Pogoniulus pusillus (red-fronted tinkerbird): 135192435
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Entry
135192435 CDS
T10504
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135192435 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppus03041
]
135192435 (USP39)
Spliceosome [BR:
ppus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
135192435 (USP39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
135192435
NCBI-ProteinID:
XP_064031628
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Position
42:21697..47711
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AA seq
600 aa
AA seq
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MASRGKREREPRAAPRGTAGASLSSSSSSSSSSSSSRASSRSRHEGDAERSRGRRDGERE
RGRREAAAAAAGLALPLPVDPARIKREPGSGSGTWERSVPSGGSVRVKREREPDGDSDPE
PEPTVRYGRFDPEDQRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQG
RGLRSHAYIHSVQLSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTAQQIANL
DKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYSSIQRP
PGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSW
FLNALHSALGGTKRKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKAQLLQNSEYQELMVE
SSFMYLSLDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGATEKEYKTYKENFLKRFQLTR
LPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLAEEAQAAHPNTTYDLVANIVH
DGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRREEDETKQQGA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccgcgggaagcgggagcgggagccgcgggcagccccgaggggcacggccggt
gccagcctctcctcctcgtcttcttcctcctcctcctcctcctcatcgcgggcctcgtcc
cgcagccgccacgaaggggatgcggagcggtcccgcggcaggcgggatggggagcgggaa
cgcgggcggcgggaggcggcggcggcggccgcgggtttagcgttgccgttgccggtggat
cccgctcggatcaagcgggagcccgggagtgggagcggtacctgggagcgttcggtcccc
tcgggcgggtcggtgcgggtcaaacgtgaacgtgagcctgatggagactccgacccggag
ccggagcccaccgtccgctacggccgcttcgaccccgaggatcagcgcagcagacactgc
ccctacctggacaccatcaacaagagtgtgctggactttgacttcgagaagctctgctcc
atctccctgtcccacatcaacgtctatgcctgcctggtctgcgggaagtacttccagggc
cgggggctgcgctcccatgcctacatccacagtgtgcagctcagccaccatgtcttcctc
aacctgcacaccctcaagttctactgcctgcctgacaactacgagatcatcgactcctcc
ctggaggacatcacgtacgtgctgaagccaaccttcacggcgcagcagattgccaacctg
gacaagcaggccaagctgtcgcgggcatacgatggcaccacctacctgcctggcatcgtg
gggctcaacaacatcaaagccaacgactatgccaacgccgtgctgcaggccctctccaat
gtgccccccctgaggaactacttcctggaggaggagaactacagcagcatccagaggccc
cccggggacatcatgttcctgctggtgcagcgcttcggggagctgatgaggaagctctgg
aaccccaggaacttcaaggcccacgtcagcccccacgagatgctgcaggctgtggtgctc
tgcagcaagaagaacttccagatcaccaagcagggggacggagtcgatttcctctcctgg
ttcctcaacgccctgcactcggccctggggggcaccaagaggaagaagaagaccatcgtc
accgatgtcttccagggctccatgcgcatcttcaccaagaagctgccacacccagacctg
ccagcagaggagaaggctcagctgctgcagaactctgagtaccaggagctgatggtggag
tcctccttcatgtacctgagcctggacctgcccacggcgccgctctacaaggacgagaag
gagcagttgatcatcccccaggtgcctctcttcagcatcctggccaagttcaatggggcc
actgagaaggagtacaagacctacaaggagaacttcctgaagcgcttccagctcaccagg
ctgcctccctacctcatcttctgcatcaaacgtttcaccaagaacaacttcttcgtggag
aagaacccaaccattgtcaacttccccatcacgaacgtggacctgcgagagtacctggca
gaggaggctcaggctgcccaccccaacaccacctacgacctggtggcaaacatcgtccac
gatgggaagccctcggagggctcctaccgcatccacgtcctgcaccacggcactggcaag
tggtatgagctgcaggacctgcaggtcacagacatcctgccccagatgattaccctctct
gaggcttacatccagatctggaagcgccgagaggaagatgagaccaagcagcagggagcc
tga
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