Pogoniulus pusillus (red-fronted tinkerbird): 135189069
Help
Entry
135189069 CDS
T10504
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03030
DNA replication
ppus03410
Base excision repair
ppus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135189069 (POLE)
03410 Base excision repair
135189069 (POLE)
03420 Nucleotide excision repair
135189069 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppus03032
]
135189069 (POLE)
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135189069 (POLE)
Enzymes [BR:
ppus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135189069 (POLE)
DNA replication proteins [BR:
ppus03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
135189069 (POLE)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
135189069 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
135189069
NCBI-ProteinID:
XP_064025118
LinkDB
All DBs
Position
30:1258797..1321888
Genome browser
AA seq
2998 aa
AA seq
DB search
MPSLDPQLSLKHPCQSPFFPARRSKTPAAKHREPLPSLPLGCTAPSHRERGLDAPWRPAP
CHREPVPGTAGGEGRSCRLRRSVRSGAAAGPQPPAGALPVAGCRLAGHGGQCRPCGPGWR
ERSRGAGSQLQATPTRAPMPSAGSPQARRAGCDNPDTGPAPLGSKPAEANPPLTPPRLCH
RPAAPAARGSPAASPPDPSRAGAGQPGHASRGAHSTAPPTPCRPAPRPGRLPPPAAPSGC
PRSGWNRCPPLPGEGEPTPRLLRLLPGQPGALRPSKPGQASSGAAGGQAEAGPGAPSSPR
CRLGHCCTSAAAKAKRRSRPAPLPRARPARRIPLPAAGPLRLPSSRAPESRRAAATPAIP
LPGNAGEAPGRLQRAPAPPPPRSATPRMSAGRGPGTGPRRPHRLPGQRRRARPVPGGAER
AGAAPAPASGARGPRRPFLLPGTRPRAGRAQRRSGAGRAGHQRLSPGHSPAGTFPAHSFG
SPCCVRISLLPPLEAGTCPRSCLPRTFLSSPLPEGPQGSLRWFWLLVATPRRSPPEETRA
GHDLKASPRGEALLSRPLPGPLRGCSAATAARGRPEPSARRPRRHRARNGGSGRGGGGAG
PSGKGRGTHPPLGRGKGTHPSAIGGTQRLGGRGCSLIGGELFVPARAGRSAGNCCRGGER
SRTEPSCAEQSRTEPSRAGPGMLPRGGGRRAQRGGGGEPQGARWGGRRAPGAREPAAGAE
AAAAAAASGRDEGSALSALKRLERSQRTDQLDALFGFERLAEPGERTGWLINMHPTEVLD
EDRRPVSAVDYYFIQEDGSRFKVALPYQPYFYIATQKGCEREVSSFLSKKFQGKIAKLET
IPKEDLDLPNHLVGLKRNYIKLCFSTVEELVKVRREIAPAVRKNREREQASDIYTAMLSS
ALSGGSLSTEEEEGPCRKAASQMEHIVDMREFDVPYHVRVAIDLRIHVAHWYSVRYRGSA
SPPDITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREI
VSEDIEDFEFTPKPDYEGPFCVFNEPDEAHLIQRWFEHVQQTKPNIIVTYNGDFFDWPFV
EARAAAHGISMSQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSHGLKAAAKAKL
GYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEV
LRKGSGTLCEALLMVQAYHANIIFPNKQEQEFSKLTADGHLLDSETYVGGHVEALESGVF
RSDIPCRFRMNPAAFEFLLQQVEKTLRHAIEEEEGLPLEQVTNFQQVCEEIKAKLTSLKE
VPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWR
GEFMPASRSEFHRIQQQLETEKFPPLFPEGAPRAFHELSREEQAKYEKKRLADYCRKAYK
KIHVTRVEDRVTTACQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLCAALESGEASAVR
RCRNMEVLYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGASIITQARELIEQ
IGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNMLVKEGFTNEQYQE
LQDAASLTYVTRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFE
VKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAAHMPDSELFEL
IAENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTER
AIPLAIFQAEPSVRKHYLRKWLKSSSLQDFSIRAILDWDYYIERLSSTIQKIITIPAALQ
QVKNPVPRVPHPPWLHKKLLEKNDVCKQQKISELFSLEGKRQVLASRPAQGTPSSQPGDI
EDLGAARPQLAAVPIASKRKRVPAAEESQQLSQDLELSQSWREILGPPPPLGTTKEERLL
WLRYHQKKWELQARQRRERRKRRRLEAGAVPAGVVRDAHSRGLGSYLRRTARSILDLPWQ
IVQVAESSQPGLFRLWALIGSDLHCIRLSIPRVFYVNLRLPKPQEEGAAYRKVNRILPRS
NLVYNLYEYSVPEELYQEHINEINADLSAPDIEGVYETQVPLLLRALIQLGCVCMVSRQL
LGQLAGREADTFEMEQLEMCSLAQFTYLEPGSIRHIYLYHSCQGSRALLGLFIPWQRKAA
VFVLDKVRTNQLPNLATLFSAERGALLQKVGKELLPPDQHSFEVRAEAEPKAVHRALQRL
LLAYKDERRGPTLVAVQSTWELKRLASAIPVLEEFPLVPIRLADDISYSVLDWQRHAARR
MLRHYLNLDTRLCQALEMSRYYHIPLGNLPEDISTFGSDLFFSRHLRRHNHLLWLSPTAR
PDLGGKEADDNRLVMEFEERASVEINNPGCYCTVCLELDIQGLAVNTVLQSHHINDMEGG
SSMSISFDVIQQASLADMVTGNQAAHVPASYDQTALCSSTFRILKSMVVSWVKEITQYHN
VYADNQVIHFYRWLRSPASLLYDPALHRMLHTMMKKLFLQLVAEFKRLGSSVVYANFNRI
ILCTKKRRIEDALGYMDYIINSIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIKGRVDP
RVHYGEKDSSKRQALEEEEEDSEEEEEAAAGEEEEEEEGETNVEELLENNWNIVQFLPQA
ASCQSYFLMIVSAYIVAVYHSMKEELRRNAPGSSPVRRRSSSQACQEALRDTGAMPGMIT
FSQEYVAKELTQSFFSITQKIQRKVSASCHAREPSDLFPVLPGSHLPLNNPALELIKCVC
KVLSLDANVTNQVTKLRRDLLRLIEVGEFSAAAQFQDPCRSYVLPEVICRNCNFCRDLDL
CKDSAASSQDGSVPPSWVCSSCQAPYDTAAIEAALVEALQKQLMAFVLQDLVCKKCQGVK
EAHMPLYCSCAGDFALTISSQAFRDHVGVFQGIAQHYGMAFLLETIEWLLHTSPQLQH
NT seq
8997 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctggacccgcagctgtctctgaagcatccatgccagagtcctttcttccct
gctcgcagaagcaaaactccggctgcgaaacaccgagagccgctcccaagcctgccgctg
ggctgcacggcgccgtcccaccgggagcgggggctggacgcgccctggcgccctgcgcct
tgccaccgggagcctgtgccgggaacggcagggggagaaggacgaagctgccgcttaagg
cgctccgtgcgcagcggcgccgccgccggtccccagccccctgccggcgctctcccggtt
gcgggctgcaggctcgccgggcacggcggtcagtgccgcccctgcgggccgggctggcga
gaacggagccgcggcgctggctcccagctccaggcgacgccaaccagagcgccaatgccg
agcgcaggctctccccaggcgcggagggctggatgcgataatccagacacgggaccagca
ccgcttggctcgaagcccgccgaggccaaccctcccctgaccccgccgaggctctgccac
cgcccagcggctccggctgcccggggctctcccgctgccagcccacccgatcccagccgt
gccggggcagggcagcccggccacgcttcccgaggtgcccacagcacagcaccgcccacc
ccctgccgccccgcaccgcgcccgggccggctgccccctcccgcagcgcccagcggctgc
cctcgctcgggctggaaccgctgccccccgctgcccggcgaaggcgaacccacaccgcgg
ctcctgcggctgctgcccggtcagcccggggctctgcgaccctcgaaaccgggacaggcg
agctcgggggccgcgggggggcaggccgaagcggggccgggagcgccgtcctcgccgcgc
tgccgcctcgggcactgctgcacctcggcagctgcgaaagccaagcgccgctcccgcccc
gctccgctgccccgggcccggcccgcccggcgcatccccctgcccgctgcggggccgctc
cgcctcccctcttcccgtgcccccgagtcccggcgggcagcggcgaccccagcgatcccc
ctgcccggcaacgccggcgaggccccgggcaggctgcagagagcacccgccccaccccca
