Pogoniulus pusillus (red-fronted tinkerbird): 135190194
Help
Entry
135190194 CDS
T10504
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135190194 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135190194 (NUP188)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135190194 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
135190194
NCBI-ProteinID:
XP_064027289
LinkDB
All DBs
Position
35:complement(14116186..14139699)
Genome browser
AA seq
1747 aa
AA seq
DB search
MHMVMSESELSLGSGFVAFLLCTHSAQVLLKERWQQMFRPIQCLLLSQFLCSTGVQEGYS
YVKESEWGQRVSTELKANLLPLCFSPKEVERNMALVYFGPFSLRRSCSRRVFIVLFCLQT
VLQDERQSQALMLKLADYYYEERLCVLRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELV
PNYRRQFEALYKAEAPTWETHGSLMTERQVSRWFVQCLREQALLLEVIFLYYAYFEMAPE
ELLVFAKLFKEQGFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDR
TEEHKLAKNQSIHQEMDRQLLQLGDLPHHAPVLLAWALLRHTIGPEEAAGTVRRLGSAAI
QLGAFQHLTRLLRALSAAGTNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEV
LAASSIPQLFWKTEPTAGLGIILDSVCGMFPHFLTPLLQLLQALVSDKSTAKKVYSFLDK
MSFYIELYKHRPPDVVPQEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYL
VRWEYSYSSWTLFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPI
TSRIYMLLQRLTTVISPPVDVIASCINCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSM
NHVISAEGMNAGGYGNLLMGIEQPQGEYRVTIAFLNLLTTLVRGQLGSTQSQGLVPCIVF
VLKEMLPNYHKWRYSCHGVREKIGCLILQLIHAILNLCPEMDPCSSSAPSLQSLCVFSLA
NTEAGQAVINIMGIGVDTIDLVMASQPGSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPS
SVVSPLEQALTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLG
SDAAAIRDAFLTRLQSRIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEF
SLGEWSCLQVVLELIDCKHQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWE
NLTSPLFGTLPPPSQSSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLQSFSSKKR
FTYWSEYVRLLAQHVAETEGSSCASMPEYQMLFSAWRMLLIISTSHADIMHLSDSAVHQQ
LFMDVLSGTKALLLVHTSGSCLHLGSMLCTLLLILLKQWKSCLSSVDKILNSLTQILEGV
LQAEQPMERTRAKVFSALVAVLQMKELRVAEVPQYSQLVLCVCQTLQDEALALCDQTRHS
LVLGEAAEDKDSMETEEACRARHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQVTRKVPV
LPTIFTALEISLRVKQNLHFTEASLHLLLTLARTQQGAAAVAGAGVTQSICLPLLSVYQL
SSNGAIQGSASSRRSLDAPSWPGVYRLCMSLMERLLKTLRYNFLTEALDFVGVHQERILQ
CLTAVRTVQSLACLEEADHTVGFLLQLSNFTKEWHFHLPQLMRDVQVNLCYLCQACTSLL
HSRKMLQHYLQAKNGDSLPGGVAPRVQRAAGAGGRAPSGEEAAEQRALLPVQYSLLKILS
KSLAALRHFTPDVCQILLDQSLDLAEYSVLFVLSFTTPAFDSDVAPSFGTLLATVNVALN
MLGELDKKKEPFPQTAGLNVQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPGVHPRDK
QRMKQELSSELSTLLSSLARYFRRGGPSSPASGVLPSPQGKAASKLGAEGQEPLLQLVQA
FVRHVQR
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggtcatgtctgagtctgaactgagcctgggaagtggctttgtagctttcctc
ctctgcacccacagtgctcaagtgctgctaaaggaaagatggcagcagatgttcaggcct
