Pogoniulus pusillus (red-fronted tinkerbird): 135190888
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Entry
135190888 CDS
T10504
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135190888 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppus03000
]
135190888 (ARID1A)
03021 Transcription machinery [BR:
ppus03021
]
135190888 (ARID1A)
03036 Chromosome and associated proteins [BR:
ppus03036
]
135190888 (ARID1A)
Transcription factors [BR:
ppus03000
]
Eukaryotic type
Helix-turn-helix
ARID
135190888 (ARID1A)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135190888 (ARID1A)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135190888 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
135190888
NCBI-ProteinID:
XP_064028716
LinkDB
All DBs
Position
37:complement(721183..779895)
Genome browser
AA seq
2282 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPSELKKAEAQQRDCPPEEAGGEAAAERGGGEKQAESEGPTGKE
LQDGAESNGGGAGAESDLKNSNGNPGPRPAAAAATLNNNLPEPPGGGGGSSDGVGAPQQQ
QPPQQPPPSHPAALPPPAYGFGQPYGRGAQAAAAAAAAAAAAAAFHQHGGQQSPGMAALQ
SGGLEQSYPGPAGAPAGPPPPQNSHGGAEHGFPNHQYNSYYAAGAGRSAGSYPPPPQAYA
LSSPRGSAQSSAPTATGTKSPAAAAVAFQQQRFGVMGPSAAGGAGGGGATPQPTATPTLN
QLLTSPSSARGYQGYPGGDYSGGPQDGGAAAKGPAAAEMVSQYGGGNSQGWAAASGGAPP
RSHHAPMSPGSSGGAGAGQSLGRSQQPSSPMDQMGKMRPQPYGGSNPYTQQQGPQAGPQQ
GHGYPGQPYGPQTPQRYPMGMQSRTQSTMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQ
QSPHPQQQPPYSQQPPSQTSHSQPSYQQQQQPQSQAPQLQTSQPAYSQQQSQPAHQQSPT
PYPQQQSAAQQHPQSQAPYSQPQAQSPYQQQQPPQAAPSALSQQPSSYPPAQPQQPQAAY
SQQRFPPPQELSQDSFGSQASSAPSMASSKGQEEMNLNLQSRPSSLPDLSGSIDDLPMGT
EGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGP
LSPAAVPGNQMPPRPPSGQSDTIMHPAMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSP
RQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMN
PMGAGSQMHGQTGVPPYSGLPPGRMTHATMGNRPYGPNMANMPPQVGTGMCPPPGGMNRK
AQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGG
NMANNSAGMAASPEMMGLGDVKLTPAAKMNNKADGTPKAESKSKKSSSSTTTNEKITKLY
ELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKK
WRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQP
PSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFAD
GSDPAFQKRNSMTPNPGYQPSMNASDMMGRMSYEPGKDPYGSMRKAPGSDPFMSSGQGPN
SAMGDPYNRAAGPGMANMAMGQRQHYSYGGPYDRVRTEPGMGPEGNLTAGTPQPNLLPST
PESGMYSPSRYPQQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMD
GSYGPPAKRHEGELYSVPYSAGQGQAPQPLPAAQSQQPSAQPSAQPAPQQDLYNQYGSGY
PPAERRAAAAPQNQFPFQFGRDRVSAPPGSGAQQSLPPQMMGGPMQPAPEGPQQGTMWQG
RGEMGYSYPNRQGAGAAPQGPAYHGVTRTEEILHSDQRVNHEGPWPSHGNRQPPYGPSAP
VPPMTRPPQSNYQPPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPV
PASHITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNSIVTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPG
QRTLLDPERFCKSSASSHEEGEEEDEPRSLNCEEDEEDEEEEEAAFSSKDKVPLESSEEK
LVSKFDKLPVKVVQKNDPFVVDYSAKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKAE
LPGTHKRPPCASAARKCSAAESSPGTKEGEAPASDSSSEKRITATMDDMLSARPGALAGE
EEEVKPLEAAKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCIC
VSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSC
NKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPF
PTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTLVRFLSDRKNPVC
REMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQSPPF
ESTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLVG
QS
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggtcgcccccgccgccgccagcagcctgggcgccccggctccatccgag
ctgaagaaagcggaggcgcagcagcgggattgtcccccggaggaggcggggggtgaggcg
