Pseudomonas putida H8234: L483_07625
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Entry
L483_07625 CDS
T02706
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput
Pseudomonas putida H8234
Pathway
pput02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L483_07625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pput03021
]
L483_07625
Transcription machinery [BR:
pput03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L483_07625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_20
Sigma70_ECF
HTH_31
HTH_23
HTH_28
HTH_Tnp_4
Xre-like-HTH
HTH_40
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AGN78399
LinkDB
All DBs
Position
complement(1651122..1651622)
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AA seq
166 aa
AA seq
DB search
MSTLDPQALHQLYSENNSWLKGWLRARLGNAADASDLAHDTFLRVMTARNPLPIREPRSY
LSAIARALLIDKARRRSIEKAYLQALALRPEPVDVSPEVRLSIIEMLVAVDSLLDELGAK
TRAIFLAVQLEGLTYGAAAERFGVSVTTVKNHLIKAMTRCLLVVEG
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgctcgatccccaggccctgcaccagctgtacagcgaaaacaacagctggctg
aagggctggctgcgcgcccgcctgggcaacgccgccgatgcttccgacctggcgcacgac
acgttcttgcgggtaatgaccgcgcgtaatccgttgccgatccgcgagccgcgcagctac
ctcagcgctatagcccgcgcgctgctgatcgacaaagcccgccgtcgctccatcgaaaaa
gcctacctgcaagccctggccctgcgcccggagccggttgacgtctcgccggaggtgcgc
ttgtccatcatagaaatgctggtggccgtggacagcctgctcgacgaactcggcgccaag
acccgcgccattttccttgccgttcaacttgaaggcctgacctacggtgctgcggctgag
cgtttcggcgtgtcggttaccaccgtgaagaaccacctgatcaaggcgatgacccgctgc
ctgctggtagttgaaggctga
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integrated database retrieval system