Pogoniulus pusillus (red-fronted tinkerbird): 135190588
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Entry
135190588 CDS
T10504
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppus03037
]
135190588 (NPHP4)
Cilium and associated proteins [BR:
ppus03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
135190588 (NPHP4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASH
DUF2685
Motif
Other DBs
NCBI-GeneID:
135190588
NCBI-ProteinID:
XP_064028144
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All DBs
Position
36:4603799..4623720
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AA seq
1378 aa
AA seq
DB search
MSEWRKVFRQSLAVPPHCQRRRARWAGSTAFCCVLKYLEGAVLAQGAEYQLRLSLFDATY
HHFFGRTWRSSWRAARATTPRPARAAFNETVYFHTSLNHPGITVVVELVTVAGKGDEGSQ
HLSCGFGLIPLFSSRSEMTDLATEDRALKLYHGTPRALLHPRFQDPMEKNKYLMVMEKSH
LQYALKTHQPLEMVFHLLPENLLVSGLQTLPGLQPARGDTGDCLQKPRLLKPVSCYLEGL
SVQLTPSLEEFEEELLELLNSDRLLQANAAPDGAGLVVRERRLHVGVHNGLRFLQPPQVA
LLVPQAEAAQGTCPGVPSSGARGVGQALVLRSRIHLSEMVPHPAVKVCFQLEYLCCSSGA
AGGKALPGSARGEVRDLCSVCWAVWSPVLGTSRAEVVLPLHGGAHRGPCQTLVYRNPVSS
RSSRQLQEQQVESGTVQFCFATDSEEHPVTAAELLRSAGDEPAPTPALSLAAPLETMTSP
RGPGLSVSELSASPRGKDGFLVPGSSQHDAGITHLEASLGSPDPEPSASDHLRALPFAPL
HVPIAAVGLQAGRSHTLPSRAALARLHAAGFPQILDRHRLPVEISEPPEPASISLRLEES
DPLQGDEIILQFLAFGRDTRDGTEEPWPGTIFLTFQFYRFPPVTTARLQLVSAEPGAAQL
LVRLNKDGTLSTGPPGLQLRYVVDPASLRPGERRWFVRYLAEHSLQIDVWDGDSLLLVGS
AAVRLQPLLRQGREAVRTHHELEVTTTEYEPDVAVLGQEALRHGALRPLGVRVLVRGHLH
LCLANVGHPCEETPGQLPSPLPSHSHHVPGSGSATNISAGSWLPLNVAGGGQVSRARRLV
EVDSELAAALHSRQAEAQLPPPAAPGEAMAARQRKLRRMALVRQQEDASSGRMPQLSEQR
ARHLKDLQIIDAYRDHTKGENIARVLSQAITATHTVHAVLGTAEFFEFALKNPCGVQHTV
TIEVDQPELSVILDPREWRHFKELTRSATPVEEEMFHLRQDLKPQVYLRPNETLRIPFKY
QTFSADPALAAAQGPAGMDADANVATLGKSEGRQTKHIQVCFQGSGGRPLALLRVKVEPQ
PHVVDQTFRFYHPELTFLKKTIRLPPWHTLPGAPVGMPGGQPQMFVRCSDPNIICETKNM
GPGEPQDIFLKVAGGPSPQIKKFFVAIYMDAWLAVPTQIWQFYLHSLQRLDLSGTAGQLA
RLSLLLRGTAAPRRVQAFTSHPQELQVDPGGAFLLPANAVQELHLGVRPRRAGSRFLYLN
LVDVESHQLVSSWLLCLSCRQPLISKVFEISLPVGGSCTKRITYTNPYPSPRLYFLGTNR
PDLLQFKEDSFQVAAGEVYSIGLRFAPSQEVGEEEILIHINDHEDKNEESFCVRVLYQ
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtggcggaaggtgttccggcagagcctcgccgttcctccgcactgccagcgc
aggcgggctcgctgggctggctccactgccttctgctgcgtgctgaagtacctggaagga
gctgtcctcgctcagggagcagagtaccagctgcgcctctccctttttgatgccacttac
caccacttctttgggaggacgtggaggagcagctggcgagctgcccgtgccaccacaccg
cgcccagccagggcagctttcaatgagactgtctacttccatacctccttgaaccaccct
ggcatcactgttgttgtggaactggtgacagtggctggaaaaggggatgagggctctcag
catctctcctgtggctttggactcatccccctcttcagcagcaggtcggagatgacagac
ttggccactgaggacagagcgctgaagctgtaccatgggaccccacgtgccttgctgcac
ccacgtttccaggaccccatggagaagaacaaatacttgatggtgatggagaaaagccac
ctgcagtatgccctgaagacccatcagcccctggagatggtgttccacctccttcctgaa
aatctgctggtgtctggcctgcagaccctgcctggcttgcagccagcacgtggggacaca
ggtgactgcttgcagaaaccacggctgctgaagccagtctcctgctatctggaggggctg
tctgtgcagctgaccccctctctggaggagtttgaggaggagctgctggagctgctgaac
agtgaccgcttactgcaggccaacgccgcgccggacggtgccgggttggtggtgcgggag
cggcggctgcatgttggtgtccacaacggcctgcgcttcctgcagccgccacaggtcgcc
ctgctggtgccccaggcagaggcggcacagggcacctgcccgggggtgcccagctctgga
gccaggggtgtgggccaagccctggtcctgaggagccgcatccacctgagtgagatggtt
ccacacccggctgtcaaggtctgcttccagctggagtacctctgctgcagctcaggagca
