Pogoniulus pusillus (red-fronted tinkerbird): 135191237
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Entry
135191237 CDS
T10504
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04270
Vascular smooth muscle contraction
ppus04625
C-type lectin receptor signaling pathway
ppus04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135191237 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
135191237 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
135191237 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135191237 (ARHGEF12)
Membrane trafficking [BR:
ppus04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135191237 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Ribonuc_2-5A
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
135191237
NCBI-ProteinID:
XP_064029441
LinkDB
All DBs
Position
38:complement(4097988..4182674)
Genome browser
AA seq
1542 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLVDSEVDLAAFGHMSPIMTSPHSP
GTAGNAERITSPVLVGEENNIVHNQKVEILRKMLQKEQERLQSLQEEYSRSHTTRLLKEI
QETKKHIPQLQEQLSKATGSAQDGVLSSRSVTESLQISEVEAESGDCVSKLDYSGDSPSR
PSSDIADSPRSGLKEQIYPDESPEKAEVQDTDCQTSVGSPLSRVGPQIIGAEDDDFDTEH
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFHQFFLDRAANLKVPVPEEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELSRLDAERVRDRNAVEKERACAEQIIAKIEEVLMTSQPLEEDRSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHLTTAASVSPEPPEPGKMRQSGSSSDGTDAPYPP
ANPMSPLAVGPFSSPEGSKDSEAGLKQTGEAPPASDSMDGTPRTPNNTFEFPSPLENLQE
EEGESERMVDMGTPKPFRKMDSVGFADVQSEDELCDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKRKIFSNLEDILGLHV
ALNDQMKAVRKRNETSVIDEIGEDLLSWFSGPAEEKLKHATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPKEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASGLQSPDKDLGLESPLILNAQSSSPIMSEKSK
VESLLVSDRQFDKVQQTDLTLKDSSACFEHTAGSLPSVSEGQWALDALRNLGLLKQLLVQ
QLGFAEKGPHEDWQRFPRFRTVSQEAQTESGNEPGLQHSDNNKLHQPGADRTLPRAGTDG
AAAGYGLRTSAESPASGDAMQLVGREPRPGSTLAIDHMGLNLEMATPELEGVGADESGEH
FFDAREAHSDENPSESELMERKEEEDVQIRISGNYLILDGYGTVQESSTDEEVSSLVLQC
TTGGHSSLDSAQQQPLSPRDTQSDGGSSPFAEEMMASRWGGVEESCSFTASPPFSLESRL
QMMQYIQKIEDDLEKLKEVEEDYTILRRQGLAGSASTGEHSD
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctacaatcacggacaggtttcctctcaaaaaacctacaagacac
ggcagcattctgagcagagagtctccagctgacaagaagcagaaggttgaacgctgcagt
agcacgcacgactttgatccaacagatagctcctccaagaagacaaagtctagctcggag
gagagtagatccgagacgtatggtcttgttcagcggtgtgtcgttatccagcgggatgag
aacggatttgggctgacagtcagcggagacaatccagtcttcgtgcagtccgtcaaggaa
gatggagcagccatgcgggctggagtgcaaacaggtgatagaattatcaaggtgaatggc
actctggtaacacactcaaaccatttggaggtggtaaagctgatcaagtcgggctcctat
gtagctctcactgttcaggggcgcccaccagggtcgccccagattccattagttgattct
gaagtggatctggcagcatttgggcatatgtctcccatcatgacatctccccattctcct
ggcacagcaggaaatgcagagaggatcactagcccagtgcttgtgggggaggaaaataat
attgtccataaccaaaaggtggagattctgaggaagatgctacagaaagagcaggagcgg
ctgcagtctctgcaggaagagtacagccgctcacataccacaaggctgctcaaggagata
caggaaacaaagaaacacattcctcagctgcaggagcagctgtccaaagccacaggctct
gctcaggatggagtcttgtcctccagatctgttacggaatcgctgcagatcagcgaggtg
gaggcagagagtggagactgtgtgagcaaactggattacagtggtgacagcccttccaga
ccaagcagtgacattgctgatagtcctcgcagtggcttgaaggagcagatttatccagat
gagagcccagaaaaggctgaggttcaagatactgattgccagaccagtgttggaagtcct
ttatcccgagtggggcctcagatcattggagcagaggatgatgactttgacactgaacat
gagcagattaatggacagtgcagctgtttccaaaacattgagctcctcaagtctcggcca
gctcacctggctgttcttctgcatcatgtggtgtcccagtttgaccctgcagcattgttg
tgctacctttacacagacttgtacaagcaaaccaactccaaagagactcgacgtgtcttc
cttgagttccaccagttcttcttggaccgagctgcaaatcttaaagttccagttccagaa
