Pogoniulus pusillus (red-fronted tinkerbird): 135190586
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Entry
135190586 CDS
T10504
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppus03036
]
135190586 (CHD5)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135190586 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
135190586
NCBI-ProteinID:
XP_064028140
LinkDB
All DBs
Position
36:4555892..4583114
Genome browser
AA seq
1957 aa
AA seq
DB search
MRGPAAGRELLDDAENEEDVSEEEDGVLEGLEEFFAEEQVAVQKKKKPKKLKDGKAAKIK
RRKKEGSNDEMSENEEEIEEKSESEGSDYSPNKKKKKKLKEKKEKKPKRKKKDEEEDDNE
DGALKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAIAAAVETVTVAPPLAASPQPPALPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGMPSKRKKGSSSEEEEREESDLDSA
SINSSSVRSECSAGLGKKGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEEGGEEEEDDHMEFCRVCKD
GGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPATP
LPPVPVLPTPTTELALPQPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRN
YQRKNDMDEPPAFDYGSGDEDSQREKRKSKDPQYAQMEERFYRYGIKPEWMMIHRILNHS
FDKKGDIHYLIKWKDLPYDQCTWEMDEIDIPYYENLKLLYWNHRELMLGEDTCPLKKLNK
KGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDT
ILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYT
GDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEW
ACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNL
EGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYK
FILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVK
SSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQE
AIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNK
KVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELF
KDDVEGMVSQGQRLGVPDAVTPFSDTLSAKGGVATPGMKKKHGGTPPGDNKDVEDSSVIH
YDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVD
PDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGS
EDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAI
MRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLS
RQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVLEGPESKKCSEVVSSDPNTPVPASPA
HGHVGPAPLADRTEAQLGFQEERDQVEQKARKVSDSQVPASAEKVESEEQPESCDSKEKP
REERQEESEKAEPSPEPLGKDEGIPEKEKPLEKLELKSSPGKGEDREAKPEEAKAEEKEL
SEAQQNGDKEEEEDGKKDERNGNFRFMFNIADGGFTELHTLWQNEERAATSSGKIYDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPTGPQGSF
GSSQIYNSSFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtccagcggctggccgggagctgctggacgacgcggagaatgaggaggacgtt
tcggaagaagaggatggggtactggaaggacttgaggagttttttgcagaagagcaagtg
gctgtgcagaaaaaaaagaaacccaagaagctgaaagatggcaaagctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagagaatgaagaggagatcgaggag
aagtctgagagtgaagggagtgactactcccccaacaaaaagaagaagaaaaagctgaag
gagaagaaggagaagaagccaaaacggaaaaagaaagatgaagaagaggatgacaatgag
gatggagctctaaaggagcccaagagctcagcccagctgatggaggagtggggccttgat
gatgtggattatgtcttctctgaggaggattaccacaccctgactaactacaaggcgttc