gctggtgggaaggccctgcctggcagtgcccgtggtgaggtgcgtgacctgtgctcggtg
tgctgggctgtctggagcccagtgttgggcaccagccgggctgaagtggtcctgcccctg
catggtggtgcccaccgtggaccctgccaaaccttggtctaccggaacccagtgagcagc
agaagctcccgacagctccaggagcagcaggtggagtctgggactgtccaattctgcttt
gccaccgactcggaggaacatcctgtgactgccgccgagctgctgcgcagcgccggggac
gagccggcgcccacgccggcgctgagcctggcagctcctctagaaacgatgacctcccca
cggggaccagggctgtcagtgtctgagctctcagcctcaccacggggcaaggatggattc
ctggtgccaggcagctcacagcatgatgcagggatcactcacctggaggccagccttggc
tcaccggacccagagcccagtgccagcgaccacctgcgggcgctgccatttgcccctctg
catgtgcccattgctgctgtggggctgcaggcaggcaggtcccacacgctgccgtcccgt
gccgccctggcacgcctgcacgccgctggcttcccgcagatcctggaccgccatcggctg
ccggtggagatctcagagccgcctgagccagcgagcatcagcctgcggctggaggagtct
gaccctctgcaaggcgacgaaatcatcctgcagttcctggcctttggcagggacacccgg
gatggcacagaggagccgtggccaggcaccatattcctcaccttccagttctaccgtttc
ccaccggtcaccacggctcggctgcagctggtcagcgccgagccgggggcggcgcagctg
ctggtgcggctgaacaaggacgggaccctcagcaccgggccgccagggctgcagctgcgc
tatgtggtggatccggcgtccctgcggcccggcgagcggcgctggtttgtgcggtacctg
gctgagcacagcctccagatcgacgtctgggacggagactccctcctcctggttgggtct
gctgctgttagactgcagcccctgctgcgccagggccgggaagctgtcaggacccaccat
gagttggaggtgaccacaactgagtacgagccagatgtggcggtgctgggccaagaggct
ctgcggcatggagccctgcggccccttggtgtccgtgtgctggtcaggggccacctccac
ctctgcttagccaatgttggccacccatgtgaggagaccccagggcagctgccatcccca
ttgccatcccactcccaccacgtgcctggatcgggcagtgccaccaacatctcagctggc
agctggttacccctgaacgttgccggtggtggacaagtgtcacgggcacggaggctggtg
gaggtggacagtgagctggcagctgccctgcacagccgccaggcagaggcacagctgcca
cccccagctgctcctggcgaggctatggctgctcgccagcgcaagctgcggcgcatggcg
ctggtgcggcagcaggaggatgccagcagtgggaggatgccccagctctcggagcagcgt
gcccgacacttgaaggacctgcagatcattgatgcctaccgggaccacaccaagggtgag
aacattgcccgggtgctgagccaggccatcactgccacccacaccgtgcatgcagtgctg
ggcacggcagagttctttgagtttgccctgaagaacccctgtggtgtccagcacactgtg
accattgaagtcgaccagcctgagctcagcgtcatactggacccgagggagtggcgccac
ttcaaggagctgaccaggagtgccacaccggtggaggaggagatgttccacctgcgccaa
gacctcaagcctcaggtctacctgcgccccaacgagaccctgcgcatccccttcaagtac
cagaccttctctgcagaccctgcgcttgctgccgcacaggggccagctgggatggatgct
gatgctaacgttgccaccctggggaagagcgagggcaggcagacaaagcacatccaggtc
tgcttccagggcagtggggggaggcctctagccctgctgcgtgtgaaggtggagccgcag
ccccacgtggtggaccagaccttccgtttctaccaccctgagctcaccttcctgaagaag
accattcggctgccaccctggcacaccctccctggggcgccagtggggatgccaggaggg
cagcctcagatgtttgttcgctgcagtgaccccaacatcatttgtgaaactaagaacatg
gggccgggggagccgcaggacatcttcttaaaagtggctggagggccaagcccacagatc
aagaagttctttgttgctatttatatggacgcctggctggcagtgcccacgcagatctgg
cagttctacctgcactccctgcagcgcctggacctgagtggcacagctgggcagcttgcc
cgcctctcgctgctgctgcgtggcaccgctgccccacgcagggtgcaggcattcacctcc
cacccacaggagctgcaggtggaccccggcggtgcctttctcctccctgccaacgccgtg
caggagctgcacctgggtgtgcggccccggcgtgctggcagcaggttcctctacctcaac
ctggtggatgtggagtctcaccagctggtgtcctcctggctgctctgcctctcctgcagg
cagcctctcatctccaaggtgtttgagatctctctgcccgtgggtggcagctgcaccaag
cgcatcacctacaccaacccctacccctcgccccggctctacttcctgggcaccaaccgg
cctgacctcctccagttcaaggaggactccttccaggtggccgcaggggaggtgtacagc
atcggcctgcgcttcgcccctagccaggaggtgggcgaggaggagatcctgatccacatc
aatgaccatgaggacaagaacgaggagagcttctgtgtcagggtcctctaccagtga
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