Pogoniulus pusillus (red-fronted tinkerbird): 135190552
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Entry
135190552 CDS
T10504
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135190552 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135190552 (SPATA13)
Membrane trafficking [BR:
ppus04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135190552 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
135190552
NCBI-ProteinID:
XP_064028077
LinkDB
All DBs
Position
3:complement(21297704..21518745)
Genome browser
AA seq
1330 aa
AA seq
DB search
MTYNKAVHSEELSSPGRCESKTNQGASNEGEAASSAVGDSAVALSYPSLHLHAYSIESMT
TFPNGCGNGTTVTCLVMDNKDPQTQTTYVSHNGGYGTSNSHQEEIQEDKLSPSKIMRFFT
TPRKRANSSSDRPRSLVLMGNPSTWNALSSIRKMGSFKKLKSSVFQGIQTRECSDFLNEN
GVGKPSSNGAVTRVQTNRYSYSGPLHDFQNAVDGLASDCSDAEESDESFLRNTHRSRSIR
RAYGAGRINLVDTDKVQSHQNCSRQTSPVITEAKMCEILVKDSENNRIIYRRSKSSDNLN
FLKKSSFKRKSTSNLTDLKVASEKQLPARTVSVTSADSDKTSGNPERRSKRWKSPIRAKD
FDRVLKLVSNVTDAAWRKDGSKTTAPTPSEQSQRTRSNSRLHDDYSRRVSSSTDQDRKRC
ISPVSSPDSSLPGTPCLQSPAVAQDKETEMNVAVAEDKSLRTSSGIPDSDSLSPTLNDIS
PFPNEVFYSDSEEPKATEQFTYEAENPHIPVRPTTPKPQSPTAEKVKCNINFQCPNHHST
LSLSSSESEERAEVPGMKLGKNPVCFQDSVQTVYYDDGNEDSGISSHSQLSLNLASGAEE
KKEEVVSDDHWKRSPSQDEEKADTQKITPRRWGSGRRSRPRPLSDYGQMSIRSLSIPEDS
VAVESQTDCVDGEHQPGLASFAPVIQSNTVGYHRGRKRRPISVIGGVNFYGSGPEEEIEG
LLTQPVARPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTPNVAADGGTE
SSALVDDNGSEEDYSYEELCQTTPRYLQPGGEQLAINELISDGSIVYAEALWDHVTMDDQ
ELAFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPESCNSIQDEEQDA
DISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTTAQLST
IFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSACIE
LSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDY
NNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHSGELTK
ISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMEIVDTEDGRDKDFNINI
KNAFKIINRATEEVHLFCAKKQEDKKRWMEACESERRRVQEDKEMGMEISESQKKQAMQN
ARKSRHGKMKGVSYNGCPVPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPSLFWH
TFNKLTPFKK
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgacttacaacaaggctgtgcattctgaggagcttagctcacctggtcgatgtgaaagc
aagacaaaccaaggtgcatcaaatgaaggggaggcagcgagctcagctgttggagatagt
gctgttgctttgagctaccccagcctccatctccatgcatacagcatcgagagcatgaca
acgtttccaaatggctgtggaaacggcaccactgttacttgcctagttatggataacaaa
gatccccaaacccagactacttatgtcagtcataatgggggatacggcaccagcaacagt
caccaggaggaaattcaagaggataaactcagcccttccaaaatcatgcgctttttcacc
accccacggaagcgggctaattccagctctgacaggcctcgttctctggttttgatgggc
aacccatccacgtggaatgctttgtcttccatccgaaaaatgggatctttcaagaagttg
aaatcttcagttttccaaggaattcaaacaagggagtgctcagacttcttaaatgagaat
ggtgtaggcaaacctagttcaaacggggctgtgacacgagtccagactaacaggtattcc
tattcagggcctctgcacgatttccagaatgcagtggatggcttagcttctgactgctcc
gatgcagaggagagtgatgagtctttcctgaggaatactcatcgctcacgcagcattagg
cgggcttatggtgccggccgcataaacttggtagacacggataaagttcagagtcatcag
aactgtagcaggcaaacatcacctgtcatcacagaggccaagatgtgtgaaattttggtg
aaagactctgaaaacaacaggatcatttatcggagaagcaaaagttcagataatttgaat
tttctgaaaaagagctcgttcaaacggaagtccacctcaaacctcactgacctcaaggtt
gcaagtgaaaaacaactaccagcgaggactgtgagtgttacttctgctgactcagacaaa
