Pseudomonas putida H8234: L483_03590
Help
Entry
L483_03590 CDS
T02706
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput
Pseudomonas putida H8234
Pathway
pput02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L483_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pput03021
]
L483_03590
Transcription machinery [BR:
pput03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L483_03590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_11
HTH_23
HTH_DeoR
HTH_7
HTH_29
HTH_6
HTH_40
HTH_28
HTH_38
HTH_IclR
HTH_20
HTH_31
GerE
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AGN77746
LinkDB
All DBs
Position
complement(765275..765790)
Genome browser
AA seq
171 aa
AA seq
DB search
MQINDTFKPTEVALLYQAHHSWLRGWLRNRVGCSEHAADLAQDTFVRLLRARQVSPLKEP
RAYLSSIARGLMIDQFRRRALEHAYQQSLAHLPEAEAPSEEHRLVILDALDRLDRALNQL
KPRVRQAFLLAQLDGLSIVQIAQQLEVSRATVERDLAKALGVCYRLRYADA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaacgacacgttcaagccgaccgaggtcgctctgctctatcaggcccaccat
agctggcttcgcggctggttgcgcaaccgggtggggtgcagcgagcatgcggccgacctg
gcccaggacaccttcgtgcggctattgcgggcccgccaggtttcgccgcttaaagagcca
cgcgcctatctcagcagcatcgcccgtggcctgatgatcgaccagttccgccgtcgcgca
ctggaacacgcctaccagcaaagtctggcccacctgcccgaagccgaggcacccagcgaa
gagcaccggctggtcattctcgatgccctggaccgcctcgaccgtgccctgaaccagctc
aagccgcgtgttcgccaggcgtttctgctggctcaactggacggcttgagcatcgtgcag
atcgcccagcagctggaagtgtcgcgggccaccgtcgagcgggacctggccaaagccttg
ggtgtctgctaccggttgcgttacgccgatgcatga
DBGET
integrated database retrieval system