Pogoniulus pusillus (red-fronted tinkerbird): 135189995
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Entry
135189995 CDS
T10504
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135189995 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppus03041
]
135189995 (PRPF4)
Spliceosome [BR:
ppus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135189995 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
135189995
NCBI-ProteinID:
XP_064026913
LinkDB
All DBs
Position
35:complement(1508613..1523740)
Genome browser
AA seq
536 aa
AA seq
DB search
MATARPPAARGGARPAVRAPAPAEATKSKPPEEGEAPPAKRAPIFYGSLEEKERERLAKG
ESGLLGKEGMKAAIEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDS
EVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTW
YHEGPRSLKTARLWLANYSLPRAVKRLEEARLFKEIPEATRTSQRQELHKSLRSLNNFCS
QIGDDRPLSYCHFSPSSKLLATACWSGLCKLWSVPDCNLIHTLRGHTTNVGAIVFHPKST
VSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHS
WRLWDLEAQEEILHQEGHSKGVYDIAFHIDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH
LKEIYGINFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVRFEPNHGNFLL
TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcgcggcctccggctgcccgcggcggcgcccgccccgccgtgcgtgccccc
gctcctgcggaggccaccaagagcaagcctcctgaagagggtgaagctcctccagccaag
agagctcccattttctatggcagcctggaggagaaggagagggagaggctggcgaaggga
gagtcaggactgctgggaaaggaagggatgaaggcagccatcgaggctggcaacatcaac
ataagcagtggggaggtttttgacctggaggaccacatgagcgagcggcaggcggaggtg
ctggccgagttcgagcggcgcaagcgggcgcggcagatcaacgtctccaccgacgactcg
gaggtcaaggcctgcctgcgtgccctgggcgagcccatcacgctcttcggagagggcccc
gccgagaggagggagagactaagaaacatcctctcagtggtgggcacagatgccttgaaa
aagaccaggaaagatgatgacaggtctaaaaaatccaaggaggagtatcagcaaacttgg
taccacgaaggaccacgcagcctgaagacagccaggctgtggcttgccaactactccctc
cccagggcagtgaagaggctggaagaggccaggctgttcaaggagatcccagaggcaacc
aggacgtcgcagaggcaggagctgcacaaatccctgcgatccttgaacaacttctgcagc
cagattggggacgaccgccctctgtcctactgccacttcagccccagctccaagctgctg
gccacagcctgctggagtgggttgtgcaagctctggtccgtgcctgactgcaacctcatt
cacaccttacgaggacacaccaccaatgtaggagccatagttttccaccccaaatccact
gtctccctggacaagaaggatgttaacctggcctcatgtgcagctgatggctctgtcaaa
ctctggagccttgaaagtgatgagccagtggcagacatcgaagggcacagcatgagagtg
gctcgtgtgatgtggcacccgtccgggaggttcctgggtactacctgctacgaccactcc
tggcgcctgtgggacctggaggctcaggaggagatcctccatcaggaggggcacagcaaa
ggggtctacgacatcgccttccacatcgacggctctctcgcgggcaccggtgggctggat
gctttcgggcgggtgtgggacctgcgcacaggacgctgcatcatgttcctggagggccac
ctgaaggagatctacggcatcaacttctcccccaacgggtaccacgtggcaacgggcagc
ggcgacaacacctgcaaggtgtgggacctgcgccagaggaagtgcatctacaccatccct
gcccaccagaacctggtcaccggcgtcaggtttgaacccaaccacggcaacttcctgctg
accggcgcctacgacaacaccgccaagatctggacccaccccggctggtccccgctgaag
acgctggcagggcacgaggggaaggtgatgggcctggacatctccctcgatgggcagctc
attgccacctgctcctacgacaggaccttcaagctgtggacagcagagtag
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integrated database retrieval system