accagtgggaatcctgagaggagatccaaacgatggaagagccctatcagggcaaaggat
ttcgaccgagttttgaaacttgtcagtaatgttacagatgctgcatggaggaaggatggc
tctaagactacagctcccactcccagtgaacagtcccagagaacaaggtcaaacagcaga
ctgcatgatgactactcccgcagagtttccagcagcacagatcaagacagaaagagatgc
atttcccctgtatctagtccagattcttccttgccgggaacaccttgtctgcaaagccct
gcagttgctcaggataaagagactgaaatgaatgtagccgttgctgaagacaaaagcctc
aggacatcatcaggtatcccagactctgatagcttatcacccacactgaatgacattagt
ccatttcccaatgaagtgttttattcagactcagaggaaccaaaagctactgagcagttt
acatatgaagctgaaaaccctcacattccggtcaggccaactactccaaagcctcaaagt
cccactgcagagaaggtaaagtgcaatattaatttccagtgtccaaaccatcacagcacg
ttgtcgctgagctcttcagagagtgaggagagagctgaggtaccagggatgaagctgggc
aagaatcctgtgtgcttccaggactcggtgcaaactgtgtactatgatgatggaaatgaa
gacagtggcataagcagccactctcaactgagcctcaatttagcctctggtgctgaagag
aaaaaggaagaggttgtttctgatgaccactggaagaggtctccatcccaggatgaagaa
aaggcagacacacagaagatcacacccaggagatggggctctggaagaagatctcgtccc
agacctctctcagactacggtcaaatgtcaattagaagtttatctataccagaagattct
gttgcggtggagtctcagacagactgcgtggatggggaacatcagccagggctggcttcc
ttcgcacctgtgatccaaagcaatacagtaggctaccacagaggacgaaaaagaagaccc
atctctgtaataggtggggtcaatttctatggaagtggtccagaagaagagatagaaggt
ctgctgacacaacctgtagcacggccacctgttccagcacaccaggttcccccttacaaa
gctgtttccgccaggttccgtccgcttaccttttcacaaagtactccgattggcctggac
cgcgttggacgacggcggcagatgagaacacctaatgttgctgcagatggtgggactgaa
tcttcagccttagtggatgataatggtagcgaggaagattacagttacgaggaactctgc
caaaccactcccaggtacctgcagcctggaggggaacagctagcaattaatgagctgata
agcgatggcagcattgtctatgcagaagctctctgggaccatgtgactatggatgatcaa
gagctggccttcaaagctggagatgtcattagagttctagaagcttccaacaaagactgg
tggtggggaagaaatgaggacaaggaagcctggtttccagctagctttgtcaggctgcga
gttaatcaggaggaagtgccagaaagttgtaatagtatccaggatgaagaacaagatgca
gatataagcaagcatcgtcagaaaatagctgaaaacaaggaccagatgagaaccaatgtt
atacaggaaattatgaacacagaacgagtctatatcaagcacctcaaggacatctgtgag
ggttatattcgtcagtgtcgcaaacatacaggaatgttcaccacagctcagctaagcacc
atttttggaaatattgaagacatttacaagttccaaagaaagttcctgaaggatcttgag
aaacagtacaacaaagaggaacctcatctaagcgaaatagggtcatgttttcttcaacat
caagaaggctttgctatttattcagagtattgtaacaatcatcccagtgcctgcattgaa
ctttccaaactaatgaagcagggcaaatatcgtcacttctttgaggcctgtcgcctgctt
cagcagatgattgacattgcaattgatgggtttcttctcacgcccgtgcagaaaatctgc
aagtaccctctgcagctcgcagaattgctcaaatacaccactcaggagcacagtgattac
aacaacataaaagctgcatatgaggctatgaagaatgtagcatgcctgatcaacgagcga
aaacgaagactagaaagcatagacaagattgcacgttggcaagtctctatcgtagactgg
gaggggccggatgtgttagcccgaagctcagaactgatccattcaggagaactgaccaaa
atatcaaagcaaggcaaaagccagcagaggactttcttcctttttgaccatcagcttgtg
ttctgcaagaaggacttactgagaagggacatcttgtattataaggatcgtattgacatg
gatgagatggaaattgtagacactgaagatggcagagacaaagactttaacattaatatc
aagaatgcttttaagataataaacagagcaacagaagaggttcatttgttctgtgcaaaa
aaacaggaggataaaaagagatggatggaggcatgtgaaagtgaaagaagaagagttcag
gaagacaaggagatgggaatggaaatctcagaaagccagaagaaacaagccatgcagaac
gctcgtaagtcaaggcatggaaaaatgaaaggtgtcagctataacgggtgccctgtgcct
cctccacaccaaagcctccatcctattcatcagcgccacatcactgtgcctaccagcatc
ccacagcaacaggtgtttgccttggcagaacccaagaggaagccatcccttttctggcat
accttcaacaaactcaccccctttaagaagtga
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