Pogoniulus pusillus (red-fronted tinkerbird): 135188942
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Entry
135188942 CDS
T10504
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04142
Lysosome
ppus04144
Endocytosis
ppus05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135188942 (CLTCL1)
04142 Lysosome
135188942 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135188942 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135188942 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppus04147
]
135188942 (CLTCL1)
Membrane trafficking [BR:
ppus04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
135188942 (CLTCL1)
Exosome [BR:
ppus04147
]
Exosomal proteins
Proteins found in most exosomes
135188942 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
135188942
NCBI-ProteinID:
XP_064024837
LinkDB
All DBs
Position
30:complement(1828611..1868875)
Genome browser
AA seq
1672 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAAHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATTVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQSGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLDASESLR
KEEEQVTEPTPIVFGQQLMLAAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcccattcgcttccaggagcacttccagctccaaaacttgggcatt
aacccagcaaacattggatttagtaccctaacaatggaatctgacaagttcatctgcatc
agggagaaagtaggagagcaggcacaagtagtgataattgacatgagtgatccaaccaca
cccatcagacgtccaatttctgctgaaagtgccatcatgaatccagcctccaaagtgatt
gctctaaaagctgggaaaactcttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccacacgatggcagaggaagtgatcttctggaaatggatatctgtgaacacagttgcc
ttggtgacagagacagcagtctaccactggagcatggagggagaatcccaacctcaaaag
atgtttgacagacatgctagtcttgcaggctgccaaatcatcaactacagaacagatgaa
caccaaaagtggctgctgctgatagggatttcagctcagcaaaatcgtgtggttggtgca
atgcagctgtactcagttgatagaaaagtctcccaacctatagagggccacgcagcagct
ttcgctgaattcaaaatagagggaaatgccaaaccttccaccctcttctgttttgctgtg
agaagtcctgcaggaggcaagctacacataattgaagtaggtcagccagctactggaaac
cagccatttgttaagaaagctgtggatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggagttatctacctgatcaccaagtatggc
tatattcacatgtacgacttggagtctggcgtttgcatctacatgaaccgcatcagcgct
gacactatctttgtcacagctgctcatgaacctacctcaggcattattggtgtgaacaag
aaaggacaggtgctttctgtgtgtgttgaggaagacaatatagtgaactatgctacaact
gttctccagaaccctgacctgggcctgcgtatggctatacgtagtaatctggctggggca
gaggagctgtttgccaggaagttcaacacactctttgctcaaggaagctatgcagatgct
gccaaagtagctgcatctgcaccaaagggaattctgcgtaccagtgataccatcaggaag
ttccagagcgtaccagctcagtctgggcaggcctctcccctgctccagtactttggaata
ttgcttgaccaggggcagctgaacaagtttgagtctctggagctctgccgccctgtccta
cagcagggccgcaagcagcttctggagaagtggctgaaggaagacaagctggagtgctca
gaggagttgggagacctggtgaagactgcggacccaacccttgcactcagtgtctatctt
cgtgctaatgtgccaaacaaagtgattcagtgctttgctgagactggccagttccagaag
atagtgctgtatgctaaaaaggttggctacaccccagactggattttcctgctgagaagt
gtgatgagagtcagtccggagcaaggcctgcagttctctcagatgctggtacaggatgag
gagccactggctaacattaaccagatcgtggatgtgttcatggagaacagcctcatccag
cagtgcacctccttcctcttggatgccctgaaaaacaaccgccctgcagaaggccacctt
cagactcgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccattctt
gggaaccagatgtttacacactatgatcgtgctcacattgcccagctgtgtgagaaggca
ggcctgctccagcgagccctggagcactacacggatctctacgacatcaaacgtgctgtg
