Pogoniulus pusillus (red-fronted tinkerbird): 135191223
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Entry
135191223 CDS
T10504
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135191223 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135191223 (EXOSC8)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135191223 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Modigliani
Motif
Other DBs
NCBI-GeneID:
135191223
NCBI-ProteinID:
XP_064029410
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All DBs
Position
3:27725089..27737524
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AA seq
276 aa
AA seq
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MATAFKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSITTADGSALVKLGNTTVIC
GVKAELAAPTADSANKGYIVPNVEFPTLCSTRFRSGPPGEEAQAASQFIADVIENSQMIA
KEDLCIANGKLAWVLYCDIICLDYDGNILDASAFALLAALKSVQLPSVTINEETGSSEVD
LKQKKPLIIRKHPVATSFAVFDDTLLIVDPTAEEEDLATGTVTVVTDDEGRLCSVHKPGG
SPLTGAKLQDCITRAITRHKEVKKLIDKVIKSIKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggctttcaaaacggtggaaccattggaatattacagaaggtttttgaaagag
aactgccgtcctgatggaagggagttaggtgaattccgggcaaccactgtcaacattggt
tcaattacaactgcagatggttctgccttggtgaagttaggaaatactactgtgatttgt
ggagtcaaagcggagcttgctgcacccacagcagattctgctaataagggatatattgtt
ccaaatgtagaatttccaaccctctgttcaacacgatttcgctctggaccacctggtgaa
gaagctcaagcagcaagccagttcattgcagatgtgattgaaaattcacagatgatagca
aaagaagatctatgtattgcaaatggcaagcttgcttgggtgttatactgtgatatcata
tgtctggactacgatggaaacattttggatgccagtgcctttgctttgttagcagcgtta
aaaagtgttcagttgccatcagttactataaatgaagaaactggttcctcagaagttgat
ttaaaacagaagaagcctttgatcatccgaaaacatccagtggccacatcattcgctgta
tttgatgacactttactgattgttgatccaactgctgaagaagaggacttggcaactgga
acagtaacggttgtaactgatgatgaaggcagactctgttcagtccataaaccaggagga
agtcctcttacaggagccaagcttcaggactgcatcaccagagcaattacaagacacaaa
gaagtaaagaagctgatagacaaagtaataaaaagtataaagcccaagtga
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