KEGG   Pseudomonas putida H8234: L483_03590
Entry
L483_03590        CDS       T02706                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput  Pseudomonas putida H8234
Pathway
pput02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pput00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L483_03590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pput03021]
    L483_03590
Transcription machinery [BR:pput03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L483_03590
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 PhyR_sigma-like HTH_11 HTH_23 HTH_DeoR HTH_7 HTH_29 HTH_6 HTH_40 HTH_28 HTH_38 HTH_IclR HTH_20 HTH_31 GerE HTH_22
Other DBs
NCBI-ProteinID: AGN77746
LinkDB
Position
complement(765275..765790)
AA seq 171 aa
MQINDTFKPTEVALLYQAHHSWLRGWLRNRVGCSEHAADLAQDTFVRLLRARQVSPLKEP
RAYLSSIARGLMIDQFRRRALEHAYQQSLAHLPEAEAPSEEHRLVILDALDRLDRALNQL
KPRVRQAFLLAQLDGLSIVQIAQQLEVSRATVERDLAKALGVCYRLRYADA
NT seq 516 nt   +upstreamnt  +downstreamnt
atgcagatcaacgacacgttcaagccgaccgaggtcgctctgctctatcaggcccaccat
agctggcttcgcggctggttgcgcaaccgggtggggtgcagcgagcatgcggccgacctg
gcccaggacaccttcgtgcggctattgcgggcccgccaggtttcgccgcttaaagagcca
cgcgcctatctcagcagcatcgcccgtggcctgatgatcgaccagttccgccgtcgcgca
ctggaacacgcctaccagcaaagtctggcccacctgcccgaagccgaggcacccagcgaa
gagcaccggctggtcattctcgatgccctggaccgcctcgaccgtgccctgaaccagctc
aagccgcgtgttcgccaggcgtttctgctggctcaactggacggcttgagcatcgtgcag
atcgcccagcagctggaagtgtcgcgggccaccgtcgagcgggacctggccaaagccttg
ggtgtctgctaccggttgcgttacgccgatgcatga

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