Pogoniulus pusillus (red-fronted tinkerbird): 135190396
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Entry
135190396 CDS
T10504
Symbol
CROCC
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppus03037
]
135190396 (CROCC)
Cilium and associated proteins [BR:
ppus03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135190396 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
135190396
NCBI-ProteinID:
XP_064027819
LinkDB
All DBs
Position
36:2333449..2405409
Genome browser
AA seq
2018 aa
AA seq
DB search
MSSPLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNAISERLEQSLRLEAGEREAA
ESRSLAQHNIELRRLLEEEQAAYKRKLQAYQEGQQRQAQLVQKLQAKVLQYKKKCGEVEQ
QLLEKETELEQERLTGQLDVSSSQLDEESSNELENALIRLEEEQQRSSSLVQVNSMLREQ
LEQANAANAALSQDIRRLTADWARARDELQQREVEWRREEESFNTYFSNEHSRLLTLWRQ
VVAFRRHFGEMKATTERDLSELSHEASRASRAAHAACLHLAANLRLAESQAGAAREQQQM
RLAQLEERAQDADREKAALGARLAELVVALERLRGEDEEKEQRVETLRLQLQQLEASRAQ
EPSPAEVEALRSELEQLRGTLQDITQSVLAQDPEHQESPSASPPCPPPTSPHHSLTTVQA
ALRHRQLQLQDARSQAEASREVAEGLQRELGDSKQQLGALERRLQELSAEAEGCRRAQDE
ALCEVARLRVEAEGLRRERLRAEAALAAEQQRAGALQQERAQLQRQGEGLEDARAEAARD
AEATRQQLQHSQQQVEQLEAQRAAAQQELLEAREALSRAALEAEVARGEQEALAEALAKA
QGSCGELAAAQRAAAAEEGRLRDALAKTSELAAGLAREKTELSRSLARLEEERERGRGRT
RELLQELGRLRAQLERGRGTGAAELQGLERARRAAEEGRRGLRAELRALRAQHQRLRQHL
GQAVQEQGAAGEALAQARGEQERLRQELLRLSHARGALAKEGASLSVQLAAAQRHGQDQA
QEVARLRSEKEGLESSIFQLQEQLAQLDARNQQLEAEGRTQLQAKETLEAALGAARRAWE
QERRQEREQALRARRQAVAAAEAAAVAVTLQNARDSHRGELGSLQRQKEELEAERGRLAL
EQEELAAELAALRRQRQSEKQQALALQEEERAAMAKTLAGLQQSLAEATAELEQQRREVT
THQEKEQSLAAELRCLRLQLEEATAAQELQAKALRDQAAAAAQQRDTALREAEEARAEVR
LVAAARAAGRQELLEAQREARESREGWEAQRRQAQEARRALGDEAREKETLRRSNEELRA
ALRRAEGQRISLKRASEEKEQRLALLEDGRAAADREVSELRAALREVERARLDARRELQE
LRRQVKDLDSENSKRSKEVGELQARVAREEQREEESRREAFGLRQKVVESEADVEAAKKE
LQQLQRRLAEAEAEFGQREKDLARSLEEARGNEKKLLADARNLQLKVEAAREEAAELSLR
LSAAEGRAQGLEAELARGEALRRAAESRLGGIQSALRRTMGIGRARPGAPSKGGGPEGSG
SPSSPPGPEAAAEPEAVRAALREFLRQLQDAQREKEELRVQVGSLSQRLAEVEEERDKAG
REAQQLQKLLAESEEGAGRGGGQLGSAQAALLLQEERLRRGERELRALRDKAAALERSLR
HAEGERRVAQEKLSAVRASEAELEDARRRLEAAESRSSRLELQQRVLEGELQRARAALGE
RQAEARALQDRAELLQKQLAASEQRAGALQLATERLSAALAASGDAPSVPPAVPDGQERL
LQLQSTLTAGELDRRLLQEGLDVARQALAEARQEKAALREQLQALQAEQEALQRSKDELE
AQGQQQQEGLQQQVLSLQRALARAQGEQRAAQRQALLLEKDHSALRSTLGKVEREKLGTQ
EASRRLSAQHEQLARSLGSAQRQLAQAQDRVRLLQVRAACGTHGSCPLGTAWGSGQLREM
LLGLGGLQPSASGSARNATAESPRTVRPEPTPPTPHANPPPPPTRGAHTEPRERRPPWFP
HHARPSPHSQGCPREIQTPPPHTHTSPWAVQDAIGGPDATPMGYAWGSTQDAIPGGGGSA
VVHATPRGAYAMQPEVHAKGDQPAGGGPGRDASPTPRGQCAMQAEVHAQRKAPWAIRDAT
VGPRKMQPTSSGGVHSTMHPPPPPLPPTPLPDRPRCNQRSTHNATPRGARRVLPWAPPPP
RSPQHPEEADTRGPPTPTPHPGPAPAPTSATHSVPSPR
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccgctgtcgctgcaggaggagaaccgcatcctgcagcaggagctgtcgcgc
gtggaggacctgctggcgcagagccgcgccgagcgcgacgagctggccatcaagtacaac
gccatcagcgagcggctggagcagagcctgcggctggaggcaggcgagcgggaggcagca
gagagccgcagcctggcgcagcacaacatcgagctgcggcggctgctggaggaggagcag
gctgcctacaagcgcaagctgcaggcataccaggagggacagcagcggcaggctcagctg