agccagttcctcaggcctctgattgccaagaagaaccccaagattcccatgtccaagatg
atgactgtgcttggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcagcggctgcggcagcagcggccatagcggcagcagtggagacagtcaccgtggccccg
ccgctcgctgccagcccccagccacctgccctgcccactgtcatcaggaaggccaagacc
aaggagggcaagggtccaggcgtgcggaagaaaatcaaaggctccaaagatggaaagaaa
aaggggaaggggaagaagatggcaggcttgaaattccggtttggaggaatgcccagcaaa
aggaaaaagggctcctctagtgaagaggaggaacgggaggaatccgacttggacagtgcc
agcatcaacagctcctcagtgcgctccgagtgctcggctggcctgggcaagaaagggaag
aggaggagaaagaaaaagaggatcgaggaaggggacggctacgagacggaccaccaggac
tactgcgaggtgtgccagcagggtggggagatcatcctgtgcgacacctgcccccgtgcc
taccacctcgtctgcctcgatcctgagctggagaaggcccccgagggcaagtggagctgc
ccgcactgcgagaaggagggcatccaatgggagccaaaagaagaggaggaggaggaggaa
gaggagggtggtgaggaggaggaggacgaccacatggagttctgccgggtgtgcaaggac
ggaggagagctgctgtgctgcgacacctgcccctcctcctaccacctgcactgcttgaac
ccgccgctgccggagatccccaacggggaatggctctgcccccgctgtacctgtcctccc
ttgaagggcaaagtgcagcgcatcctgcactgggcctggaaggagccaccagccacccca
ctcccacccgtgcctgtgctgcccaccccgaccacggagctggctctgccccagcccaag
gtgctggaggggatcccggagcgcgagttctttgtgaagtgggcaggcctctcctactgg
cactgttcctgggtcaaagagctgcagctggagctttaccacacggtgatgtaccgcaac
taccaacgcaagaacgacatggatgagcctccagcctttgactacggctctggggacgag
gacagccagcgggagaagcgcaagagcaaggacccacagtacgcccagatggaggagcgc
ttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctcaaccacagc
tttgataagaaaggagacatccattacctgatcaagtggaaggacctgccctatgaccag
tgcacctgggagatggatgagattgacatcccctactatgagaacctcaagctgctctac
tggaaccacagggagctgatgctgggggaggacacatgtcctctgaagaagctgaacaag
aaagggaagaagctgaaagaggagaagctggaaaagcctccggagacacctcttgtggat
cctacggtgaagtttgacaagcagccatggtacattgatgccacgggtggcactctgcac
ccctaccagctggaaggactgaactggctgaggttctcctgggcacaagggacagacaca
atcctggctgatgagatggggctgggcaagactgtgcagaccattgtgttcctctactct
ctgtacaaagagggccactcgaaagggccgtatctggtcagtgctcctctctccaccatc
atcaactgggagcgtgagtttgagatgtgggcacctgacttctatgtggtcacctacacg
ggggacaaggagagccgctcggtcatccgggagaacgagttctccttcgaggacaacgcc
atccgcagcggcaagaaggtcttcaggatgaagaaggaagctcagatcaagttccatgtc
ctgctcacctcctatgagctgatcaccattgaccaggcggtgctgggctccatcgagtgg
gcctgcttggtggtggatgaagcacacaggctgaagaacaaccagtctaaattctttagg
gtattaaacagctacaagattgactacaagctgctgctcactgggaccccactccagaac
aacctggaggagcttttccacctgctcaacttcctgactcctgagaggtttaataacctg
gagggcttcctggaggagtttgcagacatctccaaggaggaccagatcaaaaagctccat
gatctgctgggtccccacatgctgcggcgactcaaggcagatgtcttcaagaacatgcca
gccaagacagagctgattgtgagagtggagttgagccagatgcagaagaagtactacaag
ttcatcctgacacgcaactttgaagccctgaattccaaaggtggtgggaaccaggtgtcc
ctgctgaacatcatgatggacctgaagaagtgctgcaaccacccctacctcttccctgtg
gcagcggtggaggctccagttctccccaatgggtcctatgatgggaattctctggtcaaa
tcttctgggaagctgatgctgctccaaaagatgctgaagaagttacgggatgggggtcac
agagttctgatcttctcccagatgacgaagatgctggacttgctggaagatttcctggag
tatgaaggctacaagtacgagcggatcgacggcggcatcaccggcggcctgcgccaggag