ccccgctccgcgacccccaggatgagcgccgggaggggacccgggacgggacctcgccgc
ccgcaccgcttacctgggcagcggcggcgagcgcggccggtcccgggcggcgcggagcgg
gcaggagcggccccggcaccggcgagtggagcgcggggtcctcgccggcccttcctgctc
ccgggcacacggccccgggctggccgcgcacagaggcgctccggcgcgggcagggctggg
caccagcgcctgtcccccggacacagcccggccgggaccttcccggcgcactccttcggc
tctccctgctgcgttcgcatttctctgctcccccccttggaggcagggacctgtccccgc
tcctgcctgccccgcacgtttctctcctcccctctgcccgaaggccctcaaggctctctc
cgctggttttggctccttgtggccacaccacggcgctccccgcccgaggaaaccagagcg
ggtcacgacctgaaggcctccccgaggggcgaagctctcctgtcacggcctttacccggg
cccctgcgcggctgcagcgcagccacagccgcccgaggccgccccgagcccagcgcccgc
cggccccgccggcaccgcgcccggaacggcggcagcggccgcggcggcggcggggcgggg
ccgagcgggaaggggcggggaactcacccgccattggggcggggcaaagggacgcacccc
tctgccattggtgggacgcagcggctcggggggcggggctgttctctgattgggggagag
cttttcgttcccgcgagagctgggcgaagcgcgggaaactgctgccgcggcggcgagcgg
agccgaaccgagccgagctgtgccgagcagagccgaaccgagccgagccgtgccgggccg
gggatgctgccgcggggtggcgggaggcgcgcccagcggggcggcggaggagagccccag
ggagcgcggtggggcgggcggcgggcgcccggggcccgagagccggcggcgggggctgag
gcggcggcggcggcagcagcatccggccgggatgaaggctccgcgctgtccgctctcaag
cggctggagcgctcgcagcgcacggaccagctggatgcgctgttcggcttcgagcggctg
gcggagcccggcgagcggaccggctggctcatcaacatgcacccgacggaggtgctggac
gaggaccgccggccggtgagcgctgtggactactacttcatccaggaagatgggagccgc
ttcaaggtggccctgccttaccagccctacttctacatcgccacccagaagggctgcgag
cgagaagtgtcctccttcctctccaagaagttccaagggaagattgcaaagctggaaaca
atccccaaggaggacctggacctgcccaaccacctggtgggcctgaaaaggaactacatc
aagctgtgcttcagcacggtggaggagctggtgaaggtgcggagggagatcgccccggcc
gtgaggaagaacagggagcgggagcaggccagcgacatctacacggccatgctgtccagc
gctctgagcgggggcagcctcagcacggaggaggaggaggggccctgcaggaaggctgcc
agccagatggagcacatcgtggacatgagggagttcgacgtcccctaccacgtgcgcgtc
gccatcgacctccggatccatgtggcacattggtacagcgtccggtaccgcggcagcgcc
tccccgcccgacatcacccgcagggacgacctggtggagcggccggaccctgtggtgctc
gcctttgacattgaaaccaccaagctgcctctgaagtttcctgatgcagagacagaccag
atcatgatgatctcctacatgatcgatgggcagggctacctgatcacgaacagggagatt
gtctctgaggacattgaggactttgagtttactcccaagccagactatgagggtcccttc
tgtgtcttcaatgagccagatgaagctcatttaatccagaggtggtttgagcatgtccag
cagaccaaacccaacatcattgtcacatacaatggagacttctttgactggcccttcgtg
gaagcaagagcagcagcccatgggatcagcatgtcccaggagattgggttccagaaggac
agccagggagagtacaaagcctcccagtgcatccacatggactgcctgaggtgggtgaag
agggacagctacctgccggtggggagccacggcctgaaggcggcagccaaggcaaagctg
ggctatgacccggtggagctggaccccgaggagatgtgcaggatggccacggaggagcct
cagaccttggccacctactcggtgtcggacgccgtcgccacctactacctgtacatgaag
tatgtgcaccccttcatctttgccctctgcaccatcatccccatggagcccgacgaggtg
ctgcggaagggctcggggacgctgtgcgaggcactgctgatggtccaggcctaccatgcc
aacatcatcttccccaacaagcaggagcaggagttcagcaagctgacagcagatggccac
ctgctggactccgagacctacgtgggaggccacgtggaggccctggagtctggggtcttc