gcggcggagcgcggcggcggcgagaagcaggcggagagcgagggccccacggggaaggag
ctgcaggacggggccgagagcaacggagggggcgcaggggccgagtccgacctgaagaac
tcgaacgggaacccgggccccaggcccgccgctgccgccgccaccctgaacaataacctc
ccggagccgcccggtggcggcggcggcagcagcgacggggtgggggcgccgcagcagcag
cagccgccgcagcagcctcccccttcccacccggccgccttgcccccgccagcctacggc
ttcgggcagccctacggccggggcgcccaggctgccgccgccgccgctgctgcggccgcc
gccgccgctgccttccaccaacatggcggacaacaaagccctggcatggcagcgctgcag
agcgggggcctggagcagtcctacccggggccggcgggagcccccgcggggccgccccct
ccccagaactcgcacggcggcgccgagcacggcttccccaaccaccagtacaactcctac
tatgcggccggggccggacgcagcgccggttcctacccgcctcccccccaggcctacgcc
ctgagctccccccggggcagcgcgcagagctccgctccgacggccaccggcaccaagtct
cccgcagccgccgccgtcgccttccagcagcagcgctttggggtcatggggccctcggcc
gccggcggtgcaggaggagggggagccaccccgcagcccacggccacccccaccctcaac
cagctcctcacctcccccagctccgcccgcggctaccaggggtaccccgggggcgactat
agcggcgggccgcaggacgggggagccgccgccaagggcccggccgcagcggagatggtc
tcgcagtacggcgggggcaacagtcagggctgggccgcggcgtccggcggggccccgccg
aggagccaccacgcacccatgagccccgggagcagcggcggcgccggagcgggacagagc
ctcggccggagccagcagccttcaagcccgatggatcagatggggaagatgagacctcag
ccctacggaggaagcaacccctacactcaacaacagggacctcaggcagggccccagcaa
ggacatggctatccaggacagccatatgggccacagactcctcagagatatcccatggga
atgcaaagcaggacgcaaagtacaatgggcagcatctcatatgcacaacagattcctcct
tatggacagcagggccccagtgcatatgggcagcagagtcagactccatactacaaccag
cagagccctcacccccagcagcagcctccatactctcagcagcctccatcccagaccagt
cactctcagccttcgtatcagcagcagcagcagcctcagtctcaagctccgcagctccag
acctcacagcctgcctactcgcagcagcagtcccagccagcccatcagcagtccccaact
ccctaccctcagcagcagtccgcagcgcagcagcaccctcagagccaggccccctactcg
cagccgcaggcgcagtcgccctaccagcagcagcagccgccgcaggcagctccctcggcg
ctctcccagcagccttcctcctaccccccggcgcagccgcagcagccgcaggctgcctac
tcccagcagcgcttcccccctcctcaggagttatctcaagactcgtttgggtcccaggca
tcctctgctccctcaatggcttccagtaaagggcaagaagagatgaacttgaaccttcag
tccagaccttcgagcctgccggacctgtctggttcaatagatgatctgcccatgggtaca
gaaggagccctgagtcctggagtaagcacatcagggatttccagcagtcaaggagagcag
agtaacccagctcagtctcctttctctccacatacctctcctcacctgccaggcatcaga
ggaccctccccatccccagttggatctccagctagtgttgctcagtcccgctctggtcca
ctttcacctgctgcagtaccaggcaatcagatgccgccccgaccgcccagcggccagtcg
gacactatcatgcatcctgccatgaaccagtcaagcatagctcaagaccgaggttacatg
cagaggaatcctcagatgccccagtacagctcaccccagcctggctcagccttatctcct
cgtcagtcttctggaggccagatgcacgctggcatggggccctaccagcagaactccatg
gggagctatggaccccagggtgggcagtatggacctcaaggaggttatcccaggcagcca
aactacaatgctatgtccaatgccaactaccccagcccggggatgggaggaagcatgaac
cccatgggagcagggagccagatgcatgggcagactggtgtgccaccctacagtgggctt
cctccagggaggatgacccatgccaccatggggaacagaccttacggacctaacatggca
aatatgccacctcaggtggggacagggatgtgccccccgcccgggggcatgaaccgcaaa
gcacaagaggcagctgccgctgccatgcacgctgctgccaactccatccagaacaggcct
cctggttatcccaacatgaatcaagggggaatgatgggcactggacccccttatggccag
ggaatcaacagcatggctgggatgataaacccccagggcccaccctacccaatgggcggg
aacatggccaataactctgcagggatggcagcaagccctgagatgatggggctgggggat
gtcaaactgacacctgcagctaaaatgaacaacaaggcagatgggacaccaaaggctgaa
tccaagtcaaagaagtccagttcctccactacaaccaatgagaagatcaccaaactctat
gagctgggaggtgagcccgagaggaagatgtgggtggatcggtacttggccttcaccgag
gagaaggccatgggcatgaccaacctgccggcggtgggcaggaagcccctggacctttac
aggctctacatctcagtgaaggagattggaggattgactcaggtcaataaaaacaagaag
tggcgcgagctggccaccaacctgaacgtgggcacgtccagcagcgccgccagctcgctg
aagaagcagtacatccagtgtctgtacgccttcgagtgcaagatcgagcgcggcgaggac
cccccgcccgacatctttgcagctgctgactccaagaagtctcagactaagattcagcct
ccctctccagcgggttcaggctccatgcagggccctcagacacctcagtccaccagcagc
tccatggcagaaggaggagacttgaagccaccaaccccagcatctacgccacacagtcag