gccatagacaggtttaatgctcctggtgctcagcagttctgcttcctcctctccacccgt
gctggtggcctgggcatcaacctcgctacggccgacacggtcatcatctatgactccgac
tggaacccccacaatgacatccaggcattcagccgagctcaccgcatcgggcagaacaag
aaggtgatgatctaccgcttcgtgaccagagcctccgtggaggagcgcatcacacaggtg
gccaagaggaagatgatgctcacgcacctggtggtgcgcccagggctgggctccaagtca
ggctccatgaccaagcaggagctggatgacatcctcaaatttggaacagaagagctcttc
aaggatgatgtggagggcatggtgtcgcagggacagcggttgggcgtgccagacgctgtc
acccctttctctgacaccctgtcagccaaagggggtgtggcaactcctggcatgaagaag
aagcacggtggcaccccgccaggtgacaacaaggacgtggaggacagcagtgtgatccac
tatgacgatgctgccatctcaaagcttctggaccgcaaccaggacgcgactgacgacaca
gagctgcagaacatgaacgagtatctcagctcctttaaagtggcccagtatgttgtgaga
gaagaggacggtgtggaggaagtagagcgtgagatcatcaagcaggaggagaatgtggac
cccgactactgggagaagctgctgcggcaccactacgagcagcagcaggaagacctggcc
aggaacctggggaaggggaagagaatccgcaagcaggtgaactacaacgacacctcgcag
gaggaccaagagtggcaggatgagctctctgacaatcagtcagagtactccattggctcc
gaggatgaggatgaagactttgaggagaggccagaaggtcagagtggcaggagacaatcc
cggcggcagctgaagagcgaccgggacaagcctctgcctcctctgctggcaagagttggg
gggaacatcgaggtgctgggcttcaacgcgcggcagcgcaaagccttcctgaacgccatc
atgcgctgggggatgcctccccaggacgccttcaactcccactggctggtccgagacctg
cgagggaagagcgagaaggagttcagggcttacgtctcgctcttcatgaggcacctgtgc
gagcccggggcggacggcgctgagaccttcgcagacggcgtcccccgcgaggggctgtcg
cgccagcacgtcctgacccgcatcggggtcatgtcgctcgtcaggaagaaggtccaggag
tttgagcacgtcaacgggaagtacagcaccccagatctggtccttgagggcccggagagc
aagaagtgcagtgaggtggtgtcttcagaccccaacacccccgtcccagccagcccagcc
cacgggcacgtgggacctgcacccctggcagacagaacagaggcgcagttggggttccag
gaagagagggaccaagtggagcagaaagccaggaaggtgtctgacagccaggtgcctgca
agtgctgagaaggtggagagtgaagagcaaccagaaagctgtgacagcaaggagaagccg
agggaagagaggcaagaggagagtgaaaaagctgagccctctcctgagcccctggggaaa
gatgagggcattccagagaaagagaagcctttagagaagctggagttgaaaagcagccca
ggcaaaggggaggacagagaagccaaaccagaggaggccaaggcggaggagaaggagctg
agtgaggctcagcaaaacggtgacaaagaggaggaggaggatggaaagaaggatgagaga
aacggcaacttccgcttcatgttcaacatcgccgatggcggcttcacagagctgcacacg
ctgtggcagaacgaggagcgggcagccacctcctccggcaagatctatgacatctggcac
cgccgacacgactactggctgctggcagggattgtcacccacggctatgcccgctggcag
gacatccagaatgacccacgctatgtcatcctgaacgagcccttcaagtcggagatacac
aaggggaactacctcgagatgaagaacaagttcctcgcccggcggttcaagttgctggag
caggccctggtgatcgaggagcagctgcggagggctgcgtacctcaacatgacgcaagac
cccagccacccggccatggccctgaacgcgcggctggcggaggtcgagtgcctcgccgag
agccaccagcacctctccaaagagtccctggctggcaacaagcctgccaacgccgtcctg
cacaaggtgctgaaccagctggaggagctgctgagcgacatgaaggccgacgtgacgcgg
ctgccctccatgctgtcgcgcatcccgcccgtggccgcccgcctgcagatgtccgagcgc
agcatcctcagccgcctggccacgcgcggcggggaccccaccgggccccagggctccttc
ggttcctctcagatctacaacagcagcttcgggccgaatttccgcggtcccgggccgggt
gggatcgtcaactacagccagatgcctctgggaccatacgtgactgatatttag
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integrated database retrieval system