gtgcagaagctccaagccaaggtgctgcagtataagaagaaatgtggcgaagtggagcag
cagctgctggagaaggagacagagctggagcaggagaggctgacgggccagctggatgtg
agcagctcgcagctggacgaggagagcagcaacgagctggagaatgctttgatccggctg
gaagaggagcagcagaggagcagcagcctggtgcaggtgaactcgatgctgcgggagcag
ctggagcaggccaacgcggccaacgcggcgctgagccaggacatccgcaggctgaccgca
gactgggcgcgggcccgcgacgagctgcagcagcgcgaagtggagtggaggcgagaggag
gagtccttcaacacctacttcagcaacgagcacagcaggctgctgaccctctggagacag
gtggtggccttcaggcggcacttcggggagatgaaagccaccaccgagagggatctgtcg
gagctgagccacgaggcgtcgcgggccagcagagctgcccacgctgcctgcctgcacctg
gctgccaacctgcggctggcagagagccaggctggggctgcccgggagcagcagcagatg
aggctggcacagctggaggagagggcacaggatgctgatcgggagaaagctgcccttgga
gccaggttggcagagctggtggtggccctggagcggctgcggggtgaggatgaggagaag
gagcagagggtggagacgctgaggctgcagctacagcagctggaggcctctcgtgcccag
gaaccctccccagcagaggtggaggctttgcgctccgagctggagcagctccgtgggacg
ctgcaggacatcacccagtcggtgctggctcaggaccctgagcaccaagagtccccctca
gcgtcccctccgtgtcctccccccacgtcccctcaccacagcctcaccaccgtccaggct
gccctgcgccaccgccagctccagctgcaggatgcccggagccaggcagaggccagccgg
gaggtggccgagggcctgcagcgggagcttggggacagcaagcagcagctgggggcgctg
gagaggaggctgcaggagctcagcgctgaggctgaaggctgccggcgggcgcaggatgag
gccctgtgcgaggtggctcggctgagggtggaggctgagggcctgcgcagggagcggctg
cgggcagaggcagcgctggcagcagagcagcagcgggcaggtgccctgcagcaggagcgg
gcacagctgcagcgccagggcgaggggctggaggatgcccgcgccgaggctgcccgggac
gctgaggccactcgccagcagctgcagcacagccagcagcaggtggagcagctggaggcg
cagcgtgcggcggcgcagcaggagctgctggaggcgcgggaggcgctgagccgcgcggcg
ctggaggctgaggtggctcggggcgagcaggaggcgctggctgaggcgctggcaaaggcg
caggggagctgcggggagctggcggcggcgcagcgggcggcggcggccgaggagggcagg
ctgcgggatgccctggccaagaccagcgagctggcggcggggctggctcgggagaagacg
gagctgagccggagcctggcgcggctggaggaggagcgggagcggggccgcggccgcacc
cgggagctgctgcaggagctgggccggctgcgggcgcagctggagcggggccgcgggacc
ggggccgccgagctgcaggggctggagcgggcccgcagggcggccgaggagggcaggcga
gggctgcgcgcagagctgcgggcactgcgcgcccagcaccagcgcctgcgccagcacctg
gggcaggcggtgcaggagcagggcgcagcgggcgaggcgctggcacaggcgcggggcgag
caggagcggctgcggcaggagctgctgcggttgagccatgcccgcggggcgctggccaag
gaaggagccagcctgagcgtccagctcgccgccgcccagcgccacggccaggatcaggcc
caggaggtggccaggctcaggtcggagaaggaggggttggagagcagcatcttccagctg
caggagcagctggcccagctcgatgcccgcaaccagcagctggaggccgagggccggacc
cagcttcaggccaaggagacgctggaggcggcgctgggtgcagctcggcgggcgtgggag
caggagcggcggcaggagcgggagcaggcgctgcgggcgcggcggcaggcggtggcggcg
gccgaggcggcggcggtggcggtgaccctgcagaacgcccgcgacagccaccgcggggag
ctgggcagcctccagcgccagaaggaggagctggaggccgagcggggtcggctggcactg
gagcaggaggagctggcagctgagttggcagcgctgcggcggcagcgccagagcgagaag
cagcaggcactggcactgcaggaggaggagcgggcagcgatggccaagacgctggcaggg
ctgcagcagagcctggcagaggccacggctgagctggagcagcagcgccgagaggtcacc
acgcaccaggagaaggagcagagcctggcggcagagctgcgctgcctgcggctgcagctg
gaggaggcaacggcggcgcaggagctgcaggcgaaggcactgcgggaccaggcggcggcg
gcggcgcagcagcgagacactgccctgcgggaggcggaggaggctcgggcggaggtgcgg
ctggtggcggcggcgcgggcggcagggcgccaggagctgctggaggcgcagagggaggcc
cgggagagccgggaagggtgggaggcgcagcggcggcaggcgcaggaggcgaggagagcc
