gatgagctggtcgtgaatcctaaagtatttcttcagatcaagctgggagatgtggttgaa
attgcccatcccaatgatgagtacagtcctctgcttctacaagtgaagtccctcaaggaa
gatctgcagaaagaaactatcagtgtggatcagacagtggcacaagtgttccgcctgcgg
ccgtaccaggatgtccacgtgaatgttgtggacccgaaggaggtgaccttggacttggtg
gagctgaccttcaaagatcagtacattgggcgcggggatatgtggcggctgaagaaaagc
ttggtcagcacttgtgcttacgtcacccagaaggtcgagtttgcagggatcagggcacag
gcaggcgaactgtgggtgaagagtgagaaggtcacttgtggctacatcagtgaggacacc
cgggtggttttccgctccacttcagccatggtttacattttcatccagatgagctgtgaa
atgtgggattttgatatttatggggacctgtactttgagaaagctgtgaatggtttcctt
gctgacctcttcacaaaatggaaggagaagaactgtagccatgaggtgacagtagttctg
ttttctagaacattctacgaagccaaatctatagatgagttccccgaagcgcagcgtgcc
tccgtccggcaggaccacgagggaaggttctatgaagatttttacaaagttgtagttcag
aatgagaggcgagaggagtggacctcattgctcgtcaccattaaaaagctcttcatccag
tatcctgtgctggtacgactggagcaagcagagggctttcctccaggctgcaattctacc
tcagcacaagggaactacctcgaggccataaatctttcattcaatgtgttcgacaagcac
tacatcaaccgcaacttcgaccgcaccggccagatgtccgtggtcatcacgcccggcgtc
ggcgtcttccaggtggatcggctgctgatgatcctcaccaagcagcgcatgatcgacaat
gggataggtgtggacttggtgtgcatgggagagcaaccactgcatgctgtaccgctcttt
aagctccataatcgctgtgggcctggtgactccagactgggtgatgactacaatatccca
cactggataaaccacagtttctacacatccaagagccagctgctgtgtaacagctttact
ccacggatcaagctggcgggaaggaagctgcagactgagaaggcaaagagtaaccgagat
gcctcattaggggctccaaaagatgctgagaatgccctgcctatccaggtggattatgat
ggctatgatgcccaggtgttcagactgccaggcccatccagagcccagcgctgtaccacc
ttcagggctgtgagggagagagaaagtcgcaccaggaagagctccagttcctatgacgtc
tcctgcagcccttctctgcagagccgcacactgccccccgaggaggtgaggagccaggct
tctgatgacagctcactgggcaagatctccaacatcctgatgatcccacggcctcatctg
caccagtgtgaagtcagcagctctttgggctacaccagcaccagagatgtccttgagaac
atgctggagtctcagcagcgtgactccagtgcccctgggaggttccacgtgggcagcgca
gagtccatgctgcacgtccggcccggggggtacaccccgcagcgtgccctcatcaacccc
tttgccccgtcccgcatgcccatgaagctgacctccaacaggcggcgctggatgcacacc
ttccccgtgggcccatcaggagaagccatccagatccatcatcagactcgacagaatatg
gcagagatgcagggcaacgggcagcaggatttgacacactcctctgctgagctgctggag
ctggcctaccatgaggccacaggcaggcacaccagcgctcggcacctgggtgacagcgcc
actttcctgggcttcagtgcagcagaagagtactccaacggcctggctggcagcaacggg
gcaggggtgaacctcaaaactcagaacaaggagtccctggaagatgctgtctctaactct
ccagatccaatgccaggcttctgttgtacagttggagtggactggaagtctctcacgact
ccggcgtgcctgcccctcaccacggactacttccctgaccgccagagcctgcagaacgac
tacactgagggttgctatgacctcctcccagaagctgacatggacaggagggatgaggaa
ggagtgcagatgacagcccagcaggtgtttgaggagttcatttgccagcggctcatgcag
ggctatcagattattgtgcagtccaagccacagaagccagccacggccgtgccgcccccg
