KEGG   Pogoniulus pusillus (red-fronted tinkerbird): 135192016
Entry
135192016         CDS       T10504                                 
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ppus  Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03018  RNA degradation
ppus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135192016 (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135192016 (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppus03019]
    135192016 (LSM7)
   03041 Spliceosome [BR:ppus03041]
    135192016 (LSM7)
Messenger RNA biogenesis [BR:ppus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135192016 (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     135192016 (LSM7)
Spliceosome [BR:ppus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    135192016 (LSM7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 135192016
NCBI-ProteinID: XP_064030875
LinkDB
Position
41:complement(749108..754424)
AA seq 117 aa
MANVGSGGGGGGGKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNL
VLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcgaacgtgggcagcggcggcggcggcggcggcgggaagatggcggacaaggagaag
aagaagaaggagagcatcctggacctgtccaagtacatcgacaagaccatccgcgtgaag
ttccagggcggcagggaagcaagtggtgtcctgaaaggctttgaccccctgctgaacctg
gtgctggatggaaccatcgagtacatgcgagaccctgatgatcagtacaagctgacggag
gacacaaggcagctgggactggtggtctgcagaggcacttctgtggttctcatctgtccc
caggatgggatggaagcaattcccaaccccttcattcagcagcaggatggatga

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