Pseudomonas putida H8234: L483_01800
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Entry
L483_01800 CDS
T02706
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput
Pseudomonas putida H8234
Pathway
pput02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L483_01800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pput03021
]
L483_01800
Transcription machinery [BR:
pput03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L483_01800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
MerR
HTH_24
Sigma70_ECF
HTH_17
HTH_29
HTH_11
Sigma70_r3
HTH_3
PhyR_sigma-like
HTH_28
Phage_terminase
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AGN77465
LinkDB
All DBs
Position
complement(391523..392041)
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AA seq
172 aa
AA seq
DB search
MSSAQSPHADLVGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGRDQLDTPREP
RAFLAAVAKGLMFDHFRRAALEQAYLAELALIPEAEHPSPEALHLILEDLKAIDRLLGKL
SSKARAAFLHNRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttctgcacagagcccacacgccgatctggtcggtgcgctgtaccgcgaccaccgc
ggctggctgctcgcctggctgcaacgcagcatggcctgtcgccaacgtgccgaagacctg
agccaggacaccttcgtgcgcctgctcggccgtgaccagctggatacgccccgcgaaccc
cgcgcctttctggccgccgtggccaaggggctgatgttcgaccatttccgccgcgccgca
ctggaacaggcctacctcgccgagctggcactgatcccggaagccgaacacccctcaccg
gaagcgctgcaccttatccttgaagacctcaaagccatcgaccgcctgctcggcaagctg
tcgagcaaggcccgcgcagcgttcctgcacaaccgcctggacggcatgggccatgccgaa
atcgcagagcgcctgggcgtttcagtatcacgggtgcgccagtacatcgcccaaggcatg
cgccagtgctatgtggccctgtacggggagccgacgtga
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