ctcagcagcagccccctgtacagccgaggtcttgtgtcaagaaaccggcccgaggaagaa
gatcagtactggctgagcatgggcaggaccttccataaagtggcactgaaagacaaaatc
attactgtgactcggtacctgcccaagtatccatacgaatctgctcagataaattacact
tacagcttgtgcccctcacactcagactctgagtttgtctcttgctgggtagagttttcc
catgagagactagaagagtacaagtggaattacctggatcagtatatctgctctgctggc
tctgaggatttcagcctcatcgagtctctcaagttctggcggactcggttcctgctgctg
ccggcttgcatcagcgccaccaagcgcatcgtggagggagaggctcactgcgatgtgtac
ggagacaggccccgctccgaggaggaggagtggcagctgctggacggcttcatccgcttc
gtggaggccctgaaccgcatccggcggcgccaccgctccgatcgaatgatccggaaaggg
tctgccatgaaaggtttgcagattgctggtccaattcccacccactctctggagcagcct
gggcctcccattgggaagaaaggaacctcagcactctcagctctgctgcagatggaagcc
agtcagaagagcctgggggagcagcaggcagcactgctggctgggaagagtggtgggcag
cagtcggagagcgggggcatggccatcacccccacctacatggacagcccgcggaaggat
ggggccttctttatggactttgttcgcagcccacgcacagcctccaccttctacttgcag
gtgtccatagaccagtcagttcctgccacttcagatggcagcacactggtaaccacgggg
cagttacctgacagggggaacacccagccctcgggaagctcccagagcattgcagagcaa
ggatatcccacagctggtgctgcagagggcagctcccagcagtgctcagccagctctctg
acttcctcctccacactgatggagattctcgacgccatgaagcaccccaccacaggggtc
cagctgctctctgaacagaagggcctcgctccggcctgcttcatcagcgccgaagttgtg
cactggctggtgaacaatgtggagggggtgcagacccaggccatggccattgacatcatg
cagaaaatgctggaagagcagctcattgtccatgcatctggagaagctttgagaaccttt
atttatggcttctacttttacaagatcgttgtggacaaagaagcagaccgagtgggcatg
cagcagcctgccatgtggcacacagctgccatggacgacttctctgccttccagaggaaa
tggtttgaggtggcctttgtggcagaagagcttctgcactcggagatcccagccttcttc
ctgccctggctgcccagccgcccagcctcctatgcaagtaggcacagttcctttagccgc
agtttcggaggacggagccaggcagctgcactcttagctgccacggtgcccgagcagcgg
acggtgacgctggatgtggatgtgaacaaccgcacggaccggctggagtggtgcagctgt
tattaccacggcaacttctccctcagtgctgcctttgagatcaagttgcactggatggca
gtgactgcagctgtgctttttgagatggtaagagatgggctgcatcgcaaagccacgtcc
tgcgggttcttactggtgccagtcttggaaggtccctttgctttgcccagttacttgtac
ggagacccacttcgagctcagctgttcatcccanctaatgtgagctgcttgttgaaggag
ggcagcgagcacttgtttgatggctttgaaccagaaacgtactgggaccgtatgcatctc
cttcaggaagcaatagcacacagatttggatttgtgcaagataaatactcagcctctnga
ttcaacttcccagctgaaaacaagccccagtacatccatgtcacagggacggtgtttttg
cagctgccctactccaagcggaagttctcctgcgggcagcagcgccggcggcgcaactcc
accagctccaccaaccagaacatgttctgcgaggagcgcgtgggctacaactgggcctac
aacaccatgctgaccaaaacctggcgctccagcgccaccggcgacgagaggtttgctgac
cgcctgctgnaggacttcaccgacttctgcntggacaaagacacgcgcctgctggccttc
tggactgactgcctggataagatgcatgccagtgccccgtga
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integrated database retrieval system
