Pogoniulus pusillus (red-fronted tinkerbird): 135191616
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Entry
135191616 CDS
T10504
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040
Spliceosome
Brite
Enzymes [BR:
ppus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135191616 (DHX8)
Spliceosome [BR:
ppus03041
]
Complex C
Other components
Step II factors
135191616 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
GIPC1_GH2
AAA_22
PRP38_assoc
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
Transformer
PhoH
TsaE
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135191616
NCBI-ProteinID:
XP_064030150
LinkDB
All DBs
Position
40:3874821..3891305
Genome browser
AA seq
1193 aa
AA seq
DB search
MADPAAVEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNATFDTFKAVLQK
NGAEFTDSLISNLLRLIQTMRPPPKPSASRAETVVKPKSEKEKLKELFPALCRPDNPNIR
HMLDEDDVKVAADALKELEALMPSADRQGKQRSSDHRAKKKKRSRSRSRDRKRRHRSRSR
SRSRTWDKNRSKSRYRSRSRSRSRSRDRKDREKHLEKSSERWRDKHIDRPPPEEPSIGDI
YNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFT
GSKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLE
RKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPP
FLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNT
HWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPI
FRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVA
KRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEA
HERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEIL
YTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPEL
IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS
KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS
TVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEP
MLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLA
VYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAI
CSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTT
IDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccggcggcggtggaggagcttgcgaagctcgagtacctgtcgctggtctcc
aaggtgtgcaccgagctagacaatcacctgggcatcaacgacaaggacctcgctgaattt
gtgataaatctcgctgagaaaaatgctacatttgacaccttcaaagcggttcttcaaaag
aatggtgctgagttcactgattcccttattagtaacctgctgcgtcttatccagaccatg
cggccgcccccaaagccatctgcaagcagagcagagactgttgtcaagcccaagtcagag
aaggaaaagctgaaggagttgtttccagccctttgcaggccagacaatcccaacatcagg
cacatgctggatgaagatgatgtgaaagtggcagctgatgcacttaaggagctggaagct
ctgatgccgagtgcagacaggcaaggcaagcagaggagcagcgaccaccgggcaaagaaa
aagaagaggagccgaagccgtagcagggacagaaaacgaaggcacagatctcgctccagg
tctcgttctagaacttgggataagaacaggagcaaatctagataccggtcccggagcagg
agtcggagtcgcagcagggaccgtaaggatcgagagaagcaccttgagaagagcagcgag
agatggagagacaagcacatagaccgtccgccgcccgaggagccttccatcggagacatc
tacaacggcaaagtcacaagcatcatgcagttcgggtgctttgtgcagctggaggggctg
aggaagcgttgggagggcctggtacacatctcggaacttcggagagagggacgggttgcc
aatgttgctgatgttgtgagcaaaggacaaagagtcaaagtcaaagtgttatcctttact
ggatccaaaaccagcctcagcatgaaggacgttgatcaagacactggggaagacttgaac
ccaaaccggaggagaaacctggttggagaaaccaatgaagagacctccatgagaaaccca
gacagacccagtcacctgtccctggtgaatgccccagaggtggaggacgacagcctggaa
cggaagcgcctgacccgaatttcagacccagagaaatgggagattaaacagatgattgca
gctaatgtgctttccaaggaagaatttcctgactttgatgaggagactgggatccttcct
aaagttgatgatgaggaagatgaggaccttgagattgagttagttgaagaagagccacca
ttccttcgaggtcacactaaacagagcatggatatgagccctatcaaaatagtaaagaat
ccagatggttccttgtcccaggctgcaatgatgcagagtgctttagctaaagaaagaaga
gaacttaagcaagcccagagagaagcggagatggactctatccccatgggactcaacaca
cactgggtggatcctctccctgatgtggatggaagacaaatagctgctaacatgcgagga
attgggatgatgcccaatgatatcccggagtggaagaagcatgcatttggtggcaacaaa
gcttcttatgggaagaagacccagctttccatcattgagcagagagagagtctgcctatc
ttcagactgaaggagcagctgatacaggctgtgcatgacaatcagattctgattgttatt
ggagagacaggatctgggaagacaacacagattacccagtacctggctgaggcagggtac
acgtcaagaggcaagattggatgtactcagccccgcagagtggctgccatgtctgttgca
aagagggtgtcagaagaatttggttgctgcttgggacaagaggttggctacaccattcga
tttgaggactgcaccagccctgagactgtcatcaaatacatgacagatgggatgttgttg
agggagtgtctcatagatcctgatctgacccagtatgccattatcatgttggatgaagcc
cacgagaggaccatacatacagatgtgctctttggacttctgaagaagacggtgcagaag
cggcaggacatgaagctgatcgtgacatcggcgaccctggatgctgtgaagttctctcag
tacttctatgaagcaccaatcttcacaattcctggcaggacatacccagtagaaattcta
tacacaaaagagccagaaacagattatttagatgccagtctgattacagtaatgcaaatc
cacttaacagagccaccaggtgacattttagtgtttctaactggccaggaagagattgac
actgcctgtgaaatcctctatgagaggatgaaatctctaggacctgatgttccagagtta
attatcctaccagtatattcagctttacccagtgaaatgcagaccaggatctttgaccca
gcccctccagggagcagaaaggttgtcatcgccacaaacattgctgagacctctctgact
attgatgggatctattatgtggtggatcctggctttgtgaagcagaaagtctataactcc
aagactgggattgaccagctggttgttacccccatttcacaggctcaagccaagcagcga
gcaggaagggctgggaggacggggccaggaaaatgctacaggctgtatacagagcgcgct
taccgggatgaaatgctgaccaccaacgtgcctgaaatccagaggacaaatctggccagc
acagtgctttccctgaaggccatgggcatcaatgatttgctctcctttgactttatggat
gctcccccaatggaaactcttataaccgccatggagcagctgtacaccctgggggctctg
gatgatgagggactgctcactcgacttgggcgcaggatggcagaattccccttggagcca
atgttgtgtaagatgctgatcatgtctgtacacctgggatgcagtgaggaaatgctgacc
atagtctccatgctgtctgtgcagaatgtgttctacaggccaaaggataaacaagcactt
gctgatcaaaagaaagccaagttccatcagacagaaggtgaccacctcactctcctggct
gtttacaactcctggaagaacaacaagttttcaaacccctggtgctatgaaaacttcatc
caagcccgatccttgcgcagggctcaggacatccgcaagcagatgttgggcatcatggac
aggcacaaactggatgtggtgtcctgtgggaaggcaacagttcgagtccagaaagccatc
tgcagtggcttcttccgaaatgcagccaagaaggatccccaggaggggtatcggacactc
attgatcagcaggtggtctacatccacccatccagtgctctcttcaacaggcagccagag
tgggtggtgtatcatgagctggtgctgaccaccaaggagtacatgcgtgaagtgaccact
atagatcctcgctggctggtggagtttgctccagctttcttcaaggtttctgacccaacc
aagctgagcaaacagaagaagcagcagcggctggagcctctgtacaatcgctacgaggag
cccaacgcctggaggatctcgcgggccttcaggcggcgctga
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integrated database retrieval system
