Pogoniulus pusillus (red-fronted tinkerbird): 135191359
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Entry
135191359 CDS
T10504
Symbol
SORT1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
135191359 (SORT1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Mo-co_dimer
Motif
Other DBs
NCBI-GeneID:
135191359
NCBI-ProteinID:
XP_064029653
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Position
39:complement(8071650..8082581)
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AA seq
798 aa
AA seq
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MGPRRAAGLALVLALAAAALGLREPARHRARLPRGSNGLAAAVAAVAGEGEACGGLRGDP
AALGNNTHQCVFDDLSGSVSLSWVGDNTGVILVLTTFQVPLVIMSFGQSKLYRSEDYGKT
FTDITELINNTFIRTEFGMAIGPGSSGKVILTGDVSGGSRGGRIFRSADFARSFVQTELP
FHPLLQLSYHPRRASLLLALSTENGLWVSRDFGASWQEIHRAVCLAKWGANNNIFFTTYL
NNSCKADLGLLELKRTNDLGRTFKVIGTKIYSFGLGGRFLFASVMTEKGTTRRIHVSLDQ
GESWSMAQLPSVGHEQFYSILAANDDLVFMHVDEPGDTGFGTIYTSDDRGIVYSKSLERH
LYTSTGGDTDFTNVTSLRGIYITSVLSPDNSIQSVITFDRGGQWMPLRKPKNTTCDSTAR
SKEECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGGAISVMSPDVYISDDGGY
TWARMLEGPHHYAILDSGGLIVAIQHTSQPVSVIQFSTDEGQCWYQYSFTSEPIFFTGLA
SEPGARSMNVSIWGFRGSFLARQWLSYTIDFGQLLSRPCEDKDYIIWLAHSSNSSDPSDG
CILGYKEQFRRLRKASLCHNGRDYAVGRQPSPCPCTLQDFLCDFGYFRPENRSECVEQPE
LRGHDLEFCLYGRQELLRTSGYRKIPGDKCVGGESPSREEKDMKKKCTSDLLSPGQLAAS
PSSMPIVLAVVAVLFVTAAASVLLVKKYVCGGRFLVHRYSVLRQHAEANGVEGLEGLGSA
SLATKGGYHDDSDEGLLE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcggcgggcggctgggctggcgctggtgctggcgctggcggcagcggcgctg
gggctgcgggagccggcacggcaccgggcacggctccctcgaggcagcaacggcctggcg
gcggcggtggcggcggtggcgggagaaggcgaggcctgcggcggcctgcgtggagaccca
gccgccctcggcaacaacacgcaccagtgtgtcttcgatgacctcagcggctccgtgtca
ctgtcctgggttggggacaacactggggtcatcctggtgctgaccacgttccaggtgccc
ctggtgatcatgagcttcgggcagtccaagctctaccgcagcgaggactacgggaagacc
ttcacggacatcacggagctgatcaacaacaccttcatccgcaccgagttcggcatggcc
atcggccccggcagctcgggcaaggtgatcctgaccggggacgtctcggggggcagccgc
gggggtcgcatcttccgctcggctgacttcgcccggagcttcgtgcagaccgagctgccc
ttccacccgctgctgcagctctcctaccacccccgccgcgccagcctgctgctggccctc
agcaccgagaacggcctctgggtctccagggactttggggcgagctggcaggagatccac
agagctgtctgcttggccaagtggggtgcaaacaacaacatcttcttcaccacctacctg
aacaactcctgcaaagctgacctggggctgctggagctgaagaggaccaacgacttgggc
aggaccttcaaggtcatcggcaccaagatctactccttcggcctcgggggtcgcttcctc
ttcgcctccgtcatgactgagaagggcaccaccaggcgcatccacgtctcgctggaccag
ggggagagctggagcatggctcagctgccctccgtcggccacgagcagttctactccatc
ctggcggccaacgacgacctggtcttcatgcacgtggacgagccaggggacacaggcttt
ggcaccatctacacctctgacgaccgtggcatcgtctactccaagtccctggagcgccac
ctgtacaccagcacgggcggggacacagacttcaccaacgtcacctccctgcgcggcatc
tacatcaccagtgtgctgtccccggacaactccatccagtctgtcatcacctttgaccgt
ggggggcagtggatgcccctgcggaagcccaagaacaccacctgtgactccacggccagg
agcaaggaggagtgcagtctccacatccacgcctcctacagcatctcgcagaagctcaac
gttcccatggctcctctctccgagcccaacgccgttggcatcgtcatcgcccacggcagc
gtggggggagccatctcggtgatgagccctgacgtgtacatctcggacgatgggggctac
acgtgggcacggatgctggaggggcctcaccactatgccatcctggactcgggggggctg
atcgtggccatccagcacaccagccagcctgtcagcgtcatccagttctccacggacgag
gggcagtgctggtaccagtacagcttcacctctgagcccatcttcttcaccgggctggcc
tcggagcctggcgcccgctccatgaacgtcagcatctggggcttccgcggcagcttcctg
gcgcggcagtggctgtcctacaccatcgacttcggccagctgctgagccgcccctgcgag
gacaaggactacatcatctggctggcacactccagcaacagcagcgaccccagcgacggc
tgcatcctgggctacaaggagcagttccggcggctgcgcaaggcctcgctctgccacaac
ggcagggactacgccgtgggcaggcagccctcgccctgcccctgcacgctgcaggacttc
ctctgtgactttggctacttccgccccgagaaccgctccgagtgcgtggagcagcctgag
ctgcgtgggcacgacctggagttctgcctctacgggcgccaggagctgctgcgcaccagc
gggtaccggaagatccccggggacaagtgcgtggggggggagagccccagccgggaggag
aaggacatgaagaagaaatgcaccagcgacctgctcagccccgggcagctggcagcgtcg
cccagctccatgcccatcgtgctggcagtggtggcagtgctgtttgtcactgctgctgcc
agcgtcctgctggtcaagaaatacgtctgcgggggcaggttcctggttcaccgctactcg
gtgctgcgccagcacgcggaggccaacggcgtggaggggctggaggggctgggcagtgcc
agcctggccaccaagggaggctaccatgatgactccgacgagggcctcctggagtga
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