Pseudomonas putida H8234: L483_07165
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Entry
L483_07165 CDS
T02706
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pput
Pseudomonas putida H8234
Pathway
pput03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L483_07165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pput03400
]
L483_07165
DNA repair and recombination proteins [BR:
pput03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L483_07165
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L483_07165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
HAMP
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGN78335
LinkDB
All DBs
Position
1549437..1551452
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AA seq
671 aa
AA seq
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MSEFQLVTRFQPAGDQPEAIRQMVEGIEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPESYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVFRKLPRF
TFYPKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMIMELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRMPSALDNRPMRFDEWEDVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
VEIRPALTQVDDLLSEIRKRVAVGERVLATTLTKRMAEDLSDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNITGSMQRAIDETERRREKQIAFNEANGIVPKGVVKDITDIMEGATV
PGARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQLARDLEFEAAAQLRDE
ITQLRERLITS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacccgttttcagccggccggcgaccagcccgaggccatc
cgtcagatggtcgaaggcatcgaagcggggctgtcgcaccagacgctgctcggcgtgacc
gggtcgggcaagaccttcagcatcgccaacgtcatcgcgcaggtgcagcgcccgacactt
gtcctcgcaccgaacaagaccctggccgcgcagctctacggcgaattcaaggcgtttttc
cccaacaacgcggtggagtatttcgtttcctactacgactactaccagcccgaggcctac
gtaccatcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccacatcgagcag
atgcgcctgtccgcgaccaaggcgctgctggagcggcgcgatgcaatcatcgtcaccacc
gtgtcttgcatctatggcctcggcagccccgagtcctacctgaaaatggtcctgcatgtg
gaccgcggcgacaagctcgatcagcgcgcactgctgcgccgcctggccgacctgcagtac
acccgcaacgaaatggactttgcccgtgccactttccgcgtgcggggtgatgtgatcgat
atcttcccggccgagtcggacctagaggccatccgcatcgagctgttcgatgacgaggtg
gagaacatagccgccttcgacccgctcactggcgaggttttccgcaagctgccgcgattc
accttctaccccaagagccactacgttaccccgcgggaaaccctgctggaggccgtggag
ggcatcaaggaagagctcaaggagcgccttgagtacctgcacaaggccaacaagctggta
gaagcgcaacgcctggagcagcgtacccgcttcgaccttgagatgatcatggagctgggc
tactgcaacggcatcgagaactattcacgctacctgtccgggcgcccggccggggcgcca
ccacccaccctgtacgactacctgccagccgatgcgctgctggtcatcgacgaatcccac
gtcagcgttccgcaggtaggcgccatgtacaagggcgaccgttcgcgcaaggaaaccctg
gtcgaatacggcttccgcatgccttcggcactggacaaccggccgatgcgcttcgacgaa
tgggaagacgtcagcccgcagaccatcttcgtctccgcgaccccgggcccctatgaggct
gagcatgccgggcgcgtggtggagcaggtcgtgcgcccgaccggcctggtcgacccgcaa
gtcgagatacgcccggcactgacccaggtagacgacctgctgtcggaaatccgcaagcgc
gtggcggtgggggagcgggtgctggccactacgctgaccaagcgcatggccgaggacctt
tccgattacctcgccgaccacgatgtgcgggtgcgctacctgcactcggacatcgacacg
gtggagcgggtggagatcatccgcgacctgcgcctgggtaccttcgatgtgctggtgggc
atcaacctgctgcgcgaaggcctggacatgccagaagtgtcgctggtggcgattctggat
gcggacaaagaaggttttctgcgttccgagcgctccctgatccagaccattggccgtgct
gcgcgtaacctcaatggccgggcgattctgtacgccgacaatattaccggctcgatgcag
cgggcaattgacgaaaccgagcgacgccgggaaaagcagatcgctttcaacgaagccaac
ggtatcgtgcccaagggtgtggtcaaggacatcaccgacatcatggaaggcgctaccgtg
cccggcgcgcgcagcaaaaagcgcaagggcatggccaaggcggcagaggagagcgcccgc
tatgaggcagagctgcgtacaccgggcgagatcaccaagcgcatcaagcagctggaagag
aagatgatgcagctcgcccgcgacctggagttcgaagctgcggcgcagctgcgcgacgag
attacccagctgcgcgagcggttgattaccagctga
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