gaaatctccttagaactagacagaagaagaccagaactccttcctgaagagcttcaccgg
cagttcatacagaccatgcaggataaagtctgcccagaagttcagaggaatctggaagat
ttcaggcagaaacggagcatgggattgaccctggcagaaggagagctgagcaggctggat
gcagagcgtgtccgtgacaggaatgcagtggagaaggaaagagcatgtgcagaacagatc
attgctaaaattgaggaagtcttgatgacatctcagcctttggaagaagacaggagttcc
acaatgcaatatgtgatccttacttacatgaagcacctgggagtcaaagtgaaggagcct
cggaacctggagcagaagcgtggccggattggtttcttgccaaagatcaagcaaagcatc
aagaaggagaaagaaggagaggaaaaaggaaagaggagaggctttcctaatattctgggc
ccaccaaggagaccaagtcgacatgatagcagtgcaattggcagggccatggagatgcag
aagcctcgccacccaaagcacttaaccacagcagcttctgttagcccagagccaccagag
ccgggcaaaatgcgccagagtggctcctccagtgatggaacagatgcaccatacccacca
gccaacccaatgtctcctttggcagtgggtcccttttcttctccagagggaagcaaggac
agtgaagcaggtttgaagcagactggagaagctccacccgcaagtgactctatggacggc
acaccccgcacacctaataacacctttgaattcccatctcccttggagaacttgcaggag
gaggagggagaatcagagagaatggttgacatgggaacaccaaagccttttcgcaagatg
gacagcgttgggttcgcagatgtgcaaagtgaagatgagctctgtgattttgacatggac
atggaccctcccaactggcagcaacttgtgagcagagaagtcttgatggggctcaaaccc
tatgaaatcaagcgccaggaagtcattaatgagctcttttacaccgagagagctcacgtc
cgcacgctgaaggttctgcacaatgtcttctaccagcgtgtcaccagggagggcattctc
aactccagtgacaagaggaaaatcttctccaatctggaggatatccttgggcttcatgtt
gcattaaatgatcagatgaaagctgtccggaaaaggaacgagacctctgttattgatgag
attggggaagacttgctctcctggtttagtggaccagcagaggagaagctgaaacatgca
actgccactttctgcagtaaccagccctttgctctagaggtcatcaagtcacggcagaag
aaggattctcgcttccagaccttcgtgcaggatgctgagagcaatcccctgtgccgccgg
ttgcagctgaaggatatcattcccaaagagatgcagaggttgactaagtaccccctgctg
ctggataacattgctaagtacacagaacttcctgaagagaaagaaaaagtgaagaaagca
gcagatcactgtcgtcagatccttaaccacgtgaaccaggctgtcaaagagtctgagaac
aagcagcatttagaggattatcagcgtcgtcttgacctgtcctacttgaagcagtctgag
gatcccatgatggatgagttcaggaacttggacctaacaaagagaaaaatgcttcatgaa
ggacctctcacttggaaggttaatcgtgacaaaactattgatctctatactctgcttctg
gaggacattctggtgctgttgcagaaacaagatgataaactggtcctgaagtgtcacagc
aaaatcttggcatcaacagctgacagcaaacacaccttcagccccatcatcaaactcaac
acagttctggttcgtcaggtggcaacagataacaaagctttcttcgtcatctccatgtca
gaaaatggagctcacatttatgaactggtggcacagactgtttcagaaaagaatgtatgg
caggaccttatagctcagatggcagggactgtaaaaatggggagcagcagaagagtgatt
ccattaccacagtcaggacctggcgaagaagaacgtgaggaagaggagcaacagaagctc
aaggagcagcacgacattcctgccagtggcctacaaagtccagataaagatctgggcctg
gaatctcccttaatactgaacgctcagtcctcttcacccatcatgtctgagaagtccaag
gtagaaagtcttctagtgtcagacagacaatttgataaagtgcagcagacagacctgaca
cttaaagattcttctgcatgctttgagcacacagctggcagtttaccttcggtctcagaa
gggcagtgggcattggatgcattaaggaacttgggcctgctgaagcagttgttggtgcag
cagctcggcttcgctgagaagggcccccacgaagactggcagcgctttcccaggttcagg
accgtttctcaagaagcccaaactgaaagtgggaacgagcctggactgcagcactctgac
aacaacaaacttcatcagcccggagcagacagaacgctgccaagagccggcactgacgga
gccgcagccggttatggcctccggacttccgctgaatcgccagcttcaggggatgccatg
cagctggtggggagggagcccagaccgggcagtaccttggcaatagaccacatgggtctg
aacctggagatggcaaccccagagctggaaggggtgggtgctgatgaaagtggggagcat
ttctttgacgctcgagaagctcacagcgatgaaaatccctctgaaagcgaactgatggaa
aggaaagaggaagaggatgtgcaaatccggatctcaggaaattacttgatccttgatggg
tatggaacggtgcaggagagctccacagacgaggaggtgtcatctctcgttctccagtgc
accacaggtggccacagctctttggactctgcccagcagcagccactttccccacgggac
acccaatctgatggaggaagctccccttttgctgaggagatgatggcctcacgctggggt
ggggtggaagagtcctgctccttcactgcaagccctcccttctctctagagtcacgcctg
cagatgatgcagtacatccagaagatagaggatgaccttgaaaagttaaaggaggtggag
gaagactacaccattctccgacgccaagggctggctggctcagcctccacgggagagcac
tcagactaa
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integrated database retrieval system