gttcacactcacctcctgaatcctgagtggctcgtgaacttctttggctctctctcagtt
gaagactctgtggagtgcttgcgtgccatgctgtcagccaacatcaggcagaacctacag
ctctgtgtgcaagttgcttctaaataccatgagcagcttgggactcagtctcttgtggag
ctttttgagtctttcaaaagctacgaagggctgttctatttcttgggttccattgtaaac
ttcagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagactggccag
ataaaggaagtggagaggatttgccgtgaaagcaactgctataacccagagagggtgaag
aattttctgaaggaggcaaagctgactgaccagctgcctctgatcattgtctgtgatcga
tttgactttgtccatgacctggtgctctacttataccggaataacttgcagaagtatata
gaaatctatgtgcagaaggtgaatcctagccgtataccagcagtggttggagggcttctt
gatgtggactgttctgaagatgtcattaagaacttgatcatggtggttagaggccaattc
tcaacagatgagttggtggctgaagtggaaaaaagaaataggctgaagttgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcataacgccctggcc
aaaatctacatcgacagcaacaacaatccggagcgcttccttcgtgagaacccttactat
gacagccgtgtggttggcaaatactgtgagaagagggacccccatctggcctgcgttgct
tatgagagggggcaatgtgatctggaactcataaaggtctgcaatgagaactctctgttc
aagagcgaggctcgctatctggtgcgcaggaaggaccctgagctctgggcaaacgttcta
gaagaaaacaaccccttcaggcggcagcttatcgaccaggttgttcaaacagctttatca
gagacacaggatcctgaggaggtttctgtcactgtgaaagctttcatgactgctgacctg
cctaatgaattgattgagttattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaatctccagaacctgctgatcctgactgccatcaaggctgaccgcactcgtgtg
atggagtacatcaatcggctggacaactacgacgcccctgatattgccaacattgccatc
agtaatgagctgtatgaagaggcctttgctatattcagaaaatttgatgttaatacttca
gctattcaggtgctgattgagcacattggcaacttagaccgtgcttatgaatttgcagag
agatgcaatgagcctgcagtatggagccagctagccagagcacagctccagaaggacttg
gtgaaagaagccattgactcctatataaaggcagatgatccctctgcctatatggaagtt
gttcaagcagctaatagaaatgataactgggaggacctagtcaagttcttacagatggcc
aggaagaaggccagagagtcttatgtagagacagaactcatttttgctttggcaaaaact
aaccgtctgtcggagctggaggagttcattagtggccctaataatgcccacatacagcag
gttggcgaccgctgttacgaggagggcatgtacgaagcggcgaagcttctctacaacaac
gtctccaactttgctcgcctggcttctaccttggtgcacctgggagagtaccaggcagca
gtggacagtggccgcaaagccaacagcacaaggacttggaaggaggtgtgcttcgcctgc
gtggacgggaaagaattccgcttggcgcagatctgtggcttgcacatagtcatccatgct
gatgaactggaggagctgatcagttactatcaggatcgtggctactttgaggaactgatt
gcccttttggaagctgctttgggcctcgagcgtgctcacatgggaatgtttactgaactt
gccatcttgtactccaaattcaagcctcagaaaatgagggaacatctggagctcttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctctatgacaaatatgaggagtatgacaatgcaataattactatgatgaat
catcccactgatgcctggaaagaagggcagtttaaagacataattgccaaggtggccaat
gtggagctgtactacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatcttctgcttgtattatctccacggctggatcacaccaggacagtcaattttttctca
aaggttaatcagctgctcctagtaaagccttacctgcgttcagtccagaaccacaacaac
aaaggagtcaatgaagctctaaacaaccttctaacagaggaggaggattaccagggtttg
agagcttccattgatgcctacgacaactttgataacataacgctggctcagcgcctggag
aagcacgaactgatcgagttccggcgcatcgcagcctacctctacaagggcaacaaccgc
tggaaacagagcgtggagctgtgcaagaaagaccacctgtataaggatgctatgcagtat
gctgcagagtccaaagatgcagagctagcagagaagctgcttcagtggttcctggaagaa
ggcaagcaggagtgctttgcagcctgcctgttcacgtgttacgacttgctgcacccagat
gtagtccttgagcttgcatggaggcataacatcatggactttgcaatgccttatttcatc
caagtgatgagagaataccttaccaaagtggataaacttgatgcttctgaaagcctaaga
aaagaagaggaacaagtaactgaacccactccaatagtatttggccagcagctgatgtta
gcagcaggccccagtgcagtacctccccaggcaaacttcccgtacggatacacagcgcca
ggattcacccagccgcctgtttacggtttcaatatgtaa
DBGET
integrated database retrieval system