cgcagcgacatcccctgccgcttcaggatgaaccctgctgccttcgagttcctgctgcag
caggtggagaagaccctgcgccacgccatcgaggaggaggaggggctgcccctggagcag
gtcaccaacttccagcaggtctgtgaggaaatcaaggccaagctgacttccctgaaggaa
gttcccaacaggattgagtgtcctcttatctaccacctggacgtgggggccatgtacccc
aacatcatcctgaccaacaggctgcagccctcagccatggtggatgaggctacctgtgct
gcctgtgacttcaacaagcctggtgccaactgccagcgccgcatgacttggcagtggaga
ggagagttcatgcccgccagccgcagcgagttccaccgcatccagcagcagctggagaca
gagaagttccctcccctgttccccgagggagctcccagagccttccacgagctgtcccgg
gaggagcaggccaagtatgagaagaagaggctggcagattactgtcgcaaggcctacaag
aagatccatgtcaccagggtggaggacagggtcaccactgcctgccagcgcgagaactcc
ttctacgtggacactgtgcgagccttccgcgaccgccgctacgagttcaaggggctgcac
aaggtgtggaagaagaagctgtgtgcggcgctggagagcggagaggcctctgcagtgagg
cgctgcaggaacatggaggtgctctacgagtccctgcagctggcacacaaatgcatcctc
aactccttctatggctacgtcatgcgtaagggggcccgctggtactccatggagatggct
ggcatcgtgtgcttcacgggggcgagcatcatcacccaggccagggagctgatcgagcag
atcgggaggcctctggagctggacaccgatgggatttggtgtgtgctccccaacagcttc
ccagagaactttgtcatcaagtcaaccaatgccaaaaagccaaaggtgaccatctcctac
ccaggtgccatgctgaacatgctggtgaaggagggcttcaccaacgagcagtaccaggag
ctgcaggacgcagcctccctcacctacgtcacccgcgccgagaacagcatcttcttcgaa
gtggatggcccctacctggccatgatcctgcctgcatccaaggaggagggcaagaagctg
aagaagaggtacgctgtgttcaacgaggatgggtccctggccgagctgaagggctttgag
gtgaagcgccgcggggagctgcagctggtcaagatcttccagtcctcagtgttcgaagcc
ttcctgaagggcagcaccctggaggaggtctatgcctcggtggccaaggtggctgattac
tggctggatgtgctctacagcaaggctgcccacatgcctgactcggagctgttcgagctg
atcgccgagaaccgctccatgtcgcgcaggctggaggactacggcgagcagaagtccacc
tccatcagcacggccaagcgcctggcagagttcctgggcgaccagatggtgaaggatgca
ggcctgagctgcaggttcatcatctccaagaaaccagaaggctctcctgtcaccgagagg
gccatccccttggccatcttccaggccgagcccagcgtgcgcaagcactacctgcgcaag
tggctgaagagttcctccctgcaggacttcagcatccgcgcgatcctggactgggactac
tacatcgagaggctgagcagcaccatccagaagatcatcaccattcctgctgccctgcag
caggtgaagaacccagtgccccgggtgcctcaccccccctggctgcacaagaagctgctg
gagaagaatgatgtctgcaagcagcagaagatcagtgagctcttcagcctggaaggcaag
aggcaggtgctcgccagccgacccgcccagggcacccccagctcccagcctggggacatc
gaggaccttggggctgccaggccccagctggcagcggtgcccatcgccagcaagcgcaag
cgagtccctgcggcggaggagagccagcagctgtcgcaggacctggagctgtcccagtcc
tggagggagatcctgggtcctcctccacccctgggcaccaccaaggaggagaggctgctc
tggctgcgctaccatcagaagaagtgggagctgcaggctcggcagcggcgggagcggcgc
aagcggcggcggctggaggcaggggcggtgcccgcgggcgtcgtgcgcgatgcccactcc
cgggggctgggcagctacctgcgcaggacagcccgcagcatcctggacctgccctggcag
atcgtgcaggtggcagagagcagccagcctgggctgttccggctgtgggcactgatcggc
agcgacctgcactgcatccggctcagcatcccccgcgtcttctacgtcaacctgcgcctg
cccaagccccaggaggagggagcagcctacaggaaggtgaacaggatcctgcctcgctcc
aacctggtctacaacctctacgagtactccgtgcccgaggagctctaccaggagcacatc
aacgagatcaacgcagacctctctgccccagacatcgagggggtctatgagactcaggtg
