Pogoniulus pusillus (red-fronted tinkerbird): 135189107
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Entry
135189107 CDS
T10504
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135189107 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135189107 (HBS1L)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135189107 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
GIP1_N
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
135189107
NCBI-ProteinID:
XP_064025182
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All DBs
Position
31:9557416..9615703
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AA seq
687 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPTAFAEPLEEEYD
YEGTDDTAEYFTSGHQLTEADRARLNSCLDQMREVLAESVPEPTMVQAVLDSNFDVQKAL
DIVLSQDSKQNVKTKNEDAVIVRKTTKGKTRDSQSARMESEIVPKITKMTVSGKKQSMGF
EVPCVTAEENGHVNTPQKGVLTEDASVASRVLEGVSKSSLSPQVMEVSEEQNVVPTPVKK
SGKTKQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGDNLVTRGQSSDLTQWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPNEPIKVCTRFRARVLIFNIEVPITKG
FPVLLHYQTVSEPATIKRLLSVLHKSTGEVTKKKPKLLTKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggctataactacgatgaagattttgaagatgatgat
gtgtatggccaatcggtagaagatgattattgcatttctccatcaacagcagctcagttt
atctactccagacgagacaaaccaacagcatttgctgagccattagaagaagaatatgac
tatgaaggtacagacgacactgctgaatattttacatctggtcatcagttgactgaagct
gatagagctcgtcttaattcatgtcttgatcaaatgagagaagttttggcagagtctgtg
ccagagccaacaatggtgcaagcagtactggatagtaattttgatgtacagaaggctttg
gacattgtgctttcacaagacagtaagcaaaatgtcaagaccaagaatgaggatgctgtg
attgtaagaaagacgacaaaaggaaaaacaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaaattaccaaaatgacagtgtctggaaagaaacagtctatgggattt
gaagttccatgtgtgactgctgaagaaaatggccatgtgaacacacctcagaaaggagtg
ttaactgaagatgccagcgtagcttcccgagtccttgagggagtctcaaaatcttctctt
tcacctcaagtaatggaggtttcagaagagcaaaatgtagtgcctactccagtaaaaaag
tcaggcaagacaaaacaacaaatagatgtgaaagcagagttggagaagagacaaggaggg
aagcaactgcttaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcatctactctatctcttgggaaatgtgaacaaaagaactatgcacaaatatgaacag
gagtcaaagaaggctggcaaggcttcatttgcctatgcatgggtcttggatgaaactggt
gaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaatttgagacaaagact
aaagtaattacactgatggatgctccaggccacaaagacttcattccaaatatgatcaca
ggagctgcacaggctgatgtggctattttggtcgtggatgctagcagaggagagtttgaa
gcagggtttgaaacaggcggacaaactcgagaacatggtttattagtgcgctctcttgga
gtgacacagctagctgttgcagtcaataaaatggaccaggtgaattggcagcaggaaaga
ttccaggaaattaccagcaagcttggtcagtttcttaaacaagctggctttaaggaatca
gatgtagcttatattccaacgagtggccttggtggtgacaatctggtcacaaggggccag
tcaagtgacctcacacagtggtacaaaggaaagtgtttgctagagcaaattgattctttc
aagccaccacagagatcagtggataaaccatttaggttgtgtgttgctgatgtttttaaa
gaccaaggatcaggattttgtgtgactggtaagatagaagcaggctatattcaagttgga
gaacgacttctggctatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcat
gatgaaccagttgattgggctgcagcgggagatcatgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgttggctgtgtattttgtgatccaaatgagcccattaaagtt
tgcactcgtttcagagctcgggttctcatcttcaatattgaggttccaatcactaaagga
tttcctgtgcttttacactatcaaactgtaagtgaacctgccactattaaaagactgctg
agtgtcctacacaaaagcactggtgaagtgacaaagaaaaaacctaagttattgactaaa
ggacagaatgctctaatagaactacaaactcaaagacctgttgctctagaactgtataaa
gattttaaagagcttggaaggtttatgttacgttatagtggttctactattgctgcagga
gtcgtcacagagattaaagagtga
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