KEGG   Pseudomonas putida H8234: L483_07625
Entry
L483_07625        CDS       T02706                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput  Pseudomonas putida H8234
Pathway
pput02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pput00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L483_07625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pput03021]
    L483_07625
Transcription machinery [BR:pput03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L483_07625
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_20 Sigma70_ECF HTH_31 HTH_23 HTH_28 HTH_Tnp_4 Xre-like-HTH HTH_40 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: AGN78399
LinkDB
Position
complement(1651122..1651622)
AA seq 166 aa
MSTLDPQALHQLYSENNSWLKGWLRARLGNAADASDLAHDTFLRVMTARNPLPIREPRSY
LSAIARALLIDKARRRSIEKAYLQALALRPEPVDVSPEVRLSIIEMLVAVDSLLDELGAK
TRAIFLAVQLEGLTYGAAAERFGVSVTTVKNHLIKAMTRCLLVVEG
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtcgacgctcgatccccaggccctgcaccagctgtacagcgaaaacaacagctggctg
aagggctggctgcgcgcccgcctgggcaacgccgccgatgcttccgacctggcgcacgac
acgttcttgcgggtaatgaccgcgcgtaatccgttgccgatccgcgagccgcgcagctac
ctcagcgctatagcccgcgcgctgctgatcgacaaagcccgccgtcgctccatcgaaaaa
gcctacctgcaagccctggccctgcgcccggagccggttgacgtctcgccggaggtgcgc
ttgtccatcatagaaatgctggtggccgtggacagcctgctcgacgaactcggcgccaag
acccgcgccattttccttgccgttcaacttgaaggcctgacctacggtgctgcggctgag
cgtttcggcgtgtcggttaccaccgtgaagaaccacctgatcaaggcgatgacccgctgc
ctgctggtagttgaaggctga

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