Pogoniulus pusillus (red-fronted tinkerbird): 135188697
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Entry
135188697 CDS
T10504
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03013
Nucleocytoplasmic transport
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135188697 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
135188697 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135188697 (THOC5)
03041 Spliceosome [BR:
ppus03041
]
135188697 (THOC5)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135188697 (THOC5)
Spliceosome [BR:
ppus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135188697 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
135188697
NCBI-ProteinID:
XP_064024362
LinkDB
All DBs
Position
30:complement(16256956..16272184)
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AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRGKGDADQDIRYYSEECEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKDNAAEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYKEAPPEISRPAITL
AEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTIDLKCKDESVL
HLTFYYLMNLNVMTVKAKVTTAGELSTAISAGDLLSPDSVLNCLYPGDHGRKTPNPANQF
QFDKVGILTLSDYVAELGHPYVWVQKLGGLHFPKDQPQHTVTADNSLSASHMELTVKLLR
SRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKVVSRLVKWAAIPYEDYAELPYTKDVI
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPVFSLCLSWKGERTSSNDDNIRA
MESEVNVDYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDPSVEGPKEFPQEKMCLR
LVRGPMRLKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggactccagcaagaagaggaagcccaaagtgatccggacagacggcggcccg
caggagggcaagcggggcaagggcgatgccgaccaggacattaggtactacagtgaggag
tgtgaggtggatctccgtgaccccatcaaagactacgaactctacagggagacttgccag
gagctgcagaggctgatggcagaaatccaggagctgaagagcagaggcatcaaggacaac
gctgctgagatagatgagcggcgggtccagagctgtgtccacttcatgaccctgaagaag
ctgaaccgcctggctcacatccgcctcaagaagggcagagaccagacccacgaggcaaag
cagaaggtggatgcctatcacctgcagctccaaaacttgctctacgaggtgatgcacctg
cagaaagagatcaccaagtgcctggagttcaagtccaaacacgaggagattgagctggtg
agcctggaggagttctacaaggaggccccccctgagatcagccgccctgccatcaccctg
gctgagccccaccagcagaccctggcccgcctggactgggagctggagcagcgcaagagg
ctggcagagaagtacaaggagtgcctgaccagcaaggagaagatcctgaaggagatcgag
gtgaagaaggagtacctgagcagcctccagcctcgtctcaacagcatcatgcaggcctct
ctgcctgtgcaggagtatctcttcatgccctttgaccaggcccacaagcagtacgagacc
gcccggcacctgccgccgcctctctacgttctcttcgtccaagccagcgcctacggccag
gcctgcgacaagaagctggtggtggccattgagggtagtgtagaggaagccaaagccctg
tacaagcctcctgaggactcacaggatgacgaaagcgattcggacgtggaggaggagcag
accacgaagcggcgcaggcccaccctgggcgtgcagctggacgacaagcgcaaggagatg
ctgaaaagacatcccctgtccgtcaccatcgacctcaagtgcaaggatgagagtgtgctt
cacctcaccttctactacctgatgaacctcaacgtcatgacagtgaaagccaaggtcacc
actgccggggagctgagcacagccatcagtgctggtgacctgctctccccagactccgtc
ctcaactgcctctacccaggagaccacgggaggaagactcccaacccagccaaccagttc
cagtttgataaagtgggcatcctgaccttgagtgactacgtggcagagctgggccaccct
tacgtgtgggtgcagaagctgggtggcctgcacttccccaaggaccagccccagcacaca
gtcactgcagacaactccctgagtgccagccacatggagctgacagtgaagctgctgcgc
tccaggctgcagtctcgcctggctctccacaagcagtttgcttccctggagcacggcgtt
gtgccagtctccagcgagtgccagcatctcttccccaccaaggttgtgtcgcgcctggtg
aagtgggcagcgattccctacgaggactacgcggagctgccctacaccaaggacgtgata
gaggctggcttggctgaagacactcacctctactacatggccttgatagaaagaggaaca
gccaagctgcaggctgccgtggtgctgaacccaggctactccaccctgccacctgtcttc
agcctgtgcctgtcctggaagggagagcgaaccagcagcaacgacgacaacattcgcgcc
atggagagtgaggtcaacgtggactacaaggagctctggggtcccaaacctggctaccag
ctgctcaccaaccagctccagaggctgtgcatggtgctggatgtctacctggagacagag
cctcacgaccccagcgtggaggggcccaaggagttcccccaggagaagatgtgtctgcgc
ctggtcaggggtcccatgcgcctgaagcccttcaagttcaactaccctcaaggcttcttc
agccatcgctga
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integrated database retrieval system