atccagtgcctcctcctgtctcagtttctctgcagcacaggagtgcaggagggttacagc
tatgtgaaggagagcgagtggggtcaaagagtgagcacagaattaaaagcaaatcttttg
cctttgtgcttctctccaaaagaagtggaaagaaacatggctctggtgtatttcggccct
tttagtctgaggcgttcctgcagcagacgagtctttattgtgctgttttgcttgcagaca
gttctccaggacgagaggcagagccaggctctgatgctgaagctcgccgactactactac
gaggagcggctctgcgtcctgcgctgcgtgctccacctgctcacctactttcaggatgag
aggcacccgtacacagcccagtacttccagtgcgtcgagaagctggacaaggagctggtt
cctaactaccggcggcagttcgaggcactgtacaaagctgaggctcccacctgggaaaca
catggaagtctgatgacggagcggcaggtgtcacgctggttcgtgcagtgcctgcgggag
caggccctgctgctggaggtcatcttcctctactatgcatactttgagatggcccccgag
gagctcctggtgtttgcaaagctgttcaaggagcagggcttcggcacgaggcaaaccaac
aggcacctggtggacgagagcatggatcacctggtggaccgcatcggctacttcagcgct
ctcattctggtggagggcatggaaattgactccctccatgagcgtgctttggatgacagg
acagaggagcacaaattggccaaaaaccagagcatccaccaggagatggacaggcagctg
ctgcagctgggggacctgccgcaccacgcccccgtgctgctggcctgggcgctgctgcgg
cacaccatcggccccgaggaggcggcgggcaccgtgcgcaggctgggcagcgctgccatc
cagctcggcgccttccagcacctgacgcggctgctgcgcgccctcagcgcggccggcacc
aactgcactgccagtacggcctgcatgtgcatttatgggctcctgtccttcgtcctgaca
tcgctggagctgcacaccctgggcaaccagcaggacatcatcgatgctgcatgtgaagtt
ctggcagcctccagcattcctcagctcttctggaagacggaacctactgcaggtctgggc
atcatcctggacagtgtgtgtgggatgttcccccactttctcactcctctccttcagctg
ctccaagcccttgtgtctgataaatcgactgcaaaaaaggtgtacagcttcctggacaag
atgtccttctacatcgagctgtacaagcacaggccgccggacgtggtgccgcaggaggac
ggcacgctctggaggaggcaggcgcccaagctgctctaccccctcgggctgggtcagacc
aacctgcggatacctcagggcaccgtggggcaggtgatgctggacgacagagcctacctg
gtgcgctgggagtactcctacagcagctggaccctcttcacctgcgagatcgagatgctg
ctgcacgtcgtgtccacggcagatgtgatccagcactgccagagggtcaagccaataatt
gatctggttcataaggtgatcagcactgatgtgtccatagcagattgcctcctgcccatc
acatcacgcatctacatgctcctgcagaggctgacaactgtgatctctccccccgtggat
gtcattgcctcctgcatcaactgcctgacggtgctggctgcccgcatgccagccaaggtg
tggactgaccttcaccacacagggttcctgccctttgttgccaaccctgtgtccagcatg
aatcatgtcatcagtgcagaggggatgaatgctgggggctatggaaacctattgatgggc
atagagcagccccagggcgagtacagggtgaccatcgccttcctcaacctgctcaccacg
ctggtccgggggcagcttggtagcacccagagccaggggctggtgccctgcatcgtgttc
gtgctgaaggagatgctgcccaattaccacaagtggcgttacagctgccacggagtgaga
gagaagattggatgcctgattctgcagctgattcatgctatcctgaacctgtgccctgaa
atggatccttgcagcagcagtgcccccagccttcagtcgctgtgtgtcttcagcctggcc
aacactgaggcagggcaagctgtcatcaacatcatgggcatcggggtggacaccatcgac
ctggtgatggcctcccagcctggcagtgacgagtcccaggggcaggggcagctgctgatc
cagacagtgaagctggcattctcggtcaccaacaacgtcatccgcctgaagcccccctcc
agtgtggtgtcccccctggagcaggccctgacccagcacggtgcccacgggaacaacctg
attgcagtcctggccaagtacatctaccacaagcatgaccccgcgctgccgcgcttggcc
atccagctgctgaagcgcctggccacggtcgctcccatgtctgtctacgcctgcctgggc
