Pogoniulus pusillus (red-fronted tinkerbird): 135191438
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Entry
135191438 CDS
T10504
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135191438 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135191438 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppus04147
]
135191438 (VPS36)
Membrane trafficking [BR:
ppus04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
135191438 (VPS36)
Exosome [BR:
ppus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135191438 (VPS36)
Exosomal proteins of colorectal cancer cells
135191438 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
BBL5
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
135191438
NCBI-ProteinID:
XP_064029811
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All DBs
Position
3:complement(30223420..30247928)
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AA seq
386 aa
AA seq
DB search
MDRFAWTTGLLELRETLVVQQRGVRLYDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
IPLSQVVFIEEQAAGIGKSAKIVVHLHPVSAIKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEMTQRRWETMPAGQTIQVNKDPWAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKLIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQRPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVASALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttcgcgtggactaccggattgctggagctgagggagacgctagtggtccag
cagcgtggcgtgcgcctctacgacggggaggagaaggtgaaatttgatagtggagtatta
ctacttagcacacacagactgatctggagggatcagaagaatcatgagtgctgtattgct
atacctctgtctcaggttgtctttattgaagagcaagctgctggcataggaaaaagtgct
aaaatagtagttcatcttcatcctgtgtctgcaatcaaggagcctggtccatttcaaagc
agcaaatattcctacatcaaactttctttcaaagaacatgggcagattgagttctataga
cgattatcagaagaaatgacacaaaggaggtgggagaccatgcctgctggtcagaccatt
caagttaacaaggatccgtgggcaggaagaataagggctgtaggaattgtagggatcgaa
aggaaattagaggaaaaaagaaaagagactgacaaaaacatttctgaggcttttgaagac
cttagcaagctgatggagaaggctaaggaaatggtggaattatccaaattgatagctaat
aagattaaagaaaaacaaggtgacatcactgaagatgagactattagattcaagtcttat
ctactgagtatgggtatagctaatccagttacaagggaaacatatggatccggtacacag
taccacatgcaactggcaaagcaactggctggaatactgcagagaccattagaggagcga
ggaggaatcatgtctcttacagaagtgtactgcctggtaaatcgtgcacgaggattagag
ttgctgtcaccagaagatttagtaaatgcttgcaagatgctggagtcactgaaattaccg
ttaagacttcggatatttgacagtggtgtgatggtgattgaactccagtctcataatgaa
gaggaaatggtagcttctgctttagagacagtgtctgaaaagggttctctcacagctgat
gagtttgccaagctggtggggatgtctgttctgttagccaaagaaaggctacttcttgct
gaaaagatgggccatctttgcagagacgattcagtggagggcttgagattctacccaaat
ttatttctgacacaaggctga
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