Pogoniulus pusillus (red-fronted tinkerbird): 135191734
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Entry
135191734 CDS
T10504
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135191734 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppus01009
]
135191734 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppus04515
]
135191734 (PCDH20)
Protein phosphatases and associated proteins [BR:
ppus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135191734 (PCDH20)
Cell adhesion molecules [BR:
ppus04515
]
Cadherins
Protocadherins
135191734 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
135191734
NCBI-ProteinID:
XP_064030363
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All DBs
Position
3:40916009..40921977
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AA seq
915 aa
AA seq
DB search
MGPPGGRGSTTARGNLQHLLLFLLFLGPFNCFASYSRATELFYSLNEGLPAGVLIGSLAR
DLRLPAAFGQHPAATQPPLSFTLASRGLGGQYVQLDNHSGDLHTSAVEIDREALCVESSE
ATIIGAEAAVSSSSPSSESCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPHFPVPHICL
SVPENSPVNTRLAIEHPALDPDVGTNSVQTYRLRENYGVFTLDVEENESGERTPYLIVMG
SLDRETQEEYVTVIVAEDGGTPPLMGSATLTIGISDINDNCPQFNDSQLNITLYGNSSLG
SQVATVCAVDLDLGSNAQITYSYSQKVSQPSRELFHLDENTGAITLSSKIDGDTPRHHRL
IILGNGPGCIPAVITVLVTIIKVMMRPPEVVPRFIANEVEGVVYLKELEPINTPIAFFTI
KDPDEKYKVNCYLDGDGPFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFH
VNKIIKVQILDDNDNSPVFSQQLIELSIEENNVPNAFLTKLHATDADSGERGRVSYFLGP
DAPSYFALDKTTGVLTVSTQLDREEKEKYRYTVKAVDSGFPPRESIATVTITVLDKNDNS
PRFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRA
KVSLDREQQSSYVLWIEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLP
STLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFSIDPKTGNITLEESLMQNDYG
LYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRREPDISIEEKQPQISIEP
THKKIEPASCMPTLIALSVISLGSIALVTGMGIYICLRKGKKHHRADENLEVQIPLNGRI
NLHMLEKKPVEISNI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggggcctccgggcggtcgcggcagcaccaccgcccgtggcaatctgcagcacttgctc
ctttttctgctcttccttggaccattcaactgctttgccagttacagccgtgccaccgag
ctcttctacagcctcaacgaggggctgcctgctggagtgctcatcggcagcttggcccgt
gacctgcggttgccagcagcttttgggcaacaccctgcagccacccagccccctctttcc
ttcactctggcctcccgtggcttggggggacagtatgtgcagctggacaatcactctggg
gatctgcacacctcggctgtggagattgaccgggaagctctgtgcgtagagagcagtgag
gccaccatcatcggggcagaagctgcagtctcctcttcctcaccctcatctgagtcatgc
ctgctgctgctggatgtgctggtgctaccacaggagtatttccgcctggtgaaggtaaaa
attgctatccgggatgtcaacgacaatgcaccccacttccctgtgccccacatctgcctc
tcggtgcctgagaattcacctgtgaacacccgcctggctattgagcaccctgcccttgac
cctgatgtgggaaccaacagtgttcagacctaccgtctacgagagaactatggtgtcttc
accctggatgtggaggagaatgagagtggagaaaggactccctacctgattgttatggga
tctctggacagagagacacaggaggagtatgtcacagtcattgttgctgaggatggagga
actcctccactcatgggcagtgcaaccctcactattggcatcagtgacatcaatgacaac
tgcccccagttcaacgactctcagctcaatatcaccctttacggaaattccagtctagga
tcacaagtggccactgtctgtgcggtagacttggacctcggatccaatgctcagatcacc
tactcctacagccagaaggtctcccagccatccagagaattgttccatctggatgaaaac
acaggagccatcacactctccagtaaaattgatggggacactccaaggcaccacaggctg
atcatactgggcaatggtccaggttgtatcccagctgtgatcacagtgctagtgaccatc
atcaaagtcatgatgagaccacctgaagttgtccctcgtttcatagctaatgaagtggaa
ggggtggtgtacttaaaggaactggagcccatcaacacaccaatagcattttttaccatc
aaagaccctgatgaaaaatacaaagtgaactgctatttggatggtgatgggcctttcaga
ctttcaccatacaagccatacaataatgaataccttttagagaccacaaagcctttggac
tatgagacacagcagctatatgagatctccgtagttgcgtggaactccgaagggtttcat
gtcaacaaaataatcaaagtacagattctggatgacaacgacaactcaccagttttctct
caacagctgatagagttatccatcgaggagaacaatgttcccaatgctttcctcaccaaa
ctgcatgctactgatgctgacagtggagaaaggggacgggtgtcctatttcttaggtcca
gatgccccttcctattttgctttagataaaaccacaggagttcttacagtttccacccaa
ttggaccgagaagaaaaagagaaatacagatataccgtcaaagcagtagattctgggttc
cctccaagagaatcaatagcaactgtcaccatcactgtgttggataaaaatgataatagc
ccaagatttatcaataaggatttcagcttttttgtgccagaaaacttcccaggttttggt
gaaattggagttataagcgtcacagatgctgatgcaggacagaatggatgggttgccctt
tcagttctgaatggaagtgatatttttgtcatagatactggtaaaggagttttaagagca
aaagtctccctggacagggagcagcaaagttcctatgttctgtggattgaagcagttgat
ggtggtgatcctgctttgtcttcaacagcaaaaataactattcttcttctggacataaat
gacaacccccccttagtcttgtttcctcagtctaatatgtcttatttgttggtccttcca
tccacccttcctggctctcccatcactgaggtctacgctgttgataaggacactggcatg
aatgcagtcatagcttacagcataataggaagaagaggccctcgaccagagtcatttagc
atcgaccctaaaactggtaatatcaccttggaagagtcgctgatgcaaaatgattatggc
ctctatcggctgctggtaaaagtcagtgatcacggctatccagaacctctccattccact
gtcatggtgaacctttttgtcaatgacactgttagcaatgagagctacattgaaagtttg
ttaagaagggagcctgatatcagtatagaagaaaagcagccacaaatatctatagagccc
acacataaaaaaatagagccagcatcctgcatgcctaccttgatagctctctcagtaata
agcttgggttcaattgcattagtgacagggatgggcatttacatctgtctgagaaaaggg
aaaaagcatcacagagctgatgaaaacttggaagtacaaatcccattaaatggaagaatt
aacctgcacatgttggaaaagaaaccagtggagatttctaacatttga
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