agcgatgccgctgccatccgcgatgccttcctgacccgcctgcagagcaggatcgaggac
atgaggatcaaggtcatgatcctagagtttctcacagtggcagtggagacacagcctggg
ctcatcgagctgttcctcaacttggaggttaaggatggcagcgatgggtcaaaggagttc
agcttaggggagtggagctgcctgcaggtggtcctggagctgatagattgcaagcatcag
gagcggtactggtgccccccccttctgcaccgcgctgccatcgccttcctgcatgccctg
tggcaggaccggcgggacagtgccatgctggtgctgaggacaaagccaaagttctgggag
aatttgaccagccctctctttggaacccttcctccaccttcacagtcatcagagcttagt
gtcttggacacctgtgccttaatcatgaaaatcatctgcttggagatctactacgtggtc
aagggctctctggaccagtccctgaaggacaccctgcagagcttctccagcaagaagcgc
ttcacctactggtcagagtacgtccggctgctggcccagcacgtggcggagaccgagggc
agcagctgtgcctccatgcctgagtaccagatgctcttctcagcctggaggatgctgctc
atcatctccaccagccacgcagatatcatgcacctgagtgactctgcagttcaccagcag
ctctttatggatgtgctcagtgggaccaaggccttgctcctagttcacacgtcaggatcc
tgcctgcacctgggctctatgctctgcaccctgctcctgatcctgctgaagcagtggaag
agctgcttgagctctgtggataaaatcctaaactccttgacgcagatcctggagggagtg
ctgcaggcggagcagccgatggagagaaccagggccaaggtcttctcggctctggttgct
gtgctgcagatgaaggagctgagagtggcggaggtgccgcagtactcgcagctggtgctg
tgcgtgtgccagacgctgcaggacgaggccctggcgctctgcgaccagacacggcacagc
ctggtgctgggcgaggcggcagaggacaaggacagcatggagacggaggaggcctgcagg
gccaggcacaaggaccagcgtgacggggtttgtgtcctgggcctgcacctggccaaagag
ctctgtgaggttgatgaagatggggactactggctgcaggtcaccaggaaagtccctgtg
cttcccaccatcttcactgccttggagatcagcctgagagtgaagcagaacctgcacttc
acagaggcctccttacacttactgctgaccttagcaaggacgcagcagggagcagcagca
gtggctggggctggtgtcacccagagcatctgcctgcccctgctgagtgtgtaccagctc
agcagcaacggagccatccagggctctgcctcgtcgcggcgctctctggatgccccgtcc
tggcccggggtctatcgcctctgcatgtcactgatggagaggctgctcaagactctcagg
tacaacttcctgacggaggccctggactttgttggtgtccaccaggagaggattcttcag
tgcctgacggcggtgcggacggtgcagagcctggcctgcctggaggaggctgaccacacc
gttggcttcctccttcagctctccaatttcaccaaggagtggcacttccacctgccacag
ctcatgagggacgtgcaggtgaatctttgctacctgtgccaggcctgcacctccctcctg
cacagccgcaaaatgctgcagcactacctgcaggccaagaacggggactcgctgccgggt
ggtgtggccccgcgggtgcagcgggcagcgggggcgggcgggcgagcgcccagcggtgag
gaggcggcggagcagagggcactgctgcctgtgcagtacagcctgctcaagatcctcagc
aagtctctggctgccctgcgacacttcacccctgacgtctgccagatcctcctcgaccag
tcactggacctggctgagtacagtgtgctcttcgtgctgagcttcaccaccccagcattc
gactccgatgtggcaccctcctttggcaccctccttgccacagtcaatgtggccctcaac
atgctgggagagttggataagaagaaggaacctttccctcagactgcagggctgaatgtg
caagagggaaccaaaaccctcaagtcgctgctgatgttcaccatggagaactgcttctac
ctgctgatctcgcaggccgtgcgctacctgcgggacccaggcgtgcacccccgcgacaag
cagcgcatgaagcaggagctcagctccgagctgagcactctgctgtccagcctggctcgc
tacttccgccgcgggggcccctcctcgcccgccagcggagttctgccctctccccagggc
aaggcagcctccaagctgggcgccgaggggcaggagccgctgctgcagctggtgcaggcc
ttcgtgcgccacgtgcagaggtag
DBGET
integrated database retrieval system