atgccccctttgccaggcatcaggagtaactcggtgggccttcaggatgcctttgcagat
ggaagcgatcctgcgttccagaagcggaactccatgactcccaacccggggtaccagccc
agcatgaatgcctctgacatgatggggcgcatgtcctacgagccaggcaaggacccctac
ggcagcatgcggaaagctccgggaagcgaccccttcatgtcctcagggcagggccccaac
agtgctatgggtgacccttacaatcgtgctgcaggcccagggatggctaacatggccatg
ggacagcggcaacactactcctacggaggtccttacgacagagtgaggacagagcctggt
atgggacctgagggcaacttaactgccggcactccgcagccaaacctcctgccttccacc
ccggagtcggggatgtactctcccagccgctacccgcagcagcagcagcagcagcagcaa
agacatgattcctatggcaatcaattctccactcaaggcacgtcctcgggcagccccttc
cccagccagcaaactaccatgtaccaacagcagcagcagaactacaagcggcccatggac
ggcagctacggaccccccgccaagcggcacgagggggagctctacagcgtcccctacagc
gcggggcaggggcaggcgccgcagccgctgcccgcagcgcagagccagcagccgagcgcg
cagccgagcgcgcagccggcgccgcagcaggacctgtacaaccagtacggcagcggctac
ccccccgccgagcgccgcgccgccgccgcgccccagaaccagttccccttccagttcggc
agggacagggtctcggccccgccgggctccggcgcccagcagagcctcccgccgcagatg
atggggggccccatgcagcccgccccggagggcccgcagcagggcaccatgtggcagggc
cgcggcgagatgggctacagctacccgaaccggcagggcgccggcgccgcgccccagggg
cctgcgtaccacggagtgactcggacggaggaaatcctgcactcggaccagagggtcaac
cacgaggggccgtggccttcccacggcaaccggcagcctccctacggtccctctgccccc
gtgcccccgatgacgaggccccctcagtctaactaccagcccccccccagcatgcagaat
cacattcctcaggtatccagcccagcacctctgcccagacctctggagaaccgcacttct
cccagcaagtctcccttcctgcactcggggatgaagatgcagaaggcagggccaccagtg
cctgcctcccacatcacaccagcagctgtccagccccccatgatccggcgagacatcacc
ttcccgccgggctccgtggaggccacacaacctgtgctgaagcagaggaggaggctgaca
gcaaaagacattggaactcctgaagcctggagagtgatgatgtctctgaagtctgggctg
ctggctgaaagcacgtgggccttagataccataaacatcctgctctacgatgacaacagc
atcgtgaccttcaacctcagccagctcccaggtttgttggagctcttggtggagtatttc
cggcgctgcctgatcgagatctttggaatcctgaaggaatatgaagtgggagacccaggg
caaagaacactattagaccccgaaaggttctgcaaatcttcagcttcctctcacgaagaa
ggggaggaggaggatgaaccacggagcctgaactgtgaggaggatgaggaggacgaggaa
gaggaggaggctgcattctcaagcaaggacaaagtacccctggagagcagcgaggagaag
ctggtgagcaaattcgacaagctgccggtgaaggtggtgcagaagaacgaccccttcgtg
gtggactactcggccaagctggggcgcgtgcaggagttcgagagcgggctgctgcactgg
cgcatcggcggcggcgacaccaccgagcacatccagacacacttcgagagcaaggcggag
ctgcctggcacccacaagcggcctccctgcgcctccgccgccaggaagtgctcagcagcc
gagagcagccccggcacgaaggagggagaggctcctgcgtccgacagctcctcggagaag
agaatcactgccaccatggacgacatgctgtcggcgcgccccggcgccctggcgggcgag
gaggaggaggtcaaacctttggaagcggcaaaggagagcagcaagtttccctttggcatc
agcccggctcagagccacagaaacatcaaaatcctggaggatgagcctcacagtaaggac
gagactcccctctgcaccctcctggactggcaggactccctggccaagcgctgcatctgc
gtctccaacatcatcaggagtttgtcgtttgtgccgggcaatgactttgagatgtccaaa
caccctgggctgctgctgatcctgggcaagctgatcctcctgcaccacaagcatccagaa
cgcaaacaggcgcccctgacctacgagaaggaggaggagcaggaccaaggggtgagctgc
aacaaggtggagtggtggtgggactgcctggagatgctgcgcgagaacacgctggtcacg
ttggccaacatctccgggcagctggacctctccccttacccggagagcatctgcttgccc
atcctggatggactgctccactgggcagtgtgtccctcagcagaggcccaggaccccttc
ccaacgctggggcccaacgcggtcctgtccccccagagactggttttggaaacactcagc
aaactcagcatccaggacaacaacgtggacctgatcctggccacgccaccgttcagccgc
ctggagaagctgtacagcaccctggtgcggttcctcagtgacagaaagaaccccgtgtgc
cgggagatggccgtggtgctgctggccaacttggcacagggggacagcctggcggccaga
gccatcgccgtgcagaagggcagcatcggcaacctgctgggcttcttggaggacagcctg
gcggccacgcagttccagcagagccaggccgggctgatgcacatgcagagccctcccttc
gagtcgaccagcgtggacatgatgcgcagagccgcccgggccctgctggccctggccaag
gtggacgagaaccactcggagttcaccttgtacgagtcgcggctgttggacatctcggtg
tcgcccctgatgaactccttggtttcacaagtgatctgtgacgtactgttcttggttggc
cagtcatga
DBGET
integrated database retrieval system
