Pogoniulus pusillus (red-fronted tinkerbird): 135190253
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Entry
135190253 CDS
T10504
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppus03037
]
135190253 (WHRN)
Cilium and associated proteins [BR:
ppus03037
]
Primary cilia and associated proteins
USH complex and associated proteins
135190253 (WHRN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
CCM2_C
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
135190253
NCBI-ProteinID:
XP_064027466
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All DBs
Position
35:complement(3393952..3470047)
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AA seq
952 aa
AA seq
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MSAELDGMSVHSSSSSSGSLGSAAGPAPRPLSANVRRLHQALTALLSEAERERFILCLNA
YHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPP
APTPPPVIPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGD
QILGVNGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSP
PTGLPHHQNSSLRKDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYIT
GVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLMMTVKDIGRLPHART
TVDETRWIASSQIGDTLVGSAGYELLWAHTAARRGAVGNHAAEATARPVFYRGLAGSQVT
LSSMVNQTRVMLEEQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFS
LLSEVRGVISPQDLDRFDNLVLKREIESMKARQPAGPGLGTDSYSMMSYSDTVSSSSSHF
TATTVSSARERLLWLIDLMENTSELEGGGDSHQSSINTLPDISLDDLSSFPDEPPNFKPP
PPPSAAQPLDPSAAQHRNPGKDKPKRPSSESSQSGLFFVAPRNPSPPPSHPEKDTVSMTS
TATTSTEESAPSAIYATISPAPHGARRQMDAQLSLVSQHPIGPFPRVQSPTRLKTPSPDG
PAAAGLQSPSSPSPPPPPSHPAPPPPDKGSPQAVANQHFIMVEVHQPNSEPDVNEVRPLP
QARASTLSQLSDSGQTLSEDSGVDIGEVETSGKDKSRQPVPGKSRSLKEATRSEGVAEGA
CKPRCYLLSPQPGLLEPTSCLIRVSKSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNC
GKLKVGHVILEVNGTGLQGKEHREAARIIAEAFKLKEKDYIDFLVTEFNVAL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagctggacggcatgtcggtgcactcctcctcctcgtcgtcgggctcgctg
ggctcggcggcgggaccggctccgcggccgctgtcggctaacgtgcggcggctgcaccag
gcgctgacggcgctgctgagtgaggcggagcgggagcgcttcatcctctgcctcaatgcc
taccacggccgccgcaacgtctgcgacctggtgcgctccctccgtgctctcctcgacgga
ccccgccgccggcagctcctgccgctgctccgcctcgtcctgccgcgctccgaccagctc
ctcttcgaccagtacactgccgaggggccctacttgccgccgcccggccggcccccgcct
gccccgaccccgccgccggtgatccccggtgagctgcggcaggtgaccctacggcggagc
aaagcccacgagggtctgggcttcagcatccgcggcggggccgagcacggcgtcggtatc
tacgtgtccctggtggaaccgggctccctggccgagcgtgaggggctgcgcgtcggtgac
cagatcctgggggtcaacggcaagtctctggacagggtgacccacgccgaggctgtaaag
gtgctgaaaggctgcaagaagctgaacctgtctgtccactccgtggggcgcatcccgggg
ggctacgtcaccaaccacatctacacctgggtggacccccagggccgcagtgtgtccccc
cccacggggctgccccaccaccagaacagctccctgcgcaaggacagcgagaagaggagc
cacctgcagctgctgcaggagggagacgagaagaaggtgaatctggtcctgaatgaaggg
aagtccctgggcctcatgatccgaggaggagcagagtactccctgggcatctacatcacc
ggggtggataagggctcagaggcagagagcactggcttgaaggtaggggaccagatcctg
gaggtgaacggcaggagcttcctcagcatcccccacgacgaggcggtgaagctgctcaag
tcctcgcgccacctgatgatgacggtgaaggacatcgggaggctgccccacgcccgcacc
acggtggacgagacgcgctggatcgccagctcccagatcggggacaccctggtgggctca
gcagggtacgagctgctctgggctcacaccgccgcccgccgcggggcagtgggcaaccat
gctgcggaggcaacagccaggcctgtgttttaccggggcctggctggctcccaggtgacg
ctgagcagcatggtgaaccagacccgggtgatgctggaggagcaggctcgccacctgctg
aacgagcaggagagggccaccatgggctactacctggatgagtacaaggaaggcaacatc
tccgtggatgctctggtcatggctctcttcgagctgctcaacacacatgctaagttctcc
ctgctttcagaggtgcggggggtgatctccccacaagacctggaccgctttgacaacctg
gtgctgaagagggagatcgagtccatgaaggctcggcagcctgccgggcccggcctcggc
accgactcctactccatgatgtcctacagcgacactgtctcctcctccagcagccacttc
actgccaccaccgtcagctcagcccgggagcggctcttgtggctgatagacctgatggag
aacacatcagaattggagggaggtggagacagccaccaaagtagcatcaacaccctgcca
gacatctccctggatgatctctcctccttcccagatgaaccacccaacttcaagcctcca
cctcctccttcagccgctcagccgctggacccctctgctgcccagcacaggaacccaggg
aaagacaagcccaagcgcccttcctccgagtcctcccagtcaggcctcttcttcgtggcc
cctcgaaacccctctcccccccccagccaccccgagaaggacacggtcagcatgacttcc
actgccaccacctccaccgaggagtcagcccccagcgctatctatgccaccatctcccca
gccccgcacggcgccaggaggcagatggatgctcagctctccttggtcagccaacacccc
atcggtcccttccccagggtccagtccccaacgaggttgaagaccccatccccagacggc
cctgcagctgctgggcttcagagcccctcttccccgtcccctccacctcccccatcccac
cctgctccccctccaccagacaagggcagcccgcaggccgtggccaaccagcatttcatc
atggtggaggtgcaccaacccaacagtgagcctgacgtcaatgaagtgaggcccttgccc
caggccagagcctccacgctctcccagctgtcggacagcgggcagaccctcagcgaggac
agcggggtggacatcggggaggtcgagacgagcggcaaggacaagagccggcagccggtc
cctgggaaaagccgaagcctcaaggaggccacgaggagcgagggggtggcagaaggggcc
tgcaagccgcgctgctatctcctctccccacagccagggctcctggagcccacctcctgt
ctgatccgggtgtccaagagtgcacctaccctggggatcgccatcgaggggggagcgaac
acgcggcagccactgccccgcatcgtcaccatccagcgtgggggttcggcacacaactgt
gggaagctgaaggtgggtcacgtcattttggaggtgaacggcaccgggctgcagggcaag
gaacaccgggaagccgcccgtatcatcgctgaagcctttaagctgaaggagaaggactac
atcgattttttggtcacagaattcaacgtcgccctttag
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