Pogoniulus pusillus (red-fronted tinkerbird): 135190765
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Entry
135190765 CDS
T10504
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135190765 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
135190765 (PAN3)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135190765
NCBI-ProteinID:
XP_064028560
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Position
3:23085396..23171326
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AA seq
905 aa
AA seq
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MNSSGLPCSSPSPVVGPPPPAAGVGVVGAGAGCGGGAVKLKFCRYYAKDKTCFYGEECQF
LHEEPGAASAGPGPAAPLGGLPLGIPPAAAAAAAGPGYPPHGASPGPAAAAVVGPKKAEV
GSGGGGGGGGGGGLDGPRLAIPGIDGGGLADASLTDSYFSTSFIGVNGFGNPAETKYPMM
QRMTNSSSSPSLLNDSAKQYAGHDPLSSPNSSLFNDFAALSVSQRRKLAKPAFPSFITDL
EDRYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENN
LQTPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGS
SPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVGGT
TYFYTDTTPAPVTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLITM
AQIDQADVPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLR
RIHGFRLANTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSR
HFNDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVM
DPTKILVTGKTRLRVNCVGVFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSL
SGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQM
RNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQV
TEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAA
ANGQL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagcggcctgccctgctcgtcgccgtcgccggtggtggggccgccgccgccg
gcggcgggggtcggcgtcgtgggggcgggggccggctgtggcggcggcgccgtgaagctg
aagttctgccgttactacgccaaggacaagacctgcttctacggcgaggagtgccagttc
ctgcatgaggagcccggcgccgcctctgccggcccggggcccgccgcccccctcggcggg
ctcccgctcggtatccctccggctgccgccgccgccgccgctgggcctggctacccgccg
cacggggccagcccgggcccggcggcggcggcggtggtggggcctaagaaagccgaggtg
gggtcgggaggcggcggcggaggcggcggcggcggggggctggatggcccgcggctggcg
attcccggaatagatggcggtgggttagctgatgctagtctcacagattcctactttagt
accagcttcattggcgttaatggatttggaaatcccgctgaaacaaagtatcccatgatg
cagaggatgacaaatagcagcagctctcctagccttctcaatgacagtgccaagcagtat
gcaggccatgatccactatcttcaccaaattcatccttatttaatgactttgctgccctc
agtgtgtctcagaggaggaagctggcaaaaccagcatttccttcgtttatcactgacttg
gaggacagatacaatacagtcttgcccaggaagtatcgactggggatgctggatgagagg
atagttccggttggatcaaaagcaagaaaatcaaagaaccctattggctgtctggctgac
aggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaat
ttacagacaccaaatccttctgcaagtgagtttattcctaaaggaggatcaacctccagg
ctgagtaatgtatcccagtcaagtatgtctgccttctctcaagccttgttctctcacccc
tccatgggaagtcctgctactgctgggttagcaccaggaatgtcactgtcagcaggatct
tctcctcttcattcccccaaaataactcctcatacatctcctgctcctcgaagaagaagt
cacactcctaacccagcaaactatatggtgcctactagtgcctctgcttctgttgctaac
gctgtctctcagcctccatctactggccaggtgatccagaaggaaacagtgggtggaaca
acatacttctacactgataccactccagcgcctgtcacaggaatggtatttccaaactac
cacatttaccatccagctgcacctcatgttgcttatatgcagcctaaagcaaatgcacct
tccttcttcatggcagatgagctcagacaggaactgatcaacagacacttaataactatg
gcccagattgatcaggctgatgttcctgcagttcctgcagaagtggacagctaccacagt
ctctttcctttggaaccactgccaccacccaatcggatacagaaaacaagcaactttggc
tatattacatcatgctataaagctgtaaatagtaaagatgacctgccctactgccttcgg
aggatacatggttttcgtcttgctaacaccaagtgcatggtactggttgacatgtggaaa
aaaattcagcactcaaatatagtaactttgcgtgaagtgtttactactaaagcatttgga
gaacattctcttgtgtttgcatatgattttcatgctggaggtgagactatgatgagcaga
cacttcaatgaccctagtgctgatgcttatttcacaaaacgaaaatggggtcagcatgat
ggacctctaccacggcagcatgctggtttgcttccagagtctttgatatgggcatatata
gtgcagctcagctctgcgttgcggaccattcatacggcaggactggcatgtcgagttatg
gacccaacaaagattctcgtaaccggcaaaacaaggttacgagttaattgtgttggagtc
tttgacgttttgacatttgacaacagtcaaaataatccactggcattaatggctcagttt
cagcaagcagatctgatctccctggggaaagttgtgttggctttggcttgcaattcttta
tcaggaattcagagagagaatttgcaaaaagcaatggaactggtgacaatcaactattcc
tctgatctgaagaatctgattttgtatttgctgaccgaccaaaacaggcttcgcagtgtg
aatgatatcatgccaatgatcggtgcacgattctatactcagttggatgctgctcagatg
cgaaatgatgttatagaggaagaccttgcaaaagaggtgcaaaacggaagattgtttagg
cttctagcaaaactgggaacaatcaatgagaggccagagtttcagaaggacccaacgtgg
tcagaaacaggagacaggtatttactaaagctctttcgagatcaccttttccatcaggtg
acagaagcgggtactccttggattgacctcagtcacattatctcatgtcttaacaagtta
gatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgtacttgtg
gtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactgattgcagcc
gcaaatggtcagttgtag
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