Pseudomonas putida H8234: L483_00485
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Entry
L483_00485 CDS
T02706
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput
Pseudomonas putida H8234
Pathway
pput02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L483_00485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pput03021
]
L483_00485
Transcription machinery [BR:
pput03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L483_00485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
HTH_23
Sigma70_r4
GerE
HTH_11
HTH_29
HTH_Tnp_ISL3
HTH_40
HTH_24
MPAB_Lcp_cat
HTH_28
HTH_7
HTH_36
HTH_10
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
AGN77266
LinkDB
All DBs
Position
complement(97963..98466)
Genome browser
AA seq
167 aa
AA seq
DB search
MPSNDSVQTLYSDHHGWLHAWLRSKLGNAADAADLAHDTFVRLLQRREHLQLNTPRAFLR
TVARGLIIDHWRREELHRAYLEALAHVPEAQSPSAETRELLLELLERIARMLDGLKPKVR
RAFLLAQCEGLKHQAIAEQMGISVRTVERYIADALYHCYVLRYEDEC
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaatgactccgtgcaaacgctctacagtgaccaccacggttggttacacgcc
tggctacgcagcaagctgggcaatgccgccgatgccgcagacctggcccatgacaccttc
gtccgcttgctgcaacgccgcgaacacctgcagctaaacacccctagggccttcttgcgc
acggtagcccgtgggctgatcatcgatcactggcgccgcgaggagctgcaccgggcctac
ctggaggcattggcccatgtgccggaagcacagtctccatcagccgaaacccgcgagctg
ctgctggagttgcttgaacgtattgcgcgcatgctcgacggcctcaaacccaaggtacgt
cgcgccttcctcctggcccaatgcgaggggctgaagcatcaggccattgccgagcagatg
gggatctcagtgcgtacggtggagcgttacatcgctgatgcgctctaccattgctatgtg
ctgcgctatgaagacgagtgttga
DBGET
integrated database retrieval system