ctgggggacgaggccagggagaaggagaccctgaggcgctccaacgaggagctgcgggcg
gctctgcgccgcgccgaggggcagcgcatcagcctgaagcgtgccagcgaggagaaggag
cagcggctggcgctgctggaggacgggcgggcggcagcagacagggaggtgagcgagctg
cgagccgccctgcgggaggtggagcgtgcccgcctcgatgcccgccgagagctgcaggag
ctgcgccgccaggtgaaggacctggacagtgagaacagcaagaggagcaaggaggtgggg
gagctgcaggcgcgggtggcccgggaggagcagcgggaggaggagagccgcagggaagcc
ttcggcctcaggcagaaggtggtggagagtgaggctgatgtggaggctgccaagaaggag
ctgcagcagctgcagcggcggctggcggaggcggaggcggagttcgggcagcgggagaag
gacctggcgcgcagcctggaggaggctcggggcaacgagaagaagctgctggccgatgcc
cgcaacctgcagctgaaggtggaggcggcgcgggaggaggctgcggagctgagcctgcgg
ctgagcgccgccgagggccgggcgcaggggctggaggcagagctggcccgcggcgaggcg
ctgcgccgggcggcagagagccgcctggggggcatccagtctgccctgcgccgcaccatg
ggcatcggccgggcacggcccggcgcccccagcaagggtgggggccctgagggctcaggg
agccccagctcacccccgggccccgaggcagcagccgagcccgaggcggtgcgggcagcc
ctgcgggagttcctgcgccagctgcaggatgcccagcgggagaaggaggagctgcgggtg
caggtgggcagcctgagccagcggctggcagaggtggaggaggagcgggacaaggctggc
agagaggcgcagcagctccagaagctgctggctgagagcgaggaaggggcagggcgcggc
ggggggcagctgggcagtgcccaggccgcgctgctgctgcaggaggagaggctgcggcgc
ggcgagagggagctgcgggcgctgagggacaaggcggcggcgctggagcggagcctgcgg
catgcggagggcgagcggcgagtggcacaggagaagctgagcgcggtgcgagccagcgag
gccgagctggaggatgccaggcggcggctggaggcggcagagagccggagcagccgcctg
gagctgcagcagcgggtgctggagggcgagctgcagcgggcacgggcggcgctgggcgag
cggcaggcggaggcgcgggcactgcaggaccgagctgagctgctccagaaacagctggca
gccagcgagcagcgcgccggtgccttgcagctggccacggagcggctgagcgcggcgctg
gcagccagcggcgatgccccgagcgtgccaccggcggtgcccgacggccaggagaggctg
ctgcagctccagagcaccctgaccgccggcgagctcgaccgacggctgctgcaggagggg
ctggatgtggcgcggcaggcgctggcggaggcgcggcaggagaaggcagcgctgcgggag
cagctgcaggcactgcaggctgagcaggaggctctgcagcggagcaaggacgagctggag
gcacagggccagcagcagcaggaggggctgcagcagcaggtgctgagcctgcagcgggca
ctggcgcgggcacagggtgagcagagggcagcccagcgccaggccctgctcctggagaag
gatcacagcgccctcaggagcaccctgggcaaggtggagcgggagaagctgggcacgcag
gaggcctctcggcggctctctgcccagcatgagcagcttgcccgctccctgggcagcgcc
cagcgccagctggcacaggcgcaggaccgcgtccggctgctacaggtgcgggctgcctgc
ggcacccacggcagctgcccgctgggcacagcctggggctcaggccagctgcgggagatg
ctgcttgggctgggagggctgcagccctcggcaagtgggtccgcgcgaaacgcaaccgcg
gagagtccacgcacggtgcggccagagcccaccccccccaccccccacgccaaccccccc
cctccccccacccgtggggcccacacggagccacgcgaaaggcgacccccgtggttcccg
caccatgcgagaccctccccccactcccaggggtgcccacgcgaaattcaaacccccccc
ccccacacacacacatcgccgtgggccgtgcaggatgcaatcgggggtccagacgccacc
cccatgggctatgcgtgggggtccacgcaagatgcaatccctggggggggggggagtgcg
gtggtccacgcaactccccgtggggcgtacgcgatgcaaccggaggtgcacgcaaaaggc
gaccaacccgcgggggggggtccaggtcgcgatgcatcccccaccccccgcggacagtgc
gcgatgcaagcggaggtccacgcacaacgcaaggccccgtgggccatacgcgatgccacc
gtgggtccacgcaaaatgcaaccaacctcttcggggggagtccacagtacgatgcacccc
cccccccccccgctcccccccaccccattgccggaccgcccacgatgcaaccagcgatcc
acgcacaacgcaactccccgcggagcccgcagggtgctgccgtgggcccccccccccccg
cggagcccgcagcaccccgaggaggcagacacgcggggaccacccacccccaccccccac
cccggccccgccccagcccccacctctgccacccactctgtgccctccccacgctga
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