ccgctgctgctgcgtgccctgatccagctgggctgtgtgtgcatggtcagcaggcagctg
ctggggcagctggcagggcgagaggctgacaccttcgagatggagcagctggagatgtgc
tcgctggcacagttcacctacctggagccaggaagcattcgccacatctacctctaccac
agctgccagggcagcagggcactgctgggcctcttcatcccctggcagcgcaaagctgct
gtcttcgtgctggacaaggtccgcaccaaccagctgcccaacctggccacgctgttctcg
gcggagcgtggggcgctgctgcagaaggtgggcaaggagctgctgccccccgaccagcac
agcttcgaggtgcgcgcagaggccgagcccaaggctgtgcacagagccctgcagcgcctg
ctgctggcatacaaggacgagcgccgcggccccacgctggtggctgtgcagtccacgtgg
gagctgaagcggctggccagcgccatccccgtgctggaggagttccccttggtgcccatc
cgcctggcagacgacatcagctactcggtgctggactggcagcgccacgctgcccgccgc
atgctgcgccactacctcaacctggacactcgcctctgccaggccttggagatgagcagg
tactaccacatccccctcgggaacctgcccgaggacatctccaccttcggctccgacctg
ttcttctcgcgccacctgcggcgccacaaccacctcctgtggctgtcccccacggcccgc
cccgacctggggggcaaggaggctgacgacaaccgcctggtgatggagttcgaggagaga
gcctctgtggagatcaacaaccctggctgctactgcacagtgtgcctggagctggacatc
cagggcctggctgtgaacaccgtgctgcagtcccaccacatcaacgacatggagggaggc
tccagcatgagcatcagcttcgatgtgatccagcaggcgtccctggcggacatggtgaca
ggcaaccaagctgcccacgtcccggccagctatgaccaaaccgccctctgctccagcacc
ttcaggatcctgaagagcatggtggtgagctgggtgaaggagatcacacagtaccacaac
gtctacgcagacaaccaggtcatccacttctaccgctggctccgctcccctgcctccctg
ctctacgacccagcgctgcaccgcatgctccacaccatgatgaagaagctcttcctgcag
ctggtggctgagttcaagcgcttgggctcctcggtggtttatgccaacttcaaccgcatc
atcctgtgcaccaagaagcggcgcatcgaggatgccctcggctacatggactacatcatc
aacagcatccactccaaggagatcttccactctctgaccatctccttctcccgctgctgg
gagttcctgctctggatggatccagccaactacggagggatcaaggggagagtggatcct
cgcgtgcactacggggagaaggacagcagcaagaggcaagcgttggaggaggaggaggag
gacagtgaagaagaggaggaggcggcggcaggggaagaggaggaggaggaggaaggagag
acaaacgtggaggagctgctggagaacaactggaacatcgtccagttcctgccccaggct
gcctcctgccagagctacttcctgatgatcgtctcggcctacatcgtggccgtgtaccac
agcatgaaggaggagctgcggcgcaacgcccccgggagcagccccgtccggaggaggagc
agcagccaggcgtgccaggaggcgctgagggacacgggggccatgcccggcatgatcacc
ttctcccaagagtatgtggccaaggagctcacccagagcttcttctccatcacccagaag
atccagaggaaggtctctgcctcctgccacgccagggagccctcagacctcttccccgtg
ctgcctggctcccacctgccgctcaacaacccagccctggagctcatcaaatgcgtctgc
aaggtcctctccttggacgccaatgtcaccaaccaggtgaccaagctgcgccgggacctg
ctgcgcctgatcgaggtgggggagttctccgcagcggcgcagttccaggacccctgccgc
tcctacgtcctgcccgaggtcatctgcaggaactgcaacttctgcagggacctggacctc
tgcaaggactctgctgccagctcccaggacgggtcggtgccccccagctgggtgtgctcc
agctgccaggctccatacgacaccgctgccatcgaagctgcgctggtggaggcgctgcag
aagcagctgatggcctttgtgctgcaggacctggtgtgcaagaagtgccagggcgtgaag
gaggctcacatgcccctgtactgcagctgtgctggagacttcgccctcaccatctcctcc
caggccttcagggaccacgtgggcgtgttccagggcatcgcccagcactatggcatggcc
ttcctgctggagaccatcgagtggctgctgcacaccagcccccagctgcagcactga
DBGET
integrated database retrieval system
